FFCP PHASE1:Hg19::chr16:90023641..90023698,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_at_chr16:90023641..90023698,+ | |||
|id=chr16:90023641..90023698,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.99e-63!76;CL:0002194!3.02e-58!63;CL:0000576!3.02e-58!63;CL:0000040!3.02e-58!63;CL:0000559!3.02e-58!63;CL:0002009!9.26e-58!65;CL:0000557!3.03e-53!71;CL:0000763!8.38e-52!112;CL:0000049!8.38e-52!112;CL:0000839!2.86e-50!70;CL:0002057!1.62e-47!42;CL:0000738!2.69e-45!140;CL:0000037!1.04e-44!172;CL:0000566!1.04e-44!172;CL:0000860!3.08e-43!45;CL:0000988!1.74e-40!182;CL:0002032!3.77e-40!165;CL:0000837!3.77e-40!165;CL:0002087!1.33e-39!119;CL:0002031!5.22e-34!124;CL:0002393!2.40e-12!9;CL:0002397!2.40e-12!9;CL:0000094!6.76e-12!8;CL:0000134!3.75e-09!358;CL:0002320!1.68e-08!365;CL:0000081!5.24e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.01e-51;48!CL:0000473;3.55e-50;39!CL:0000234;3.55e-50;39!CL:0000860;7.88e-49;33!CL:0002057;7.88e-49;33!CL:0000766;3.47e-42;69!CL:0000763;9.39e-23;100!CL:0000094;5.35e-18;8!CL:0000738;7.66e-15;136!CL:0002087;2.04e-14;104!CL:0002393;3.90e-13;6!CL:0002397;3.90e-13;6!CL:0000235;1.15e-12;6!CL:0000081;1.40e-12;11!CL:0000988;1.55e-10;177!CL:0000775;4.23e-08;3!CL:0000219;2.44e-07;193!CL:0000767;2.45e-07;3!CL:0000875;3.21e-07;3!CL:0002396;3.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.27e-106,72;CL:0002194,4.32e-98,59;CL:0000576,4.32e-98,59;CL:0000040,4.32e-98,59;CL:0000559,4.32e-98,59;CL:0002009,2.30e-94,61;CL:0000557,6.33e-88,67;CL:0000839,5.02e-86,66;CL:0000473,3.15e-83,48;CL:0000234,3.15e-83,48;CL:0000763,1.41e-76,108;CL:0000049,1.41e-76,108;CL:0000860,1.50e-71,42;CL:0002057,1.50e-71,42;CL:0000738,9.52e-67,136;CL:0000037,1.39e-58,168;CL:0002087,1.29e-57,115;CL:0000988,1.53e-54,177;CL:0002032,4.93e-53,161;CL:0000837,4.93e-53,161;CL:0002031,1.48e-48,120;CL:0002393,1.07e-18,9;CL:0002397,1.07e-18,9;CL:0000094,5.60e-18,8;CL:0000134,1.29e-17,354;CL:0002320,7.07e-17,361;CL:0000219,2.70e-14,386;CL:0000235,1.27e-12,6;CL:0000081,1.45e-12,11;CL:0000048,1.00e-11,427;CL:0000723,2.74e-11,433;CL:0000034,1.00e-10,441;CL:0000775,4.23e-08,3;CL:0000767,2.56e-07,3;CL:0000875,3.15e-07,3;CL:0002396,3.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-51;42!CL:0000049;1.14e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.21e-59!102;UBERON:0003061!7.21e-59!102;UBERON:0002193!2.48e-54!112;UBERON:0002371!2.52e-46!80;UBERON:0001474!1.50e-41!86;UBERON:0002405!3.73e-36!115;UBERON:0004765!3.75e-32!101;UBERON:0001434!3.75e-32!101;UBERON:0003081!4.40e-21!216;UBERON:0007023!5.56e-16!115;UBERON:0002204!1.01e-14!167;UBERON:0000178!4.52e-12!15;UBERON:0000179!4.52e-12!15;UBERON:0000463!4.52e-12!15;UBERON:0002384!5.04e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.23e-19;15!UBERON:0000179;4.23e-19;15!UBERON:0000463;4.23e-19;15!UBERON:0002390;5.31e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-92,98;UBERON:0003061,1.30e-92,98;UBERON:0002193,8.32e-85,108;UBERON:0002371,1.35e-75,76;UBERON:0001474,7.21e-69,82;UBERON:0002405,1.25e-65,93;UBERON:0004765,2.77e-61,90;UBERON:0001434,1.67e-53,100;UBERON:0003081,2.71e-38,203;UBERON:0002204,1.11e-27,167;UBERON:0000926,3.58e-19,315;UBERON:0004120,3.58e-19,315;UBERON:0006603,3.58e-19,315;UBERON:0000178,4.38e-19,15;UBERON:0000179,4.38e-19,15;UBERON:0000463,4.38e-19,15;UBERON:0002384,1.45e-16,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0141997517693,7.29275856384704,9.13415127564848,0,0,0,0.232401601740905,0,0.293600439334847,17.1738576644882,8.42286679374595,11.9355978893719,3.13481663935894,2.59114932815184,6.69696475