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MCL coexpression mm9:40: Difference between revisions

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{{MCL_coexpression_mm9
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|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0.626143513037918,0.231455218399161,0.286963248752788,0.0686377264886741,0.0642873521037868,0.865366190814499,0.801585111686543,0,0,0,0.168259719722084,0.149632666139897,0.153628809860867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501892311714437,0.566879268794264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181236227563129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0179842321938387,0,0,0,0,0,0,0,0,0,0,0.0461300215296274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0685090053637401,0,0,0,0.055643654597214,0.0894734883806707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119259559192106,0,0,0,0,0.0175744277404551,0.0935585710841254,0.0598244186619439,0.0798802230592418,0.0894177291216067,0.0797788474440915,0.111388092060353,0.110130099743907,0.130536619167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=CL:0000791!1.00e-29!9;CL:0000789!1.00e-29!9;CL:0002420!1.00e-29!9;CL:0002419!1.00e-29!9;CL:0000790!1.00e-29!9;CL:0000624!1.92e-26!8;CL:0000084!4.85e-24!11;CL:0000827!4.85e-24!11;CL:0000838!6.59e-22!12;CL:0000542!4.22e-20!13;CL:0000051!4.22e-20!13;CL:0000893!6.48e-20!6;CL:0002489!6.48e-20!6;CL:0000898!6.48e-20!6;CL:0000809!6.48e-20!6;CL:0000810!6.48e-20!6;CL:0000895!6.48e-20!6;CL:0000808!6.48e-20!6;CL:0000894!6.48e-20!6;CL:0000806!6.48e-20!6;CL:0000807!6.48e-20!6;CL:0000805!6.48e-20!6;CL:0002425!6.48e-20!6;CL:0002436!6.48e-20!6;CL:0002427!6.48e-20!6;CL:0002428!6.48e-20!6;CL:0002429!6.48e-20!6;CL:0002433!6.48e-20!6;CL:0002431!6.48e-20!6;CL:0002432!6.48e-20!6;CL:0002031!1.65e-17!25;CL:0002242!4.89e-16!16;CL:0000738!5.32e-15!17;CL:0002087!5.32e-15!17;CL:0000988!3.76e-13!32;CL:0002032!3.76e-13!32;CL:0000037!3.76e-13!32;CL:0000566!3.76e-13!32;CL:0000837!3.76e-13!32;CL:0002320!2.01e-08!46;CL:0000134!2.01e-08!46;CL:0000219!7.89e-07!54
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0004177!3.92e-36!29;UBERON:0005057!3.92e-36!29;UBERON:0002370!8.23e-33!23;UBERON:0000974!8.23e-33!23;UBERON:0004807!8.23e-33!23;UBERON:0005058!8.23e-33!23;UBERON:0003351!8.23e-33!23;UBERON:0009113!8.23e-33!23;UBERON:0003295!8.23e-33!23;UBERON:0009722!8.23e-33!23;UBERON:0005562!8.23e-33!23;UBERON:0007690!8.23e-33!23;UBERON:0002193!1.88e-31!48;UBERON:0002405!1.88e-31!48;UBERON:0006562!2.61e-31!24;UBERON:0003408!2.61e-31!24;UBERON:0001557!2.61e-31!24;UBERON:0001042!2.61e-31!24;UBERON:0008814!2.61e-31!24;UBERON:0009145!2.61e-31!24;UBERON:0002390!1.38e-30!45;UBERON:0003061!1.38e-30!45;UBERON:0000077!2.69e-29!35;UBERON:0000072!1.79e-27!27;UBERON:0000065!1.16e-21!41;UBERON:0001004!4.63e-21!42;UBERON:0000063!1.87e-20!35;UBERON:0007811!8.52e-20!36;UBERON:0000153!4.80e-16!43;UBERON:0003081!9.35e-14!87;UBERON:0001041!2.05e-13!80;UBERON:0003929!7.76e-12!55;UBERON:0005911!2.12e-11!69;UBERON:0002368!1.40e-10!60;UBERON:0002530!1.61e-09!65;UBERON:0000490!2.51e-09!66;UBERON:0000064!4.86e-09!99;UBERON:0000926!8.94e-09!120;UBERON:0004120!8.94e-09!120;UBERON:0006603!8.94e-09!120;UBERON:0002384!2.01e-08!46;UBERON:0000949!2.78e-08!72;UBERON:0004921!3.58e-08!114;UBERON:0001007!5.84e-08!116;UBERON:0001555!5.84e-08!116;UBERON:0007026!5.84e-08!116;UBERON:0004119!9.37e-08!118;UBERON:0000925!9.37e-08!118;UBERON:0006595!9.37e-08!118
