FFCP PHASE1:Hg19::chr12:28116097..28116116,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C812 | |||
|description=CAGE_peak_at_chr12:28116097..28116116,- | |||
|id=chr12:28116097..28116116,- | |||
|ontology_enrichment_celltype=CL:0002076!2.29e-16!43;CL:0002368!3.95e-13!13;CL:0000223!7.55e-13!59;CL:0000244!1.70e-10!4;CL:0000731!1.70e-10!4;CL:0002166!1.90e-08!3;CL:0002621!2.30e-08!3;CL:0000066!3.49e-08!254;CL:0002328!1.37e-07!3;CL:0002251!2.76e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.28e-36;4!CL:0000731;2.28e-36;4!CL:0002166;2.60e-28;3!CL:0002621;3.76e-28;3!CL:0002076;6.82e-17;42!CL:0002159;2.43e-16;14!CL:0002368;2.19e-11;13!CL:0002251;3.15e-11;20!CL:0000312;2.88e-08;5!CL:0000240;5.02e-07;6!CL:0000311;5.02e-07;6!CL:0000079;5.02e-07;6!CL:0000237;5.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.51e-36,4;CL:0000731,1.51e-36,4;CL:0002166,1.71e-28,3;CL:0002621,3.59e-28,3;CL:0002076,4.26e-20,42;CL:0002159,2.43e-16,14;CL:0000223,3.79e-14,58;CL:0000066,8.57e-13,253;CL:0002368,2.28e-11,13;CL:0002251,3.26e-11,20;CL:0000312,3.40e-08,5;CL:0000240,5.75e-07,6;CL:0000311,5.75e-07,6;CL:0000079,5.75e-07,6;CL:0000237,5.75e-07,6;CL:0000036,5.75e-07,6;CL:0000357,5.75e-07,6;CL:0000114,5.75e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;5.55e-08;58!CL:0000357;5.02e-07;6!CL:0000114;5.02e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!3.81e-12!5;UBERON:0005910!4.97e-10!6;UBERON:0000161!2.23e-09!35;UBERON:0004119!2.45e-09!169;UBERON:0000925!2.45e-09!169;UBERON:0006595!2.45e-09!169;UBERON:0001004!2.58e-09!72;UBERON:0001949!2.30e-08!3;UBERON:0000165!1.37e-07!28;UBERON:0000930!1.37e-07!28;UBERON:0004815!1.37e-07!3;UBERON:0002031!1.37e-07!3;UBERON:0003729!2.07e-07!5;UBERON:0000166!3.02e-07!21;UBERON:0007196!5.76e-07!14;UBERON:0001558!5.76e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.24e-36;12!UBERON:0000365;3.57e-29;5!UBERON:0001949;3.76e-28;3!UBERON:0005910;2.27e-24;6!UBERON:0001708;2.09e-21;4!UBERON:0008895;2.09e-21;4!UBERON:0011159;2.98e-17;5!UBERON:0003929;2.02e-12;7!UBERON:0003729;1.88e-11;13!UBERON:0003350;6.18e-11;8!UBERON:0001828;6.18e-11;8!UBERON:0005911;6.81e-09;36!UBERON:0011137;3.94e-08;11!UBERON:0010323;3.94e-08;11!UBERON:0000161;6.92e-08;19!UBERON:0000166;6.92e-08;19!UBERON:0000344;1.69e-07;20!UBERON:0010371;2.80e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.57e-29,5;UBERON:0001949,3.59e-28,3;UBERON:0005910,1.73e-24,6;UBERON:0001708,1.53e-21,4;UBERON:0008895,1.53e-21,4;UBERON:0011159,2.33e-17,5;UBERON:0010188,1.45e-14,6;UBERON:0002539,1.45e-14,6;UBERON:0008816,1.45e-14,6;UBERON:0003729,1.94e-11,13;UBERON:0003350,6.07e-11,8;UBERON:0001828,6.07e-11,8;UBERON:0004119,3.61e-10,160;UBERON:0000925,3.61e-10,160;UBERON:0006595,3.61e-10,160;UBERON:0003102,1.91e-09,99;UBERON:0000161,1.05e-08,36;UBERON:0010323,3.53e-08,11;UBERON:0005911,9.07e-08,82;UBERON:0000344,1.72e-07,20;UBERON:0000033,2.64e-07,56;UBERON:0001004,7.69e-07,74;UBERON:0000166,8.04e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,4.63668405004419,3.15485054927904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58501712451753,0,1.00528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,5.71139235876122,7.23052995936171,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0,11.0278558666807,0.368323955743585,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740779938543,1.53752053892085,1.02090169995667,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.865999014529609,0,3.26672954583968,0,4.3050537267123,1.68471475667626,3.10401107475673,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,3.18621655199399,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0.494255755786011,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.640358984218058,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0.610131324509816,0.1251909307065,0.573409195690071,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0.707818340086442,1.10057159113007,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,1.22354542081276,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:28116097..28116116,- | |||
}} |
Revision as of 12:48, 11 January 2014
Short description: | p@chr12:28116097..28116116, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28116097..28116116, - |
Coexpression cluster: | C812_Prostate_Urothelial_Mallassezderived_Sebocyte_Keratinocyte_Gingival_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.51e-36 | 4 |
urothelial cell | 1.51e-36 | 4 |
epithelial cell of Malassez | 1.71e-28 | 3 |
gingival epithelial cell | 3.59e-28 | 3 |
endo-epithelial cell | 4.26e-20 | 42 |
general ecto-epithelial cell | 2.43e-16 | 14 |
endodermal cell | 3.79e-14 | 58 |
epithelial cell | 8.57e-13 | 253 |
respiratory epithelial cell | 2.28e-11 | 13 |
epithelial cell of alimentary canal | 3.26e-11 | 20 |
keratinocyte | 3.40e-08 | 5 |
stratified squamous epithelial cell | 5.75e-07 | 6 |
keratin accumulating cell | 5.75e-07 | 6 |
stratified epithelial cell | 5.75e-07 | 6 |
keratinizing barrier epithelial cell | 5.75e-07 | 6 |
epithelial fate stem cell | 5.75e-07 | 6 |
stratified epithelial stem cell | 5.75e-07 | 6 |
surface ectodermal cell | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.57e-29 | 5 |
gingival epithelium | 3.59e-28 | 3 |
transitional epithelium | 1.73e-24 | 6 |
jaw skeleton | 1.53e-21 | 4 |
splanchnocranium | 1.53e-21 | 4 |
primary subdivision of cranial skeletal system | 2.33e-17 | 5 |
protuberance | 1.45e-14 | 6 |
pharyngeal arch | 1.45e-14 | 6 |
embryonic head | 1.45e-14 | 6 |
mouth mucosa | 1.94e-11 | 13 |
epithelium of mucosa | 6.07e-11 | 8 |
gingiva | 6.07e-11 | 8 |
endoderm-derived structure | 3.61e-10 | 160 |
endoderm | 3.61e-10 | 160 |
presumptive endoderm | 3.61e-10 | 160 |
surface structure | 1.91e-09 | 99 |
orifice | 1.05e-08 | 36 |
cranial skeletal system | 3.53e-08 | 11 |
endo-epithelium | 9.07e-08 | 82 |
mucosa | 1.72e-07 | 20 |
head | 2.64e-07 | 56 |
respiratory system | 7.69e-07 | 74 |
oral opening | 8.04e-07 | 22 |