FFCP PHASE1:Hg19::chr16:77822451..77822469,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29315 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ6 | |||
|association_with_transcript=-13bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | |||
|coexpression_cluster_id=C3590 | |||
|description=CAGE_peak_2_at_VAT1L_5end | |||
|id=chr16:77822451..77822469,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.90e-14!180;CL:0000192!5.28e-09!42;CL:0000514!5.28e-09!42;CL:0000393!6.57e-09!60;CL:0000211!6.57e-09!60;CL:0000183!2.25e-08!59;CL:0000057!4.92e-08!75;CL:0002539!8.80e-08!10;CL:0000187!1.40e-07!54;CL:0002620!6.76e-07!23;CL:0000359!8.93e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.06e-08;10!CL:0000192;4.12e-07;43!CL:0000359;4.20e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.88e-10,43;CL:0000514,4.88e-10,43;CL:0002539,3.14e-08,10;CL:0000393,6.96e-08,61;CL:0000211,6.96e-08,61;CL:0000359,1.50e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.12e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;3.97e-20;53!UBERON:0002616;3.97e-20;53!UBERON:0003528;1.00e-18;34!UBERON:0002020;1.00e-18;34!UBERON:0001893;2.07e-18;34!UBERON:0001869;2.73e-18;32!UBERON:0002791;4.37e-18;32!UBERON:0002780;1.11e-17;41!UBERON:0001890;1.11e-17;41!UBERON:0001017;4.18e-15;75!UBERON:0000956;1.27e-14;25!UBERON:0000203;1.27e-14;25!UBERON:0000955;5.25e-14;68!UBERON:0002619;4.05e-13;22!UBERON:0001016;6.12e-13;83!UBERON:0004732;6.98e-13;13!UBERON:0001950;4.14e-12;20!UBERON:0004733;6.07e-12;12!UBERON:0002028;6.07e-12;12!UBERON:0000947;1.99e-09;21!UBERON:0010191;1.99e-09;21!UBERON:0002680;5.03e-09;9!UBERON:0001895;5.03e-09;9!UBERON:0000125;9.68e-09;9!UBERON:0002308;9.68e-09;9!UBERON:0001135;2.22e-08;15!UBERON:0004237;3.06e-08;10!UBERON:0004695;3.06e-08;10!UBERON:0002111;3.06e-08;10!UBERON:0004178;3.06e-08;10!UBERON:0002420;4.37e-08;9!UBERON:0007245;4.37e-08;9!UBERON:0010009;4.37e-08;9!UBERON:0010011;4.37e-08;9!UBERON:0000454;4.37e-08;9!UBERON:0002104;8.69e-08;21!UBERON:0004573;1.64e-07;33!UBERON:0004571;1.64e-07;33!UBERON:0002298;2.01e-07;6!UBERON:0000970;5.01e-07;20!UBERON:0001032;7.10e-07;24!UBERON:0004456;7.10e-07;24!UBERON:0009663;8.33e-07;7!UBERON:0001637;9.70e-07;42!UBERON:0003509;9.70e-07;42!UBERON:0004572;9.70e-07;42 | |||
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| |||
|short_description=p2@VAT1L | |||
}} |
Revision as of 12:21, 20 January 2014
Short description: | p2@VAT1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | -13bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.88e-10 | 43 |
smooth muscle myoblast | 4.88e-10 | 43 |
aortic smooth muscle cell | 3.14e-08 | 10 |
electrically responsive cell | 6.96e-08 | 61 |
electrically active cell | 6.96e-08 | 61 |
vascular associated smooth muscle cell | 1.50e-07 | 32 |