|tfbs_overrepresentation_for_novel_motifs=0.0352931,2.37563e-05,0.0270766,0.0925414,2.62314,0.387757,0.0144081,0.413236,0.242407,0.000185038,0.18815,0.763907,0.0119694,0.0606967,1.76433,0,0.00997315,1.41012,0.00191913,0.206033,3.20611,0.00225871,0.0597539,1.3926,0.00374366,0.399431,0.437338,0.506676,0.0284571,0.00701678,0.0958123,0.163169,0.42129,0.0895347,0.00194659,0.00129708,4.96409e-05,0.142821,0.289718,0.381877,0.647895,0.00808911,0.00771846,1.33836,0.000104414,0.0100841,0.384475,0.297237,2.49497,0.0459652,0.0448416,0.830617,0.155465,0.0633599,0.717942,0.0106394,0.451711,0.0162186,0.00459072,0.105466,0.515687,0.00242132,0.241416,0.0750526,0.0491206,0.00361631,0.603578,0.363188,0.22186,0.0578146,0.0375355,1.45145,0.000108057,0.577678,5.48057e-06,0.00261245,0.0712843,0.102178,0.0251457,1.63114,3.24813,0.0695998,0.885418,0.678321,0.0346051,2.41082e-16,10.0868,0.0534424,0.402211,0.572544,1.57755,0.306344,1.10895,3.22051,9.04218e-09,2.04194,0.132944,0.647009,0.674129,0.0372988,2.63683,0.270395,0.399178,0.833173,0.0020947,0.00798996,0.0013018,1.78512,0.00352927,0.00261172,0.0677996,0.403411,0.660515,0.0982132,0.113978,0.933971,1.61375e-07,0.00826208,0.277536,1.24963,0.376716,0.102457,1.4155,0.609066,0.151678,0.0612891,0.200708,0.429887,0.183343,0.523007,0.778601,0.36219,2.37571,0.770068,0.556871,5.85728,1.44947,0.211909,0.0971509,1.15746,0.528495,0.615833,6.32534,0.0966234,0.0791966,0.208775,0.689465,0.42553,2.30213,0.00282587,0.115354,2.89298e-16,0.663781,0.0728792,0.131165,1.29946,0.527011,0.964541,0.721575,0.000169392,0.102774,0.170668,0.12015,0.0166989,0.773413,0.875639,0.0662799,0.486858,2.6519e-15
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;2.67476,MA0006.1;0.00079504,MA0007.1;0.0164903,MA0009.1;0.329822,MA0014.1;4.82164e-17,MA0017.1;0.388407,MA0019.1;2.04179,MA0024.1;0.364197,MA0025.1;0.149784,MA0027.1;0.896442,MA0028.1;6.96124e-05,MA0029.1;0.626184,MA0030.1;1.10515,MA0031.1;1.68461,MA0038.1;0.29705,MA0040.1;0.125418,MA0041.1;0.310694,MA0042.1;0.107231,MA0043.1;0.396805,MA0046.1;0.152722,MA0048.1;0.00047414,MA0050.1;2.12667,MA0051.1;0.87923,MA0052.1;0.134443,MA0055.1;0.000225717,MA0056.1;0,MA0057.1;0.00695659,MA0058.1;1.23214,MA0059.1;0.271098,MA0060.1;7.49193e-07,MA0061.1;0.034292,MA0063.1;0,MA0066.1;0.905954,MA0067.1;0.0269683,MA0068.1;0.251359,MA0069.1;1.97862,MA0070.1;0.735527,MA0071.1;0.0580524,MA0072.1;0.208042,MA0073.1;0.0532613,MA0074.1;0.652998,MA0076.1;0.018612,MA0077.1;0.0155032,MA0078.1;0.756196,MA0081.1;1.25872,MA0083.1;0.595854,MA0084.1;0.428463,MA0087.1;0.300311,MA0088.1;0.000542044,MA0089.1;0,MA0090.1;0.0958043,MA0091.1;0.0338054,MA0092.1;0.389483,MA0093.1;2.88271,MA0095.1;0,MA0098.1;0,MA0100.1;0.0186333,MA0101.1;0.0538665,MA0103.1;0.323496,MA0105.1;4.09891e-06,MA0106.1;0.18417,MA0107.1;0.229705,MA0108.2;0.126466,MA0109.1;0,MA0111.1;1.65486,MA0113.1;0.794231,MA0114.1;0.245938,MA0115.1;0.0552722,MA0116.1;0.00149446,MA0117.1;0.0408468,MA0119.1;0.397711,MA0122.1;0.374436,MA0124.1;0.662469,MA0125.1;0.13519,MA0130.1;0,MA0131.1;0.0101401,MA0132.1;0,MA0133.1;0,MA0135.1;0.0735951,MA0136.1;3.49815,MA0139.1;0.000600077,MA0140.1;0.194722,MA0141.1;0.00625179,MA0142.1;1.86157,MA0143.1;1.31349,MA0144.1;1.49984,MA0145.1;5.91605e-05,MA0146.1;4.62877e-14,MA0147.1;0.0203316,MA0148.1;2.00277,MA0149.1;9.86249e-06,MA0062.2;0.0350817,MA0035.2;1.92474,MA0039.2;3.40503e-10,MA0138.2;0.0446286,MA0002.2;7.52869,MA0137.2;1.91645,MA0104.2;0.0053679,MA0047.2;1.61649,MA0112.2;3.58909e-05,MA0065.2;0.000251376,MA0150.1;0.190841,MA0151.1;0,MA0152.1;0.396319,MA0153.1;0.0278376,MA0154.1;0.00022701,MA0155.1;0.00326076,MA0156.1;6.52596,MA0157.1;2.17431,MA0158.1;0,MA0159.1;0.00349716,MA0160.1;0.0616307,MA0161.1;0,MA0162.1;3.49087e-14,MA0163.1;2.69211e-10,MA0164.1;0.214393,MA0080.2;8.28252,MA0018.2;0.0114703,MA0099.2;0.0756416,MA0079.2;0,MA0102.2;0.165454,MA0258.1;0.105338,MA0259.1;0.149282,MA0442.1;0
}}

Latest revision as of 14:34, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:116351057..116351076,+p@chr10:116351057..116351076
+
Mm9::chr10:116351158..116351171,+p@chr10:116351158..116351171
+
Mm9::chr10:116351174..116351184,+p@chr10:116351174..116351184
+
Mm9::chr10:116351204..116351237,+p@chr10:116351204..116351237
+
Mm9::chr10:116351243..116351254,+p@chr10:116351243..116351254
+
Mm9::chr10:118070804..118070831,+p@chr10:118070804..118070831
+
Mm9::chr10:126573701..126573710,-p@chr10:126573701..126573710
-
Mm9::chr10:126599978..126600004,-p@chr10:126599978..126600004
-
Mm9::chr10:126600445..126600473,+p@chr10:126600445..126600473
+
Mm9::chr10:126600594..126600604,+p@chr10:126600594..126600604
+
Mm9::chr10:126602735..126602748,-p@chr10:126602735..126602748
-
Mm9::chr10:126759338..126759353,+p@chr10:126759338..126759353
