FFCP PHASE1:Hg19::chr16:67564182..67564203,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C992 | |||
|description=CAGE_peak_at_chr16:67564182..67564203,- | |||
|id=chr16:67564182..67564203,- | |||
|ontology_enrichment_celltype=CL:0000557!5.88e-15!71;CL:0000839!1.15e-14!70;CL:0002009!1.43e-14!65;CL:0000766!1.81e-14!76;CL:0002057!2.32e-14!42;CL:0002194!5.42e-14!63;CL:0000576!5.42e-14!63;CL:0000040!5.42e-14!63;CL:0000559!5.42e-14!63;CL:0000860!5.56e-14!45;CL:0000738!5.51e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.59e-10;48!CL:0000766;1.69e-09;69!CL:0000860;1.83e-09;33!CL:0002057;1.83e-09;33!CL:0000473;6.79e-09;39!CL:0000234;6.79e-09;39!CL:0000236;4.52e-08;13!CL:0000784;5.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.41e-19,72;CL:0000557,5.48e-18,67;CL:0000839,5.12e-17,66;CL:0002009,3.35e-16,61;CL:0000860,1.01e-15,42;CL:0002057,1.01e-15,42;CL:0002194,1.20e-15,59;CL:0000576,1.20e-15,59;CL:0000040,1.20e-15,59;CL:0000559,1.20e-15,59;CL:0000473,2.26e-15,48;CL:0000234,2.26e-15,48;CL:0000738,5.40e-15,136;CL:0002031,1.85e-12,120;CL:0000988,5.85e-11,177;CL:0002087,7.75e-11,115;CL:0000763,3.75e-10,108;CL:0000049,3.75e-10,108;CL:0000037,1.08e-09,168;CL:0002032,1.84e-08,161;CL:0000837,1.84e-08,161;CL:0002393,8.36e-08,9;CL:0002397,8.36e-08,9;CL:0000236,1.09e-07,14;CL:0000784,6.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.22e-14!80;UBERON:0001474!9.46e-13!86;UBERON:0002390!9.03e-12!102;UBERON:0003061!9.03e-12!102;UBERON:0004765!6.79e-11!101;UBERON:0001434!6.79e-11!101;UBERON:0002193!2.76e-09!112;UBERON:0002204!7.34e-09!167;UBERON:0001950!3.72e-07!20;UBERON:0003081!4.53e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.68e-12;20!UBERON:0002619;1.52e-10;22!UBERON:0000956;6.49e-09;25!UBERON:0000203;6.49e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.32e-17,76;UBERON:0001474,5.96e-15,82;UBERON:0004765,9.47e-13,90;UBERON:0002390,9.82e-13,98;UBERON:0003061,9.82e-13,98;UBERON:0001950,4.81e-12,20;UBERON:0002405,4.98e-12,93;UBERON:0001434,2.36e-11,100;UBERON:0002619,1.13e-10,22;UBERON:0002193,1.24e-10,108;UBERON:0000956,5.03e-09,25;UBERON:0000203,5.03e-09,25;UBERON:0003081,1.42e-08,203;UBERON:0003528,1.00e-06,34;UBERON:0002020,1.00e-06,34 | |||
|phase1_expression=1.45342703416445,1.07050261945492,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0.245733936501509,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,1.22400414746552,0.626909442956176,0.286235987131057,0.273748850145768,0.376627918784408,0.458480434487708,0,0.236132343941038,1.96682138424452,0,1.85779347979291,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0.293600439334847,0,1.00272223735071,1.08505435357926,1.34349284543955,0.647787332037959,0.257575567634187,1.01778767145695,1.51150377475524,3.39617685662943,1.62700325833979,1.6446715520873,2.78735733805593,0.575384784644301,0.768482119587302,0.47296445977717,1.03423704220986,2.5819387343353,1.35426486594342,1.69418105588344,2.45615535052061,1.34834090667051,1.22433556948361,1.28371610830437,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,1.16083695451434,0.56738522469114,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0,0.368277635987565,0.949387162322653,1.90129757680748,0.850417199860174,1.46761051855863,1.57260083605093,0.750884464207532,0.64290234678832,2.28010194992999,1.59133341759272,1.0959849225878,1.75996244461323,1.63841583378639,2.66852776159066,4.26730222566507,2.80277190925209,0,0,0.954053754535364,13.6611112586268,9.98303221930596,11.0859236156316,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.869079113764942,0.795285947051099,0.486634870302636,0.283604451492204,0.443458794925128,0.351339142772504,0.851363990735132,0,0,1.29818957461873,0,1.19662164466979,7.87019060207628,11.4398982156026,12.6295550452052,0,0,0,1.69592382577203,0,1.6507082516404,0.626984899610432,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.366403487860815,0,3.87780264148325,0.872188104285069,1.49091585508596,0,0.529636723252875,1.14734648299525,0,0.560677600142307,1.06748995729705,0.98667019366864,0,0.404132016209064,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,0.448346