FFCP PHASE1:Mm9::chr6:99216375..99216395,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108655|HGNC=|UniProt=P58462|association_with_transcript=99bp_to_ENSMUST00000113322,ENSMUST00000113326_5end|description=CAGE_peak_5_at_Foxp1_5end|id=chr6:99216375..99216395,-|ontology_enrichment_celltype=CL:0000838!2.68e-10!12;CL:0000084!1.09e-09!11;CL:0000827!1.09e-09!11;CL:0000542!5.23e-09!13;CL:0000051!5.23e-09!13;CL:0000791!2.27e-08!9;CL:0000789!2.27e-08!9;CL:0002420!2.27e-08!9;CL:0002419!2.27e-08!9;CL:0000790!2.27e-08!9;CL:0000624!1.38e-07!8;CL:0000988!2.88e-07!32;CL:0002032!2.88e-07!32;CL:0000037!2.88e-07!32;CL:0000566!2.88e-07!32;CL:0000837!2.88e-07!32|ontology_enrichment_celltype_v019_2=CL:0000838,5.32e-19,12;CL:0000084,8.75e-18,11;CL:0000827,8.75e-18,11;CL:0000542,2.94e-17,13;CL:0000051,2.94e-17,13;CL:0000791,3.74e-15,9;CL:0000789,3.74e-15,9;CL:0002420,3.74e-15,9;CL:0002419,3.74e-15,9;CL:0000790,3.74e-15,9;CL:0000624,1.36e-13,8;CL:0000738,2.34e-12,17;CL:0002087,2.34e-12,17;CL:0002031,4.68e-12,25;CL:0000988,9.30e-11,32;CL:0002032,9.30e-11,32;CL:0000037,9.30e-11,32;CL:0000837,9.30e-11,32;CL:0000893,1.45e-10,6;CL:0002489,1.45e-10,6;CL:0000898,1.45e-10,6;CL:0000809,1.45e-10,6;CL:0000810,1.45e-10,6;CL:0000895,1.45e-10,6;CL:0000808,1.45e-10,6;CL:0000894,1.45e-10,6;CL:0000806,1.45e-10,6;CL:0000807,1.45e-10,6;CL:0000805,1.45e-10,6;CL:0002425,1.45e-10,6;CL:0002436,1.45e-10,6;CL:0002427,1.45e-10,6;CL:0002428,1.45e-10,6;CL:0002429,1.45e-10,6;CL:0002433,1.45e-10,6;CL:0002431,1.45e-10,6;CL:0002432,1.45e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.86e-13!128;UBERON:0001555!4.86e-13!128;UBERON:0007026!4.86e-13!128;UBERON:0004119!7.96e-13!130;UBERON:0000925!7.96e-13!130;UBERON:0006595!7.96e-13!130;UBERON:0004921!1.52e-12!126;UBERON:0004185!1.52e-12!126;UBERON:0005409!6.95e-12!59;UBERON:0004177!3.03e-09!29;UBERON:0002193!5.71e-09!48;UBERON:0002390!5.83e-08!45;UBERON:0003061!5.83e-08!45;UBERON:0003408!1.66e-07!24;UBERON:0000160!2.09e-07!43;UBERON:0002370!3.18e-07!23;UBERON:0000974!3.18e-07!23;UBERON:0004807!3.18e-07!23;UBERON:0005058!3.18e-07!23;UBERON:0003351!3.18e-07!23;UBERON:0009113!3.18e-07!23;UBERON:0003295!3.18e-07!23;UBERON:0009722!3.18e-07!23;UBERON:0005562!3.18e-07!23;UBERON:0007690!3.18e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.61e-14,29;UBERON:0005057,2.61e-14,29;UBERON:0004921,5.38e-13,114;UBERON:0005409,1.05e-12,47;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0000160,2.56e-12,31;UBERON:0002193,2.95e-12,48;UBERON:0002405,2.95e-12,48;UBERON:0004119,3.59e-12,118;UBERON:0000925,3.59e-12,118;UBERON:0006595,3.59e-12,118;UBERON:0002390,5.35e-12,45;UBERON:0003061,5.35e-12,45;UBERON:0002370,8.61e-12,23;UBERON:0000974,8.61e-12,23;UBERON:0004807,8.61e-12,23;UBERON:0005058,8.61e-12,23;UBERON:0003351,8.61e-12,23;UBERON:0009113,8.61e-12,23;UBERON:0003295,8.61e-12,23;UBERON:0009722,8.61e-12,23;UBERON:0005562,8.61e-12,23;UBERON:0007690,8.61e-12,23;UBERON:0006562,3.98e-11,24;UBERON:0003408,3.98e-11,24;UBERON:0001557,3.98e-11,24;UBERON:0001042,3.98e-11,24;UBERON:0008814,3.98e-11,24;UBERON:0009145,3.98e-11,24;UBERON:0000077,6.15e-11,35;UBERON:0000072,1.95e-09,27|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,1.00727563147134,1.63528848416868,8.52213934714403,5.77233760821834,11.2350972634557,4.79410311031414,7.49858294556162,18.318478102639,16.7847172644475,0.666219523631325,0.809901069559304,0,5.0473946457318,6.30726394586398,4.2438965179803,0.0850432901510698,4.26951090163807,4.4403964153619,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,1.44425809875637,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,8.70434570413613,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,19.9382170408322,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0.578397427679647,0.884610551949874,0,0.662524555381181,0.484875253135222,0,0,0,3.0654846625031,1.1981512450592,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0.173824320192276,0,0,0,0,0.746441823660558,0,0,0.260240885925