+
Mm9::chr10:128158275..128158279,-p@chr10:128158275..128158279
-
Mm9::chr10:128181902..128181943,-p@chr10:128181902..128181943
-
Mm9::chr10:128182102..128182114,-p@chr10:128182102..128182114
-
Mm9::chr10:128182125..128182137,-p@chr10:128182125..128182137
-
Mm9::chr10:128182138..128182141,-p@chr10:128182138..128182141
-
Mm9::chr10:3366032..3366041,+p4@Ipcef1
Mm9::chr10:3366050..3366095,+p1@Ipcef1
Mm9::chr10:42580430..42580433,+p10@Scml4
Mm9::chr10:42580454..42580482,+p1@Scml4
Mm9::chr10:42580488..42580498,+p7@Scml4
Mm9::chr10:42580547..42580552,+p11@Scml4
Mm9::chr10:42580554..42580565,+p5@Scml4
Mm9::chr10:42580582..42580616,+p2@Scml4
Mm9::chr10:42581384..42581394,+p@chr10:42581384..42581394
+
Mm9::chr10:42617673..42617694,+p@chr10:42617673..42617694
+
Mm9::chr10:60760476..60760487,+p4@Prf1
Mm9::chr10:60760497..60760536,+p2@Prf1
Mm9::chr10:74994753..74994771,+p@chr10:74994753..74994771
+
Mm9::chr10:87667220..87667236,+p@chr10:87667220..87667236
+
Mm9::chr11:11589766..11589772,-p@chr11:11589766..11589772
-
Mm9::chr11:11589947..11589950,+p18@Ikzf1
Mm9::chr11:11590411..11590424,+p@chr11:11590411..11590424
+
Mm9::chr11:11590452..11590471,+p@chr11:11590452..11590471
+
Mm9::chr11:11590836..11590851,+p@chr11:11590836..11590851
+
Mm9::chr11:11641846..11641861,+p@chr11:11641846..11641861
+
Mm9::chr11:3046354..3046395,-p3@Sfi1
Mm9::chr11:46185905..46185945,-p@chr11:46185905..46185945
-
Mm9::chr11:46202051..46202090,-p@chr11:46202051..46202090
-
Mm9::chr11:48894986..48894987,-p@chr11:48894986..48894987
-
Mm9::chr11:52079248..52079254,+p@chr11:52079248..52079254
+
Mm9::chr11:53896501..53896513,+p@chr11:53896501..53896513
+
Mm9::chr11:54381700..54381715,+p@chr11:54381700..54381715
+
Mm9::chr11:63893049..63893076,+p1@ENSMUST00000146333
Mm9::chr11:63893115..63893126,+p2@ENSMUST00000146333
Mm9::chr11:6460229..6460243,+p6@Ccm2
Mm9::chr11:68249485..68249490,+p@chr11:68249485..68249490
+
Mm9::chr11:68264865..68264871,-p@chr11:68264865..68264871
-
Mm9::chr11:68265138..68265156,+p@chr11:68265138..68265156
+
Mm9::chr11:68265175..68265188,+p@chr11:68265175..68265188
+
Mm9::chr11:75828930..75828947,-p@chr11:75828930..75828947
-
Mm9::chr11:75828956..75828969,-p@chr11:75828956..75828969
-
Mm9::chr11:77162770..77162781,+p@chr11:77162770..77162781
+
Mm9::chr11:82893368..82893373,-p@chr11:82893368..82893373
-
Mm9::chr11:82893386..82893399,-p@chr11:82893386..82893399
-
Mm9::chr11:82930092..82930094,-p@chr11:82930092..82930094
-
Mm9::chr11:86641962..86641973,-p@chr11:86641962..86641973
-
Mm9::chr11:87862569..87862582,-p@chr11:87862569..87862582
-
Mm9::chr11:98970877..98970916,+p@chr11:98970877..98970916
+
Mm9::chr11:99013570..99013576,-p@chr11:99013570..99013576
-
Mm9::chr12:103850888..103850898,+p@chr12:103850888..103850898
+
Mm9::chr12:109234664..109234670,+p@chr12:109234664..109234670
+
Mm9::chr12:109874056..109874068,+p7@Evl
Mm9::chr12:29493556..29493577,-p@chr12:29493556..29493577
-
Mm9::chr12:29519566..29519579,+p@chr12:29519566..29519579
+
Mm9::chr12:70359158..70359169,+p@chr12:70359158..70359169
+
Mm9::chr12:71237248..71237263,-p@chr12:71237248..71237263
-
Mm9::chr13:102471830..102471890,-p@chr13:102471830..102471890
-
Mm9::chr13:102472075..102472082,-p@chr13:102472075..102472082
-
Mm9::chr13:110627985..110627994,+p@chr13:110627985..110627994
+
Mm9::chr13:110628000..110628014,+p@chr13:110628000..110628014
+
Mm9::chr13:110628022..110628031,+p@chr13:110628022..110628031
+
Mm9::chr13:113228247..113228270,-p@chr13:113228247..113228270
-
Mm9::chr13:118007195..118007202,+p@chr13:118007195..118007202
+
Mm9::chr13:24695663..24695674,-p1@Gm11346
Mm9::chr13:24695737..24695755,-p2@Gm11346
Mm9::chr13:24695761..24695773,-p4@Gm11346
Mm9::chr13:24696947..24696950,+p@chr13:24696947..24696950
+
Mm9::chr13:24706087..24706113,+p6@Fam65b
Mm9::chr13:30258226..30258240,+p@chr13:30258226..30258240
+
Mm9::chr13:30258830..30258841,+p@chr13:30258830..30258841
+
Mm9::chr13:30258855..30258872,+p@chr13:30258855..30258872
+
Mm9::chr13:80346914..80346917,+p@chr13:80346914..80346917
+
Mm9::chr14:101516375..101516377,+p@chr14:101516375..101516377