041655403,0.117434498643765,0.485618833104395,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.558350568994769,0,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,0.10075209822764,0,0.386521706326594,0,0,0.243947412259191,0,0.116193942869518,0.310983165046111,0.504641701751257,0,1.56449532329816,0,0,0.928735856063958,0,0.946454400318751,0.674338760312407,0.241011029883482,0.55146986366197,0,0,0.539325232640658,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0.380508304469197,0,0,0.738651018262192,0.936017060556951,0.891786973732369,0,0.16798212819886,0,0.179117045405697,0,1.15014803749563,0,0.44024217006613,1.86595303986695,1.44119953416961,2.90357596880674,0.507983154337352,1.52795370223311,4.68869788840188,0,0.514137463516618,0.300343057843917,0.857479297891735,0.112131084345361,0.43596006883328,0.2933531432838,0.258543431515556,0,0.845302752556,1.32969058292435,3.12022310734098,1.02882949704857,1.41849132023278,0.532844358032199,0.285955987316295,0.542621605391443,0,0,0,0,0.301439377059586,0,0.499864955910285,1.2162378064119,1.00451418286425,0,0,2.29723871668228,0,0.289562613335158,0.821905290201534,0.179060963239896,0,0,0.646882724578552,0.256686072559497,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,2.14114786556594,0.788512075169673,0.937131319941706,0,4.5481500811197,0,0,0.184369168541703,0.173767228936166,1.17480694477644,1.02943027143257,0.206768026122887,2.5885704098234,0.853820462427555,0.303127571446259,0,0.30239029332968,1.24053903909388,0.460385919864187,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0,0,0.246381468041427,0,0.116210378459959,0,0,0.184161977871793,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,1.13733384070897,0.510281115829547,0.215915916102139,0,0,1.00337954770971,0,0.831076008928724,0.671624264166535,0,0.784306353074702,0.512900250232778,0,0,0.309123034943167,0.457847324091717,0.247528499761764,1.14853107599234,0.650060246036521,0,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.644521469209642,0.870100163485371,0.255679882248303,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0.30347334256665,0.464845549297286,1.2592493873225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| |||
|short_description=p@chr16:67564182..67564203,- | |||
}} |
Revision as of 11:55, 20 January 2014
Short description: | p@chr16:67564182..67564203, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67564182..67564203, - |
Coexpression cluster: | C992_Dendritic_melanoma_immature_CD19_Basophils_CD14_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.41e-19 | 72 |
granulocyte monocyte progenitor cell | 5.48e-18 | 67 |
myeloid lineage restricted progenitor cell | 5.12e-17 | 66 |
macrophage dendritic cell progenitor | 3.35e-16 | 61 |
classical monocyte | 1.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-15 | 42 |
monopoietic cell | 1.20e-15 | 59 |
monocyte | 1.20e-15 | 59 |
monoblast | 1.20e-15 | 59 |
promonocyte | 1.20e-15 | 59 |
defensive cell | 2.26e-15 | 48 |
phagocyte | 2.26e-15 | 48 |
leukocyte | 5.40e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.85e-12 | 120 |
hematopoietic cell | 5.85e-11 | 177 |
nongranular leukocyte | 7.75e-11 | 115 |
myeloid cell | 3.75e-10 | 108 |
common myeloid progenitor | 3.75e-10 | 108 |
hematopoietic stem cell | 1.08e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.84e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-08 | 161 |
intermediate monocyte | 8.36e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.36e-08 | 9 |
B cell | 1.09e-07 | 14 |
plasmacytoid dendritic cell | 6.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.32e-17 | 76 |
bone element | 5.96e-15 | 82 |
skeletal element | 9.47e-13 | 90 |
hematopoietic system | 9.82e-13 | 98 |
blood island | 9.82e-13 | 98 |
neocortex | 4.81e-12 | 20 |
immune system | 4.98e-12 | 93 |
skeletal system | 2.36e-11 | 100 |
regional part of cerebral cortex | 1.13e-10 | 22 |
hemolymphoid system | 1.24e-10 | 108 |
cerebral cortex | 5.03e-09 | 25 |
pallium | 5.03e-09 | 25 |
lateral plate mesoderm | 1.42e-08 | 203 |
brain grey matter | 1.00e-06 | 34 |
gray matter | 1.00e-06 | 34 |