FFCP PHASE1:Hg19::chr10:123358187..123358202,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2263 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3689 | |||
|TSSclassifier=strong | |||
|UniProt=P21802 | |||
|association_with_transcript=-215bp_to_ENST00000351936,ENST00000356226,ENST00000369062,NM_000141,NM_001144917,NM_001144918,NM_001144919,NM_022970,uc001lfm.2,uc001lfn.3,uc001lfo.1,uc010qtj.1,uc010qtk.1,uc010qtl.1,uc010qtm.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_FGFR2_5end | |||
|id=chr10:123358187..123358202,- | |||
|ontology_enrichment_celltype=CL:0000540!1.70e-07!6;CL:0000031!1.70e-07!6;CL:0000404!1.70e-07!6;CL:0000047!4.42e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.81e-07;6!CL:0000404;4.81e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.25e-07,6;CL:0000031,4.25e-07,6;CL:0000404,4.25e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.56e-18;82!UBERON:0006215;2.67e-09;3!UBERON:0006241;3.42e-09;3!UBERON:0003057;3.42e-09;3!CL:0000031;4.81e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-58!115;UBERON:0001017!2.05e-56!82;UBERON:0005743!1.08e-54!86;UBERON:0001049!2.23e-51!57;UBERON:0005068!2.23e-51!57;UBERON:0006241!2.23e-51!57;UBERON:0007135!2.23e-51!57;UBERON:0000073!7.93e-51!94;UBERON:0001016!7.93e-51!94;UBERON:0000955!1.86e-44!69;UBERON:0006238!1.86e-44!69;UBERON:0002616!1.13e-43!59;UBERON:0003080!1.61e-39!42;UBERON:0002780!1.34e-38!41;UBERON:0001890!1.34e-38!41;UBERON:0006240!1.34e-38!41;UBERON:0002020!3.45e-38!34;UBERON:0003528!3.45e-38!34;UBERON:0001893!3.91e-38!34;UBERON:0003075!2.45e-37!86;UBERON:0007284!2.45e-37!86;UBERON:0002791!7.15e-37!33;UBERON:0001869!2.04e-35!32;UBERON:0002346!9.49e-35!90;UBERON:0000153!1.41e-28!129;UBERON:0007811!1.41e-28!129;UBERON:0003056!2.81e-28!61;UBERON:0000033!4.02e-27!123;UBERON:0000956!4.63e-27!25;UBERON:0000203!4.63e-27!25;UBERON:0004121!5.59e-27!169;UBERON:0000924!9.15e-26!173;UBERON:0006601!9.15e-26!173;UBERON:0002619!8.66e-25!22;UBERON:0001950!1.48e-22!20;UBERON:0003076!1.29e-12!15;UBERON:0003057!1.29e-12!15;UBERON:0002308!1.58e-12!9;UBERON:0000125!1.58e-12!9;UBERON:0002420!5.69e-12!9;UBERON:0007245!5.69e-12!9;UBERON:0010009!5.69e-12!9;UBERON:0010011!5.69e-12!9;UBERON:0000454!5.69e-12!9;UBERON:0002298!1.27e-11!8;UBERON:0000025!5.23e-11!194;UBERON:0004732!2.18e-10!13;UBERON:0004111!5.14e-10!241;UBERON:0009663!6.52e-10!7;UBERON:0004733!3.73e-09!12;UBERON:0002028!3.73e-09!12;UBERON:0007277!3.73e-09!12;UBERON:0000062!5.46e-09!511;UBERON:0000922!8.92e-09!612;UBERON:0000477!1.07e-08!286;UBERON:0000200!1.57e-08!6;UBERON:0000475!2.41e-08!365;UBERON:0001871!5.56e-08!7;UBERON:0000468!9.08e-08!659;UBERON:0000064!2.15e-07!219;UBERON:0001872!2.37e-07!5;UBERON:0000481!3.24e-07!347;UBERON:0002021!3.61e-07!5;UBERON:0000349!4.71e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.78e-55;34!UBERON:0003528;6.06e-55;34!UBERON:0002020;6.06e-55;34!UBERON:0002791;1.24e-53;32!UBERON:0001869;1.65e-53;32!UBERON:0002619;7.40e-50;22!UBERON:0000073;2.72e-47;53!UBERON:0002616;2.72e-47;53!UBERON:0002780;4.26e-47;41!UBERON:0001890;4.26e-47;41!UBERON:0001950;3.02e-45;20!UBERON:0000956;2.26e-43;25!UBERON:0000203;2.26e-43;25!UBERON:0001017;5.73e-32;75!UBERON:0000955;5.93e-32;68!UBERON:0001016;5.76e-27;83!UBERON:0000125;5.14e-24;9!UBERON:0002308;5.14e-24;9!UBERON:0002420;8.05e-23;9!UBERON:0007245;8.05e-23;9!UBERON:0010009;8.05e-23;9!UBERON:0010011;8.05e-23;9!UBERON:0000454;8.05e-23;9!UBERON:0004732;4.67e-21;13!UBERON:0009663;1.19e-18;7!UBERON:0004733;1.73e-18;12!UBERON:0002028;1.73e-18;12!UBERON:0002298;9.49e-18;6!UBERON:0007023;5.13e-16;114!UBERON