+
Mm9::chr14:122279135..122279153,+p@chr14:122279135..122279153
+
Mm9::chr14:122328597..122328610,-p@chr14:122328597..122328610
-
Mm9::chr14:122328900..122328906,+p@chr14:122328900..122328906
+
Mm9::chr14:122330138..122330149,+p@chr14:122330138..122330149
+
Mm9::chr14:122350765..122350775,+p@chr14:122350765..122350775
+
Mm9::chr14:122353970..122353993,-p@chr14:122353970..122353993
-
Mm9::chr14:122362638..122362647,-p@chr14:122362638..122362647
-
Mm9::chr14:122363047..122363055,+p@chr14:122363047..122363055
+
Mm9::chr14:122411229..122411240,+p@chr14:122411229..122411240
+
Mm9::chr14:48015456..48015463,-p@chr14:48015456..48015463
-
Mm9::chr14:54841912..54841931,+p@chr14:54841912..54841931
+
Mm9::chr14:54852925..54852936,-p@chr14:54852925..54852936
-
Mm9::chr15:100550586..100550604,-p@chr15:100550586..100550604
-
Mm9::chr15:100550611..100550625,-p@chr15:100550611..100550625
-
Mm9::chr15:100550626..100550637,-p@chr15:100550626..100550637
-
Mm9::chr15:100580325..100580338,+p@chr15:100580325..100580338
+
Mm9::chr15:102046213..102046217,-p@chr15:102046213..102046217
-
Mm9::chr15:102062351..102062372,-p2@Itgb7
Mm9::chr15:36275928..36275936,-p@chr15:36275928..36275936
-
Mm9::chr15:5058424..5058433,-p5@Card6
Mm9::chr15:59961552..59961558,-p@chr15:59961552..59961558
-
Mm9::chr15:59973273..59973286,-p@chr15:59973273..59973286
-
Mm9::chr15:59981261..59981282,-p@chr15:59981261..59981282
-
Mm9::chr15:59996110..59996113,-p@chr15:59996110..59996113
-
Mm9::chr15:80407047..80407054,-p@chr15:80407047..80407054
-
Mm9::chr15:9457798..9457807,-p@chr15:9457798..9457807
-
Mm9::chr15:9457833..9457843,-p@chr15:9457833..9457843
-
Mm9::chr15:9459452..9459463,-p6@Il7r
Mm9::chr15:9459493..9459527,-p4@Il7r
Mm9::chr15:9459568..9459601,-p1@Il7r
Mm9::chr15:9459605..9459620,-p2@Il7r
Mm9::chr15:9459623..9459636,-p3@Il7r
Mm9::chr15:97203801..97203815,+p@chr15:97203801..97203815
+
Mm9::chr15:97203819..97203833,+p@chr15:97203819..97203833
+
Mm9::chr15:97203840..97203853,+p@chr15:97203840..97203853
+
Mm9::chr15:97204367..97204379,+p@chr15:97204367..97204379
+
Mm9::chr15:97204410..97204419,+p@chr15:97204410..97204419
+
Mm9::chr15:97204443..97204467,+p@chr15:97204443..97204467
+
Mm9::chr15:97204477..97204490,+p@chr15:97204477..97204490
+
Mm9::chr15:97204630..97204637,+p@chr15:97204630..97204637
+
Mm9::chr15:97215881..97215885,+p@chr15:97215881..97215885
+
Mm9::chr15:97254987..97255003,+p@chr15:97254987..97255003
+
Mm9::chr15:97255030..97255037,+p@chr15:97255030..97255037
+
Mm9::chr15:99106711..99106721,+p@chr15:99106711..99106721
+
Mm9::chr15:99288548..99288559,-p5@Nckap5l
Mm9::chr15:99288573..99288587,-p6@Nckap5l
Mm9::chr16:23171087..23171101,-p@chr16:23171087..23171101
-
Mm9::chr16:23175250..23175266,+p2@uc007ytl.1
Mm9::chr16:23179210..23179215,+p1@ENSMUST00000091363
p1@ENSMUST00000119199
Mm9::chr16:23181667..23181677,-p@chr16:23181667..23181677
-
Mm9::chr16:23226841..23226853,-p@chr16:23226841..23226853
-
Mm9::chr16:23375130..23375136,-p@chr16:23375130..23375136
-
Mm9::chr16:35770316..35770341,-p@chr16:35770316..35770341
-
Mm9::chr16:4212812..4212819,+p@chr16:4212812..4212819
+
Mm9::chr16:44965362..44965370,+p7@Cd200r3
Mm9::chr16:45224932..45224944,-p@chr16:45224932..45224944
-
Mm9::chr16:49854650..49854657,+p@chr16:49854650..49854657
+
Mm9::chr16:52147504..52147515,-p@chr16:52147504..52147515
-
Mm9::chr16:55895437..55895451,-p3@Fam55c
Mm9::chr16:64770951..64770962,-p3@4930453N24Rik
Mm9::chr16:91548074..91548085,+p@chr16:91548074..91548085
+
Mm9::chr17:32540429..32540440,-p3@Rasal3
Mm9::chr17:32540471..32540480,-p2@Rasal3
Mm9::chr17:34068304..34068318,+p10@Rgl2
Mm9::chr17:35517201..35517222,-p1@ENSMUST00000113886
p1@uc012arf.1
Mm9::chr17:51953230..51953241,-p@chr17:51953230..51953241
-
Mm9::chr17:51953554..51953561,-p@chr17:51953554..51953561
-
Mm9::chr17:80878730..80878774,+p@chr17:80878730..80878774
+
Mm9::chr17:84403687..84403699,-p@chr17:84403687..84403699
-
Mm9::chr17:84713002..84713009,-p@chr17:84713002..84713009
-
Mm9::chr17:84713016..84713036,-p@chr17:84713016..84713036
-
Mm9::chr17:84713183..84713186,+p@chr17:84713183..84713186