848885,5.81592955118259,4.91238726795452,6.54976965207104,3.25400651667958,4.11167888021826,2.78735733805593,1.43846196161075,3.33008918487831,4.49316236788312,4.13694816883942,1.93645405075148,4.06279459783025,4.1413314699373,4.36649840092553,3.59557575112135,4.28517449319264,4.17207735198922,3.19668562899521,3.62836430205388,4.3882004676759,3.83602275479425,1.7412554317715,3.40431134814684,0.622822248995575,4.01997864410789,3.65038042894141,4.77815458351257,3.02699751316684,4.05105399586321,2.84816148696796,5.91514801673437,11.6932364980774,10.063614984402,20.3314822375156,20.7244112121279,13.6616748692518,9.69043328720245,7.75775041076451,6.57590953552682,0,1.09227722252426,0,3.84057200309856,0,0.574752439954483,1.32208974556972,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.752875595388864,0.511946444617674,0,2.36777252044017,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,30.8320023971949,32.7363906122622,24.5972226959901,1.19245312152671,2.85997455390064,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.534125230819,34.9002237733493,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87894419479671,13.1042388477973,14.8631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,7.03159928004977,8.43335757932127,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0.167516265334349,0,38.9483652452535,41.8826042885635,49.7298616123242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,8.84428223356329,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,12.1787426215721,16.0573813499899,30.1913009202306,16.914456057503,17.2772154696202,13.6179395350471,13.5007859309529,33.3112574043594,0,0,0,0,0,0,0,0,0.5745161103971,0,0.324621940274555,0,0.456469358066384,0.626719583092093,0,0,0.1605880751037,0,2.55507742614196,1.37402137902306,2.76516687877612,5.14455048152557,3.67068111766199,2.34465714482448,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0.0986434056369336,16.7638164642858,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65383634439649,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,5.10986352267889,0,0,0.558564802544508,0.458320848023367,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.26446520348538,0,0,1.17466153824464,0,2.07119527673598,2.97699613087171,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0.625954653532499,1.14681839138014,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.196308467114945,0,0,0,1.87967835959707,1.54698931136585,0,0,0,0,0,0.917458566809082,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0.639701945702943,0,0.193766729508018,0.248298857183432,0,0.0636471582781649,0.202117188958219,0.435433495793923,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | |||
|short_description=p@chr16:90023641..90023698,+ | |||
}} |
Revision as of 12:53, 20 January 2014
Short description: | p@chr16:90023641..90023698, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:90023641..90023698, + |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.30e-92 | 98 |
blood island | 1.30e-92 | 98 |
hemolymphoid system | 8.32e-85 | 108 |
bone marrow | 1.35e-75 | 76 |
bone element | 7.21e-69 | 82 |
immune system | 1.25e-65 | 93 |
skeletal element | 2.77e-61 | 90 |
skeletal system | 1.67e-53 | 100 |
lateral plate mesoderm | 2.71e-38 | 203 |
musculoskeletal system | 1.11e-27 | 167 |
mesoderm | 3.58e-19 | 315 |
mesoderm-derived structure | 3.58e-19 | 315 |
presumptive mesoderm | 3.58e-19 | 315 |
blood | 4.38e-19 | 15 |
haemolymphatic fluid | 4.38e-19 | 15 |
organism substance | 4.38e-19 | 15 |
connective tissue | 1.45e-16 | 371 |