:0000200;7.24e-16;6!UBERON:0001872;1.97e-13;5!UBERON:0002021;4.79e-13;5!UBERON:0001871;5.98e-13;6!UBERON:0000349;9.11e-13;5!UBERON:0011216;4.34e-12;132!UBERON:0002680;2.82e-11;9!UBERON:0001895;2.82e-11;9!UBERON:0000369;1.14e-10;4!UBERON:0002435;1.14e-10;4!UBERON:0000204;1.14e-10;4!UBERON:0000988;9.25e-10;3!UBERON:0001896;1.07e-09;3!UBERON:0005290;1.07e-09;3!UBERON:0002240;3.42e-09;3!UBERON:0005174;3.42e-09;3!UBERON:0001137;3.42e-09;3!UBERON:0001870;1.16e-08;3!UBERON:0005383;2.68e-08;3!UBERON:0005382;2.68e-08;3!UBERON:0010314;3.25e-07;132!UBERON:0005162;3.26e-07;2!UBERON:0000122;3.26e-07;2!UBERON:0002148;4.61e-07;2!UBERON:0006331;4.61e-07;2!UBERON:0009662;4.61e-07;2!UBERON:0001875;5.40e-07;2!UBERON:0006514;5.40e-07;2!UBERON:0001897;7.26e-07;2!UBERON:0010225;7.26e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.44e-91,56;UBERON:0005068,1.44e-91,56;UBERON:0006241,1.44e-91,56;UBERON:0007135,1.44e-91,56;UBERON:0001017,7.26e-84,81;UBERON:0000073,7.63e-84,53;UBERON:0002616,7.63e-84,53;UBERON:0001016,1.22e-77,89;UBERON:0000955,6.90e-72,68;UBERON:0006238,6.90e-72,68;UBERON:0003528,1.01e-65,34;UBERON:0002020,1.01e-65,34;UBERON:0002780,1.10e-65,41;UBERON:0001890,1.10e-65,41;UBERON:0003080,1.10e-65,41;UBERON:0006240,1.10e-65,41;UBERON:0001893,1.28e-65,34;UBERON:0003075,7.34e-65,82;UBERON:0007284,7.34e-65,82;UBERON:0002346,2.88e-61,86;UBERON:0002791,2.52e-60,32;UBERON:0001869,3.74e-60,32;UBERON:0007023,3.02e-50,114;UBERON:0002619,8.20e-50,22;UBERON:0010371,1.71e-48,104;UBERON:0003056,4.41e-47,61;UBERON:0001950,3.31e-45,20;UBERON:0000956,2.47e-43,25;UBERON:0000203,2.47e-43,25;UBERON:0010314,2.18e-37,132;UBERON:0004121,2.35e-37,171;UBERON:0000924,2.35e-37,171;UBERON:0006601,2.35e-37,171;UBERON:0011216,4.98e-37,223;UBERON:0003076,1.21e-25,15;UBERON:0003057,1.21e-25,15;UBERON:0000125,5.29e-24,9;UBERON:0002308,5.29e-24,9;UBERON:0000025,1.06e-23,192;UBERON:0002420,7.36e-23,9;UBERON:0007245,7.36e-23,9;UBERON:0010009,7.36e-23,9;UBERON:0010011,7.36e-23,9;UBERON:0000454,7.36e-23,9;UBERON:0004732,5.09e-21,13;UBERON:0009663,1.22e-18,7;UBERON:0004733,1.88e-18,12;UBERON:0002028,1.88e-18,12;UBERON:0007277,1.88e-18,12;UBERON:0002298,9.78e-18,6;UBERON:0004111,2.71e-17,240;UBERON:0000200,8.16e-16,6;UBERON:0001872,2.05e-13,5;UBERON:0002021,4.86e-13,5;UBERON:0001871,5.73e-13,6;UBERON:0000349,8.34e-13,5;UBERON:0000483,2.70e-12,306;UBERON:0000119,4.75e-12,309;UBERON:0002680,2.98e-11,9;UBERON:0001895,2.98e-11,9;UBERON:0010092,2.98e-11,9;UBERON:0000369,1.17e-10,4;UBERON:0002435,1.17e-10,4;UBERON:0000204,1.17e-10,4;UBERON:0010082,1.17e-10,4;UBERON:0000988,9.26e-10,3;UBERON:0001896,1.10e-09,3;UBERON:0005290,1.10e-09,3;UBERON:0010096,1.10e-09,3;UBERON:0002240,2.99e-09,3;UBERON:0005174,2.99e-09,3;UBERON:0001137,2.99e-09,3;UBERON:0001870,1.31e-08,3;UBERON:0005383,2.72e-08,3;UBERON:0005382,2.72e-08,3;UBERON:0000922,2.61e-07,592;UBERON:0005162,3.26e-07,2;UBERON:0000122,3.26e-07,2;UBERON:0002148,4.61e-07,2;UBERON:0006331,4.61e-07,2;UBERON:0009662,4.61e-07,2;UBERON:0000923,5.37e-07,560;UBERON:0010316,5.37e-07,560;UBERON:0005291,5.37e-07,560;UBERON:0006598,5.37e-07,560;UBERON:0010317,5.37e-07,560;UBERON:0002532,5.37e-07,560;UBERON:0001875,5.48e-07,2;UBERON:0006514,5.48e-07,2;UBERON:0001897,6.87e-07,2;UBERON:0010225,6.87e-07,2;UBERON:0002050,7.76e-07,564;UBERON:0005423,9.89e-07,581 