+
Mm9::chr18:56615278..56615283,-p@chr18:56615278..56615283
-
Mm9::chr18:56628649..56628661,-p@chr18:56628649..56628661
-
Mm9::chr18:56630549..56630577,-p@chr18:56630549..56630577
-
Mm9::chr18:56630616..56630620,+p@chr18:56630616..56630620
+
Mm9::chr18:56630694..56630699,+p@chr18:56630694..56630699
+
Mm9::chr18:56630703..56630719,+p@chr18:56630703..56630719
+
Mm9::chr18:56630737..56630748,+p@chr18:56630737..56630748
+
Mm9::chr18:56630755..56630766,+p@chr18:56630755..56630766
+
Mm9::chr18:80794291..80794299,-p@chr18:80794291..80794299
-
Mm9::chr18:80904001..80904008,+p@chr18:80904001..80904008
+
Mm9::chr18:89366583..89366590,+p12@Cd226
Mm9::chr19:10858013..10858023,+p@chr19:10858013..10858023
+
Mm9::chr19:11518067..11518083,+p1@Ms4a4b
Mm9::chr19:11518086..11518099,+p2@Ms4a4b
Mm9::chr19:11539927..11539932,+p@chr19:11539927..11539932
+
Mm9::chr19:11590963..11590987,+p3@Ms4a6b
Mm9::chr19:4066410..4066425,+p@chr19:4066410..4066425
+
Mm9::chr19:45649630..45649652,+p@chr19:45649630..45649652
+
Mm9::chr19:53262854..53262865,-p@chr19:53262854..53262865
-
Mm9::chr19:53268825..53268836,+p@chr19:53268825..53268836
+
Mm9::chr19:53268848..53268905,+p@chr19:53268848..53268905
+
Mm9::chr1:135957388..135957392,-p@chr1:135957388..135957392
-
Mm9::chr1:138477106..138477124,-p@chr1:138477106..138477124
-
Mm9::chr1:138477158..138477166,-p@chr1:138477158..138477166
-
Mm9::chr1:154135126..154135143,-p@chr1:154135126..154135143
-
Mm9::chr1:167166625..167166638,+p@chr1:167166625..167166638
+
Mm9::chr1:180266340..180266345,+p@chr1:180266340..180266345
+
Mm9::chr1:54982999..54983035,+p@chr1:54982999..54983035
+
Mm9::chr1:60808560..60808563,+p@chr1:60808560..60808563
+
Mm9::chr1:60812319..60812323,+p@chr1:60812319..60812323
+
Mm9::chr1:90598850..90598871,+p@chr1:90598850..90598871
+
Mm9::chr2:11081400..11081406,-p@chr2:11081400..11081406
-
Mm9::chr2:11093508..11093542,+p13@Prkcq
Mm9::chr2:11093843..11093864,+p3@Prkcq
Mm9::chr2:11093915..11093929,+p7@Prkcq
Mm9::chr2:11093936..11093954,+p4@Prkcq
Mm9::chr2:11093983..11093994,+p9@Prkcq
Mm9::chr2:11094015..11094046,+p2@Prkcq
Mm9::chr2:11097490..11097500,+p@chr2:11097490..11097500
+
Mm9::chr2:11127736..11127739,+p@chr2:11127736..11127739
+
Mm9::chr2:113972778..113972790,-p@chr2:113972778..113972790
-
Mm9::chr2:113972802..113972816,-p@chr2:113972802..113972816
-
Mm9::chr2:13146334..13146350,-p@chr2:13146334..13146350
-
Mm9::chr2:163910357..163910377,+p@chr2:163910357..163910377
+
Mm9::chr2:181112261..181112276,+p@chr2:181112261..181112276
+
Mm9::chr2:25917850..25917862,-p15@Nacc2
Mm9::chr2:32348935..32348958,-p@chr2:32348935..32348958
-
Mm9::chr2:58009475..58009500,-p5@Cytip
Mm9::chr2:58016362..58016407,+p1@ENSMUST00000138444
p1@uc008jsn.1
Mm9::chr2:68798396..68798416,+p@chr2:68798396..68798416
+
Mm9::chr2:91023998..91024056,-p4@Madd
Mm9::chr3:106288846..106288878,-p1@2010016I18Rik
Mm9::chr3:115376937..115376950,+p@chr3:115376937..115376950
+
Mm9::chr3:115376987..115376995,+p@chr3:115376987..115376995
+
Mm9::chr3:115415457..115415472,-p@chr3:115415457..115415472
-
Mm9::chr3:115416711..115416724,-p@chr3:115416711..115416724
-
Mm9::chr3:115590955..115590972,-p3@A930005H10Rik
Mm9::chr3:115590973..115591000,-p2@A930005H10Rik
Mm9::chr3:130859204..130859218,+p@chr3:130859204..130859218
+
Mm9::chr3:130859225..130859262,+p@chr3:130859225..130859262
+
Mm9::chr3:130859273..130859284,+p@chr3:130859273..130859284
+
Mm9::chr3:130859367..130859375,+p@chr3:130859367..130859375
+
Mm9::chr3:130859376..130859388,+p@chr3:130859376..130859388
+
Mm9::chr3:130873338..130873354,+p@chr3:130873338..130873354
+
Mm9::chr3:130903024..130903063,+p@chr3:130903024..130903063
+
Mm9::chr3:130926746..130926755,+p@chr3:130926746..130926755
+
Mm9::chr3:142283560..142283591,+p1@Gbp2
Mm9::chr3:20123000..20123044,+p@chr3:20123000..20123044
+
Mm9::chr3:60305650..60305683,-p@chr3:60305650..60305683
-
Mm9::chr3:60305747..60305756,-p@chr3:60305747..60305756
-
Mm9::chr3:60305899..60305922,+p@chr3:60305899..60305922
+
Mm9::chr3:88257310..88257323,-p@chr3:88257310..88257323
-