407,0.229902104433473,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,1.40442637462647,0.257347907114715,0.568326998791185,0.621377317606506,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0.660837565967596,6.34681359992506,0,0.464473343720877,4.12375876230699,9.07575860805041,4.66993892074228,7.79925067061493,1.42358718463353,4.11747386810027,4.27269854960458,4.17808591286417,5.8489226135736,1.79763881730844,3.24207074812041,1.59313018603494,0,0,0,0,0,0.140271639780637,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.83422552858047,0.196558995113203,0,0.202860121388503,1.20588579876208,0,0,0.162135226775035,0,1.43768206527355,0.74428189533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| ||
|EntrezGene=108655 | |||
|HGNC= | |||
|UniProt=P58462 | |||
|association_with_transcript=99bp_to_ENSMUST00000113322,ENSMUST00000113326_5end | |||
|description=CAGE_peak_5_at_Foxp1_5end | |||
|id=chr6:99216375..99216395,- | |||
|ontology_enrichment_celltype=CL:0000838!2.68e-10!12;CL:0000084!1.09e-09!11;CL:0000827!1.09e-09!11;CL:0000542!5.23e-09!13;CL:0000051!5.23e-09!13;CL:0000791!2.27e-08!9;CL:0000789!2.27e-08!9;CL:0002420!2.27e-08!9;CL:0002419!2.27e-08!9;CL:0000790!2.27e-08!9;CL:0000624!1.38e-07!8;CL:0000988!2.88e-07!32;CL:0002032!2.88e-07!32;CL:0000037!2.88e-07!32;CL:0000566!2.88e-07!32;CL:0000837!2.88e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.32e-19,12;CL:0000084,8.75e-18,11;CL:0000827,8.75e-18,11;CL:0000542,2.94e-17,13;CL:0000051,2.94e-17,13;CL:0000791,3.74e-15,9;CL:0000789,3.74e-15,9;CL:0002420,3.74e-15,9;CL:0002419,3.74e-15,9;CL:0000790,3.74e-15,9;CL:0000624,1.36e-13,8;CL:0000738,2.34e-12,17;CL:0002087,2.34e-12,17;CL:0002031,4.68e-12,25;CL:0000988,9.30e-11,32;CL:0002032,9.30e-11,32;CL:0000037,9.30e-11,32;CL:0000837,9.30e-11,32;CL:0000893,1.45e-10,6;CL:0002489,1.45e-10,6;CL:0000898,1.45e-10,6;CL:0000809,1.45e-10,6;CL:0000810,1.45e-10,6;CL:0000895,1.45e-10,6;CL:0000808,1.45e-10,6;CL:0000894,1.45e-10,6;CL:0000806,1.45e-10,6;CL:0000807,1.45e-10,6;CL:0000805,1.45e-10,6;CL:0002425,1.45e-10,6;CL:0002436,1.45e-10,6;CL:0002427,1.45e-10,6;CL:0002428,1.45e-10,6;CL:0002429,1.45e-10,6;CL:0002433,1.45e-10,6;CL:0002431,1.45e-10,6;CL:0002432,1.45e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.86e-13!128;UBERON:0001555!4.86e-13!128;UBERON:0007026!4.86e-13!128;UBERON:0004119!7.96e-13!130;UBERON:0000925!7.96e-13!130;UBERON:0006595!7.96e-13!130;UBERON:0004921!1.52e-12!126;UBERON:0004185!1.52e-12!126;UBERON:0005409!6.95e-12!59;UBERON:0004177!3.03e-09!29;UBERON:0002193!5.71e-09!48;UBERON:0002390!5.83e-08!45;UBERON:0003061!5.83e-08!45;UBERON:0003408!1.66e-07!24;UBERON:0000160!2.09e-07!43;UBERON:0002370!3.18e-07!23;UBERON:0000974!3.18e-07!23;UBERON:0004807!3.18e-07!23;UBERON:0005058!3.18e-07!23;UBERON:0003351!3.18e-07!23;UBERON:0009113!3.18e-07!23;UBERON:0003295!3.18e-07!23;UBERON:0009722!3.18e-07!23;UBERON:0005562!3.18e-07!23;UBERON:0007690!3.18e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.61e-14,29;UBERON:0005057,2.61e-14,29;UBERON:0004921,5.38e-13,114;UBERON:0005409,1.05e-12,47;UBERON:0001007,1.41e-12,116;UBERON:0001555,1.41e-12,116;UBERON:0007026,1.41e-12,116;UBERON:0000160,2.56e-12,31;UBERON:0002193,2.95e-12,48;UBERON:0002405,2.95e-12,48;UBERON:0004119,3.59e-12,118;UBERON:0000925,3.59e-12,118;UBERON:0006595,3.59e-12,118;UBERON:0002390,5.35e-12,45;UBERON:0003061,5.35e-12,45;UBERON:0002370,8.61e-12,23;UBERON:0000974,8.61e-12,23;UBERON:0004807,8.61e-12,23;UBERON:0005058,8.61e-12,23;UBERON:0003351,8.61e-12,23;UBERON:0009113,8.61e-12,23;UBERON:0003295,8.61e-12,23;UBERON:0009722,8.61e-12,23;UBERON:0005562,8.61e-12,23;UBERON:0007690,8.61e-12,23;UBERON:0006562,3.98e-11,24;UBERON:0003408,3.98e-11,24;UBERON:0001557,3.98e-11,24;UBERON:0001042,3.98e-11,24;UBERON:0008814,3.98e-11,24;UBERON:0009145,3.98e-11,24;UBERON:0000077,6.15e-11,35;UBERON:0000072,1.95e-09,27 