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0.087834785693126,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42003837006646,0.10075209822764,0,0,0,0,0.487894824518382,1.06023814657188,0.232387885739037,0.932949495138334,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,2.95394953340702,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,6.95959931499926,2.51274398001523,7.01732626818479,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,14.4212496022089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0.296964680832639,0,1.9882952955326,3.37606599385231,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,11.6319929531426,6.95760736213884,3.99227596002388,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,6.20018970069687,2.05013945663194,12.2065389053667,9.17807857429164,12.1174523770954,4.60709334023342,0,0.278847488557207,0.153900517007594,0,0.23056390438806,0.359030577639089,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,1.99052386215701,0.353830258013357,0,0,0,0,31.8133347668796,0,18.9754201037525,0,0,0.485560759068186,0.394584402849391,0,5.50930970934882,0.695052375913368,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,7.85479527554352,0.90392296312213,0,0,6.01452561580848,0,0,1.49417096317547,0,0.144090417154106,0.458146384663663,0,0,0,0,0,0,0,0,15.0105072177447,20.398901454907,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,3.97614844904652,5.17572943223987,0.643012593860077,0.275078873194468,1.66176135211674,0,0,5.46746009922222,0,0.551639951094387,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,26.1151571850332,17.5869360317778,0,0,0.213574825135389,0.943225830597996,2.48543433208317,0,0,0,0,0,0,0.306345576763462,0,0,5.31640907980192,2.07444650333337,5.00763722825999,18.3490942620823,13.3114861844223,29.0611165765675,0.830091809617385,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0.345430341731199,0,8.01898929680038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,6.35869328454949,2.8339315265117,6.38535436228605,7.17907274842643,1.26035848110859,9.75117259745472,8.55820921848811,69.9570159269856,0,0,0,0.462102664601353,0,0,0.994581110581374,0.0752103283492573,0,0,0,0,0,9.86048735428562,3.90539049306924,4.75379631952723,9.38553990869821,4.37579847214576,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,18.7596463016056,10.1290071286788,0,0,0.156986185701028,2.98519620840404,0,0,0,0,2.85906176706625,0.158013611732727,0,0,0,0,0,0,2.15113679410139,0,0,0.423387050190929,1.60374807980835,0,0,0.223710863595585,16.0966383128998,0.243835849964539,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0.0771741581079447,0,0,0.245148321753905,0,48.2918829102765,16.6345984183168,2.9585900930838,0,0,0.128915775947154,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,20.4975603906575,0,9.58680011691897,2.18175345170189,0.5290268405154,0,0,0,0.378499274505237,0.109265571963696,0,0,0.534434810531121,0.36757959813938,0.250707539292375,0.151557396436479,0.803892390468535,12.4375415918817,16.756145329627,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.25458863311266,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0.332660356546013,0,0,0,0,0,0.488965776731466,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@FGFR2 | |||
}} |
Revision as of 05:20, 11 January 2014
Short description: | p3@FGFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGFR2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -215bp_to_ENST00000351936, ENST00000356226, ENST00000369062, NM_000141, NM_001144917, NM_001144918, NM_001144919, NM_022970, uc001lfm.2, uc001lfn.3, uc001lfo.1, uc010qtj.1, uc010qtk.1, uc010qtl.1, uc010qtm.1_5end |
EntrezGene: | FGFR2 |
HGNC: | 3689 |
UniProt: | P21802 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.25e-07 | 6 |
neuroblast | 4.25e-07 | 6 |
electrically signaling cell | 4.25e-07 | 6 |