Mm9::chr3:88257327..88257334,-p@chr3:88257327..88257334
-
Mm9::chr3:88257395..88257401,-p@chr3:88257395..88257401
-
Mm9::chr3:88991741..88991752,+p12@Fam189b
Mm9::chr3:88991792..88991818,+p6@Fam189b
Mm9::chr3:88991843..88991887,+p3@Fam189b
Mm9::chr3:88991896..88991919,+p7@Fam189b
Mm9::chr3:88992270..88992288,+p@chr3:88992270..88992288
+
Mm9::chr3:89191004..89191022,-p4@Zbtb7b
Mm9::chr3:95035398..95035433,+p@chr3:95035398..95035433
+
Mm9::chr4:100858177..100858181,+p@chr4:100858177..100858181
+
Mm9::chr4:102245422..102245443,+p@chr4:102245422..102245443
+
Mm9::chr4:123250060..123250088,-p@chr4:123250060..123250088
-
Mm9::chr4:123250109..123250120,-p@chr4:123250109..123250120
-
Mm9::chr4:123250150..123250181,-p@chr4:123250150..123250181
-
Mm9::chr4:134306163..134306176,-p3@Ldlrap1
Mm9::chr4:134306205..134306213,-p4@Ldlrap1
Mm9::chr4:134471004..134471034,+p@chr4:134471004..134471034
+
Mm9::chr4:135736416..135736429,-p@chr4:135736416..135736429
-
Mm9::chr4:151499232..151499242,+p@chr4:151499232..151499242
+
Mm9::chr4:151500101..151500110,-p@chr4:151500101..151500110
-
Mm9::chr4:151501271..151501274,+p@chr4:151501271..151501274
+
Mm9::chr4:32326967..32326973,-p@chr4:32326967..32326973
-
Mm9::chr4:32335511..32335532,+p@chr4:32335511..32335532
+
Mm9::chr4:32336360..32336395,+p@chr4:32336360..32336395
+
Mm9::chr4:32337549..32337564,+p@chr4:32337549..32337564
+
Mm9::chr4:32339511..32339518,+p@chr4:32339511..32339518
+
Mm9::chr4:32378758..32378774,+p@chr4:32378758..32378774
+
Mm9::chr4:32422614..32422621,-p@chr4:32422614..32422621
-
Mm9::chr4:33164363..33164392,+p@chr4:33164363..33164392
+
Mm9::chr4:98103655..98103662,+p21@Inadl
Mm9::chr5:101345560..101345571,-p@chr5:101345560..101345571
-
Mm9::chr5:111023799..111023834,+p@chr5:111023799..111023834
+
Mm9::chr5:113989067..113989073,+p@chr5:113989067..113989073
+
Mm9::chr5:113989094..113989110,+p@chr5:113989094..113989110
+
Mm9::chr5:122681036..122681049,+p@chr5:122681036..122681049
+
Mm9::chr5:122685409..122685425,+p@chr5:122685409..122685425
+
Mm9::chr5:124484591..124484598,-p@chr5:124484591..124484598
-
Mm9::chr5:124485698..124485723,-p@chr5:124485698..124485723
-
Mm9::chr5:134720044..134720103,-p6@Gtf2i
Mm9::chr5:141072502..141072534,-p@chr5:141072502..141072534
-
Mm9::chr5:141085636..141085645,-p@chr5:141085636..141085645
-
Mm9::chr5:145038087..145038127,+p1@Gm15708
Mm9::chr5:147593504..147593526,+p@chr5:147593504..147593526
+
Mm9::chr5:149678450..149678459,+p@chr5:149678450..149678459
+
Mm9::chr5:149679459..149679493,-p@chr5:149679459..149679493
-
Mm9::chr5:31823082..31823112,-p@chr5:31823082..31823112
-
Mm9::chr5:37436182..37436197,+p@chr5:37436182..37436197
+
Mm9::chr5:72554300..72554315,-p@chr5:72554300..72554315
-
Mm9::chr5:73026243..73026277,+p@chr5:73026243..73026277
+
Mm9::chr6:106744181..106744191,-p@chr6:106744181..106744191
-
Mm9::chr6:126758357..126758369,+p@chr6:126758357..126758369
+
Mm9::chr6:129225479..129225509,+p@chr6:129225479..129225509
+
Mm9::chr6:48634543..48634555,+p3@Gimap4
Mm9::chr6:48634569..48634585,+p1@Gimap4
Mm9::chr6:48634588..48634597,+p2@Gimap4
Mm9::chr6:48640645..48640657,+p@chr6:48640645..48640657
+
Mm9::chr6:48687110..48687122,-p@chr6:48687110..48687122
-
Mm9::chr6:48687899..48687930,-p@chr6:48687899..48687930
-
Mm9::chr6:48720832..48720883,-p1@Gimap3
Mm9::chr6:48720981..48721009,+p@chr6:48720981..48721009
+
Mm9::chr6:99352041..99352044,-p@chr6:99352041..99352044
-
Mm9::chr6:99379009..99379037,-p@chr6:99379009..99379037
-
Mm9::chr7:108734107..108734121,-p@chr7:108734107..108734121
-
Mm9::chr7:118100395..118100406,-p@chr7:118100395..118100406
-
Mm9::chr7:121213686..121213706,-p@chr7:121213686..121213706
-
Mm9::chr7:132630924..132630939,+p@chr7:132630924..132630939
+
Mm9::chr7:132634626..132634644,+p@chr7:132634626..132634644
+
Mm9::chr7:16951800..16951811,-p@chr7:16951800..16951811
-
Mm9::chr7:25192254..25192279,+p@chr7:25192254..25192279
+
Mm9::chr7:28326673..28326723,+p@chr7:28326673..28326723
+
Mm9::chr7:28330324..28330348,+p@chr7:28330324..28330348
+
Mm9::chr7:31940976..31941000,-p@chr7:31940976..31941000
-
Mm9::chr7:52391439..52391451,-p3@Flt3l
