FFCP PHASE1:Hg19::chr1:206749144..206749185,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1293 | |||
|description=CAGE_peak_at_chr1:206749144..206749185,+ | |||
|id=chr1:206749144..206749185,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.05e-91!42;CL:0000860!7.12e-84!45;CL:0000766!1.31e-83!76;CL:0000839!7.55e-68!70;CL:0000557!1.07e-66!71;CL:0000738!3.59e-64!140;CL:0002194!1.08e-60!63;CL:0000576!1.08e-60!63;CL:0000040!1.08e-60!63;CL:0000559!1.08e-60!63;CL:0002009!1.93e-58!65;CL:0000763!1.01e-51!112;CL:0000049!1.01e-51!112;CL:0000037!7.90e-49!172;CL:0000566!7.90e-49!172;CL:0002087!7.18e-48!119;CL:0002031!1.88e-47!124;CL:0000988!3.88e-45!182;CL:0002032!1.24e-44!165;CL:0000837!1.24e-44!165;CL:0002393!7.47e-21!9;CL:0002397!7.47e-21!9;CL:0000094!3.16e-14!8;CL:0000134!4.62e-14!358;CL:0002320!1.86e-13!365;CL:0002274!2.12e-11!5;CL:0000457!2.12e-11!5;CL:0002191!2.12e-11!5;CL:0000097!2.12e-11!5;CL:0000831!2.12e-11!5;CL:0002028!2.12e-11!5;CL:0000219!2.44e-11!390;CL:0000081!5.45e-10!11;CL:0000048!7.63e-09!430;CL:0000034!1.45e-08!444;CL:0000723!1.71e-08!436;CL:0000875!2.58e-08!3;CL:0002396!2.58e-08!3;CL:0000767!5.21e-08!3;CL:0000775!5.33e-08!3;CL:0000842!1.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.83e-86;33!CL:0002057;2.83e-86;33!CL:0000576;1.46e-66;48!CL:0000473;7.92e-66;39!CL:0000234;7.92e-66;39!CL:0000766;4.45e-60;69!CL:0000763;4.80e-24;100!CL:0000094;5.00e-21;8!CL:0002393;8.04e-21;6!CL:0002397;8.04e-21;6!CL:0002087;4.25e-17;104!CL:0000081;5.25e-15;11!CL:0000738;7.11e-15;136!CL:0000875;7.70e-12;3!CL:0002396;7.70e-12;3!CL:0000767;2.05e-11;3!CL:0000775;2.81e-11;3!CL:0000097;3.99e-11;5!CL:0000226;1.54e-10;3!CL:0000842;1.54e-10;3!CL:0000988;3.68e-09;177!CL:0000219;6.65e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-125,42;CL:0002057,1.68e-125,42;CL:0000766,5.12e-120,72;CL:0000473,3.52e-114,48;CL:0000234,3.52e-114,48;CL:0000839,2.83e-96,66;CL:0000557,1.06e-94,67;CL:0002194,2.50e-89,59;CL:0000576,2.50e-89,59;CL:0000040,2.50e-89,59;CL:0000559,2.50e-89,59;CL:0002009,4.02e-86,61;CL:0000763,1.18e-76,108;CL:0000049,1.18e-76,108;CL:0000738,3.21e-69,136;CL:0000037,6.35e-54,168;CL:0002031,6.05e-51,120;CL:0002087,7.01e-51,115;CL:0000988,1.31e-50,177;CL:0002032,5.84e-50,161;CL:0000837,5.84e-50,161;CL:0002393,6.96e-31,9;CL:0002397,6.96e-31,9;CL:0000094,5.08e-21,8;CL:0000134,1.63e-19,354;CL:0002320,6.59e-19,361;CL:0000219,9.10e-17,386;CL:0000081,5.31e-15,11;CL:0000048,3.79e-14,427;CL:0000034,3.85e-14,441;CL:0000723,8.70e-14,433;CL:0000875,8.13e-12,3;CL:0002396,8.13e-12,3;CL:0000767,2.36e-11,3;CL:0000775,2.44e-11,3;CL:0000097,3.89e-11,5;CL:0002028,3.89e-11,5;CL:0000226,1.46e-10,3;CL:0000842,1.46e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-88;42!CL:0000049;3.61e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-82,76;UBERON:0002390,1.93e-77,98;UBERON:0003061,1.93e-77,98;UBERON:0001474,1.15e-75,82;UBERON:0002193,2.59e-69,108;UBERON:0004765,4.44e-68,90;UBERON:0002405,1.45e-65,93;UBERON:0001434,2.77e-60,100;UBERON:0002204,5.48e-32,167;UBERON:0003081,8.28e-32,203;UBERON:0002384,4.44e-18,371;UBERON:0000926,1.55e-16,315;UBERON:0004120,1.55e-16,315;UBERON:0006603,1.55e-16,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4881210118985,3.0706351847777,5.26374819274658,0,0,0,0,0,0,1.10799081706375,3.40925560699241,2.60413044859022,0,0,0,1.30858414901608,1.13362783106643,3.15359279544161,4.41615170120801,5.34518254428373,12.3882548358041,5.46615545412086,7.68482119587302,15.6078271726466,11.721353145045,14.2006630388442,25.7310324529249,2.07066573496865,1.36453075028923,7.86532195557796,9.79468455586888,6.73950956859797,25.5734850319616,2.96866170168044,2.19410023383795,6.81959600852311,3.19230162491442,3.97169657283798,4.35975574296902,3.76872997885115,7.30076085788282,15.6375968187684,0.605399502633369,0.368277635987565,11.076183560431,18.3792099091389,14.2444880976579,15.3050811221114,8.64930459828012,2.4028302854641,3.37523732063868,17.6707901119574,6.36533367037088,10.0465284570549,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,1.12101712596307,0,0,0,0,0.167186495390678,0,0,0,0.779873198196215,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.616339038092582,5.1832028885193,2.59415916150531,9.08945520669936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.99205619157746,8.97484377612075,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,5.39285502046542,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0,0.648473311192717,1.62009431171434,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:206749144..206749185,+ | |||
}} |
Revision as of 23:47, 10 January 2014
Short description: | p@chr1:206749144..206749185, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:206749144..206749185, + |
Coexpression cluster: | C1293_CD14_CD14CD16_Basophils_Mast_Eosinophils_Neutrophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.16e-82 | 76 |
hematopoietic system | 1.93e-77 | 98 |
blood island | 1.93e-77 | 98 |
bone element | 1.15e-75 | 82 |
hemolymphoid system | 2.59e-69 | 108 |
skeletal element | 4.44e-68 | 90 |
immune system | 1.45e-65 | 93 |
skeletal system | 2.77e-60 | 100 |
musculoskeletal system | 5.48e-32 | 167 |
lateral plate mesoderm | 8.28e-32 | 203 |
connective tissue | 4.44e-18 | 371 |
mesoderm | 1.55e-16 | 315 |
mesoderm-derived structure | 1.55e-16 | 315 |
presumptive mesoderm | 1.55e-16 | 315 |