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,1.00727563147134,1.63528848416868,8.52213934714403,5.77233760821834,11.2350972634557,4.79410311031414,7.49858294556162,18.318478102639,16.7847172644475,0.666219523631325,0.809901069559304,0,5.0473946457318,6.30726394586398,4.2438965179803,0.0850432901510698,4.26951090163807,4.4403964153619,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,1.44425809875637,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,8.70434570413613,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,19.9382170408322,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0.578397427679647,0.884610551949874,0,0.662524555381181,0.484875253135222,0,0,0,3.0654846625031,1.1981512450592,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0.173824320192276,0,0,0,0,0.746441823660558,0,0,0.260240885925407,0.229902104433473,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,1.40442637462647,0.257347907114715,0.568326998791185,0.621377317606506,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0.660837565967596,6.34681359992506,0,0.464473343720877,4.12375876230699,9.07575860805041,4.66993892074228,7.79925067061493,1.42358718463353,4.11747386810027,4.27269854960458,4.17808591286417,5.8489226135736,1.79763881730844,3.24207074812041,1.59313018603494,0,0,0,0,0,0.140271639780637,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.83422552858047,0.196558995113203,0,0.202860121388503,1.20588579876208,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0.590603785761546,0,1.29214146584111,0,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,2.62332752966866,0,2.05045056957423,0.206386867963223,0.185194527369712,1.69531611304222,3.14396723758358,2.97411625168479,2.37969801991397,2.23922323717853,2.21119958087078,2.86401185404534,0.158167996790568,0.609958401380546,1.51207477150522,0.627264888043406,0.87345025498471,0.269728692769641,0.247960367176008,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0,0,0,5.05617793005085,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,3.4856680360791,1.03382669022204,1.71642964911851,1.447929326445,1.51239277705261,3.70339946811059,3.17499077413087,4.55819918508119,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0,0.252697211763798,0,0,0.749132059759059,0.192075457214608,0.459483751644906,2.38146845641537,0.231768651889711,0,1.64834360321323,1.03039244094078,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.0846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p5@Foxp1 | |||
}} |
Revision as of 11:06, 14 September 2013
Short description: | p5@Foxp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Foxp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENSMUST00000113322, ENSMUST00000113326_5end |
EntrezGene: | Foxp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.61e-14 | 29 |
immune organ | 2.61e-14 | 29 |
subdivision of digestive tract | 5.38e-13 | 114 |
gastrointestinal system | 1.05e-12 | 47 |
digestive system | 1.41e-12 | 116 |
digestive tract | 1.41e-12 | 116 |
primitive gut | 1.41e-12 | 116 |
intestine | 2.56e-12 | 31 |
hemolymphoid system | 2.95e-12 | 48 |
immune system | 2.95e-12 | 48 |
endoderm-derived structure | 3.59e-12 | 118 |
endoderm | 3.59e-12 | 118 |
presumptive endoderm | 3.59e-12 | 118 |
hematopoietic system | 5.35e-12 | 45 |
blood island | 5.35e-12 | 45 |
thymus | 8.61e-12 | 23 |
neck | 8.61e-12 | 23 |
respiratory system epithelium | 8.61e-12 | 23 |
hemolymphoid system gland | 8.61e-12 | 23 |
pharyngeal epithelium | 8.61e-12 | 23 |
thymic region | 8.61e-12 | 23 |
pharyngeal gland | 8.61e-12 | 23 |
entire pharyngeal arch endoderm | 8.61e-12 | 23 |
thymus primordium | 8.61e-12 | 23 |
early pharyngeal endoderm | 8.61e-12 | 23 |
pharynx | 3.98e-11 | 24 |
gland of gut | 3.98e-11 | 24 |
upper respiratory tract | 3.98e-11 | 24 |
chordate pharynx | 3.98e-11 | 24 |
pharyngeal arch system | 3.98e-11 | 24 |
pharyngeal region of foregut | 3.98e-11 | 24 |
mixed endoderm/mesoderm-derived structure | 6.15e-11 | 35 |
segment of respiratory tract | 1.95e-09 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.