Mm9::chr7:52391452..52391470,-p1@Flt3l
Mm9::chr7:52391472..52391492,-p4@Flt3l
Mm9::chr7:6766484..6766486,+p@chr7:6766484..6766486
+
Mm9::chr7:82754545..82754572,+p15@Akap13
Mm9::chr7:85596591..85596593,-p@chr7:85596591..85596593
-
Mm9::chr8:117339483..117339505,+p@chr8:117339483..117339505
+
Mm9::chr8:125564946..125564953,-p@chr8:125564946..125564953
-
Mm9::chr8:15011441..15011457,+p@chr8:15011441..15011457
+
Mm9::chr8:15018465..15018474,+p@chr8:15018465..15018474
+
Mm9::chr8:15027167..15027176,+p@chr8:15027167..15027176
+
Mm9::chr8:26384949..26384955,+p@chr8:26384949..26384955
+
Mm9::chr8:26384973..26384990,+p@chr8:26384973..26384990
+
Mm9::chr8:35208298..35208303,+p@chr8:35208298..35208303
+
Mm9::chr8:35209429..35209438,+p@chr8:35209429..35209438
+
Mm9::chr8:35219634..35219639,-p@chr8:35219634..35219639
-
Mm9::chr8:84291813..84291895,+p@chr8:84291813..84291895
+
Mm9::chr8:86566439..86566498,-p1@Il27ra
Mm9::chr8:90814451..90814474,+p@chr8:90814451..90814474
+
Mm9::chr8:90817662..90817694,+p5@Adcy7
Mm9::chr8:96939357..96939388,+p@chr8:96939357..96939388
+
Mm9::chr9:110782696..110782711,+p4@Als2cl
Mm9::chr9:110782753..110782768,+p5@Als2cl
Mm9::chr9:110782790..110782819,+p1@Als2cl
Mm9::chr9:110782825..110782850,+p3@Als2cl
Mm9::chr9:110782854..110782868,+p8@Als2cl
Mm9::chr9:115380804..115380824,-p@chr9:115380804..115380824
-
Mm9::chr9:116098292..116098303,+p1@uc009ryu.1
Mm9::chr9:121363777..121363796,-p@chr9:121363777..121363796
-
Mm9::chr9:121363857..121363862,-p@chr9:121363857..121363862
-
Mm9::chr9:21936701..21936724,-p8@Acp5
Mm9::chr9:21936727..21936744,-p12@Acp5
Mm9::chr9:21936768..21936778,-p13@Acp5
Mm9::chr9:21940709..21940717,+p@chr9:21940709..21940717
+
Mm9::chr9:32504450..32504461,+p@chr9:32504450..32504461
+
Mm9::chr9:32504571..32504596,+p@chr9:32504571..32504596
+
Mm9::chr9:32506995..32507008,+p@chr9:32506995..32507008
+
Mm9::chr9:32510463..32510479,-p@chr9:32510463..32510479
-
Mm9::chr9:32734096..32734110,+p@chr9:32734096..32734110
+
Mm9::chr9:32734190..32734205,+p@chr9:32734190..32734205
+
Mm9::chr9:32735914..32735939,-p@chr9:32735914..32735939
-
Mm9::chr9:32736299..32736305,+p@chr9:32736299..32736305
+
Mm9::chr9:44809097..44809117,-p@chr9:44809097..44809117
-
Mm9::chr9:61773263..61773268,-p@chr9:61773263..61773268
-
Mm9::chr9:61773281..61773290,-p@chr9:61773281..61773290
-
Mm9::chr9:85604007..85604014,-p@chr9:85604007..85604014
-
Mm9::chr9:85604020..85604046,-p@chr9:85604020..85604046
-
Mm9::chr9:96295361..96295370,-p@chr9:96295361..96295370
-
Mm9::chr9:96295374..96295390,-p@chr9:96295374..96295390
-
Mm9::chr9:96295395..96295414,-p@chr9:96295395..96295414
-
Mm9::chr9:96338580..96338645,-p1@uc012gyp.1
Mm9::chr9:97011721..97011738,+p@chr9:97011721..97011738
+
Mm9::chrX:101866323..101866352,-p3@Zdhhc15
Mm9::chrX:39713868..39713940,+p@chrX:39713868..39713940
+
Mm9::chrX:39727797..39727802,+p@chrX:39727797..39727802
+
Mm9::chrX:95455082..95455112,-p@chrX:95455082..95455112
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
mature alpha-beta T cell1.00e-299
alpha-beta T cell1.00e-299
immature T cell1.00e-299
mature T cell1.00e-299
immature alpha-beta T cell1.00e-299
CD4-positive, alpha-beta T cell1.92e-268
T cell4.85e-2411
pro-T cell4.85e-2411
lymphoid lineage restricted progenitor cell6.59e-2212
lymphocyte4.22e-2013
common lymphoid progenitor4.22e-2013
thymocyte6.48e-206
double negative thymocyte6.48e-206
naive T cell6.48e-206
double-positive, alpha-beta thymocyte6.48e-206
CD4-positive, alpha-beta thymocyte6.48e-206
naive thymus-derived CD4-positive, alpha-beta T cell6.48e-206
DN4 thymocyte6.48e-206
DN1 thymic pro-T cell6.48e-206
DN2 thymocyte6.48e-206
DN3 thymocyte6.48e-206
immature single positive thymocyte6.48e-206
early T lineage precursor6.48e-206
mature CD4 single-positive thymocyte6.48e-206
resting double-positive thymocyte6.48e-206
double-positive blast6.48e-206
CD69-positive double-positive thymocyte6.48e-206
CD69-positive, CD4-positive single-positive thymocyte6.48e-206
CD4-positive, CD8-intermediate double-positive thymocyte6.48e-206
CD24-positive, CD4 single-positive thymocyte6.48e-206
hematopoietic lineage restricted progenitor cell1.65e-1725
nucleate cell4.89e-1616
leukocyte5.32e-1517
nongranular leukocyte5.32e-1517
hematopoietic cell3.76e-1332
hematopoietic oligopotent progenitor cell3.76e-1332
hematopoietic stem cell3.76e-1332
angioblastic mesenchymal cell3.76e-1332
hematopoietic multipotent progenitor cell3.76e-1332
connective tissue cell2.01e-0846
mesenchymal cell2.01e-0846
motile cell7.89e-0754

Uber Anatomy
Ontology termp-valuen
hemopoietic organ3.92e-3629
immune organ3.92e-3629
thymus8.23e-3323
neck8.23e-3323
respiratory system epithelium8.23e-3323
hemolymphoid system gland8.23e-3323
pharyngeal epithelium8.23e-3323
thymic region8.23e-3323
pharyngeal gland8.23e-3323
entire pharyngeal arch endoderm8.23e-3323
thymus primordium8.23e-3323
early pharyngeal endoderm8.23e-3323
hemolymphoid system1.88e-3148
immune system1.88e-3148
pharynx2.61e-3124
gland of gut2.61e-3124
upper respiratory tract2.61e-3124
chordate pharynx2.61e-3124
pharyngeal arch system2.61e-3124
pharyngeal region of foregut2.61e-3124
hematopoietic system1.38e-3045
blood island1.38e-3045
mixed endoderm/mesoderm-derived structure2.69e-2935
segment of respiratory tract1.79e-2727
respiratory tract1.16e-2141
respiratory system4.63e-2142
organ segment1.87e-2035
craniocervical region8.52e-2036
anterior region of body4.80e-1643
lateral plate mesoderm9.35e-1487
foregut2.05e-1380
gut epithelium7.76e-1255
endo-epithelium2.12e-1169
endocrine gland1.40e-1060
gland1.61e-0965
unilaminar epithelium2.51e-0966
organ part4.86e-0999
mesoderm8.94e-09120
mesoderm-derived structure8.94e-09120
presumptive mesoderm8.94e-09120
connective tissue2.01e-0846
endocrine system2.78e-0872
subdivision of digestive tract3.58e-08114
digestive system5.84e-08116
digestive tract5.84e-08116
primitive gut5.84e-08116
endoderm-derived structure9.37e-08118
endoderm9.37e-08118
presumptive endoderm9.37e-08118


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10
MA0004.12.67476
MA0006.10.00079504
MA0007.10.0164903
MA0009.10.329822
MA0014.14.82164e-17
MA0017.10.388407
MA0019.12.04179
MA0024.10.364197
MA0025.10.149784
MA0027.10.896442
MA0028.16.96124e-05
MA0029.10.626184
MA0030.11.10515
MA0031.11.68461
MA0038.10.29705
MA0040.10.125418
MA0041.10.310694
MA0042.10.107231
MA0043.10.396805
MA0046.10.152722
MA0048.10.00047414
MA0050.12.12667
MA0051.10.87923
MA0052.10.134443
MA0055.10.000225717
MA0056.10
MA0057.10.00695659
MA0058.11.23214
MA0059.10.271098
MA0060.17.49193e-07
MA0061.10.034292
MA0063.10
MA0066.10.905954
MA0067.10.0269683
MA0068.10.251359
MA0069.11.97862
MA0070.10.735527
MA0071.10.0580524
MA0072.10.208042
MA0073.10.0532613
MA0074.10.652998
MA0076.10.018612
MA0077.10.0155032
MA0078.10.756196
MA0081.11.25872
MA0083.10.595854
MA0084.10.428463
MA0087.10.300311
MA0088.10.000542044
MA0089.10
MA0090.10.0958043
MA0091.10.0338054
MA0092.10.389483
MA0093.12.88271
MA0095.10
MA0098.10
MA0100.10.0186333
MA0101.10.0538665
MA0103.10.323496
MA0105.14.09891e-06
MA0106.10.18417
MA0107.10.229705
MA0108.20.126466
MA0109.10
MA0111.11.65486
MA0113.10.794231
MA0114.10.245938
MA0115.10.0552722
MA0116.10.00149446
MA0117.10.0408468
MA0119.10.397711
MA0122.10.374436
MA0124.10.662469
MA0125.10.13519
MA0130.10
MA0131.10.0101401
MA0132.10
MA0133.10
MA0135.10.0735951
MA0136.13.49815
MA0139.10.000600077
MA0140.10.194722
MA0141.10.00625179
MA0142.11.86157
MA0143.11.31349
MA0144.11.49984
MA0145.15.91605e-05
MA0146.14.62877e-14
MA0147.10.0203316
MA0148.12.00277
MA0149.19.86249e-06
MA0062.20.0350817
MA0035.21.92474
MA0039.23.40503e-10
MA0138.20.0446286
MA0002.27.52869
MA0137.21.91645
MA0104.20.0053679
MA0047.21.61649
MA0112.23.58909e-05
MA0065.20.000251376
MA0150.10.190841
MA0151.10
MA0152.10.396319
MA0153.10.0278376
MA0154.10.00022701
MA0155.10.00326076
MA0156.16.52596
MA0157.12.17431
MA0158.10
MA0159.10.00349716
MA0160.10.0616307
MA0161.10
MA0162.13.49087e-14
MA0163.12.69211e-10
MA0164.10.214393
MA0080.28.28252
MA0018.20.0114703
MA0099.20.0756416
MA0079.20
MA0102.20.165454
MA0258.10.105338
MA0259.10.149282
MA0442.10
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