FFCP PHASE1:Hg19::chr17:42733803..42733843,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284071 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26670 | |||
|TSSclassifier=strong | |||
|UniProt=A2RUB1 | |||
|association_with_transcript=0bp_to_ENST00000409122_5end | |||
|coexpression_cluster_id=C3639 | |||
|description=CAGE_peak_1_at_C17orf104_5end | |||
|id=chr17:42733803..42733843,+ | |||
|ontology_enrichment_celltype=CL:0000039!6.34e-12!7;CL:0000586!6.34e-12!7;CL:0002322!8.07e-09!5;CL:1000449!6.66e-08!16;CL:0000066!7.72e-08!254;CL:1000507!2.28e-07!12;CL:1000494!2.28e-07!12;CL:1000497!8.74e-07!18;CL:0002518!8.74e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.23e-14;5!CL:0000039;3.19e-11;7!CL:0000586;3.19e-11;7!CL:1000507;4.17e-09;10!CL:1000494;4.17e-09;10!CL:0000239;1.24e-08;3!CL:1000615;1.24e-08;3!CL:0002306;1.24e-08;3!CL:0002535;1.52e-07;2!CL:0000082;5.70e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.68e-14,5;CL:0000039,4.07e-11,7;CL:0000586,4.07e-11,7;CL:1000507,5.20e-09,10;CL:1000494,5.20e-09,10;CL:0000239,1.48e-08,3;CL:1000615,1.48e-08,3;CL:0002306,1.48e-08,3;CL:0000066,1.22e-07,253;CL:0002535,1.52e-07,2;CL:0000082,6.20e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.54e-11;10!UBERON:0005564;4.54e-11;10 | |||
|ontology_enrichment_disease=DOID:0050687!3.28e-13!143;DOID:162!1.35e-11!235;DOID:14566!5.19e-11!239;DOID:305!1.38e-10!106;DOID:0050615!2.10e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1324;4.02e-09;15!DOID:0050615;1.75e-08;16!DOID:3095;1.50e-07;22!DOID:2994;1.50e-07;22!DOID:1325;2.13e-07;7!DOID:3904;2.13e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.40e-13,106;DOID:0050687,7.25e-13,143;DOID:162,6.85e-10,235;DOID:14566,1.72e-09,239;DOID:1324,4.49e-09,15;DOID:0050615,1.94e-08,16;DOID:3095,1.58e-07,22;DOID:2994,1.58e-07,22;DOID:1325,2.26e-07,7;DOID:3904,2.26e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.64e-11!27;UBERON:0003918!4.64e-11!27;UBERON:0005095!4.64e-11!27;UBERON:0007687!4.64e-11!27;UBERON:0003886!5.57e-09!63;UBERON:0006555!9.24e-09!17;UBERON:0005103!9.24e-09!17;UBERON:0000083!9.24e-09!17;UBERON:0009201!9.24e-09!17;UBERON:0004819!9.24e-09!17;UBERON:0006553!9.24e-09!17;UBERON:0003074!9.24e-09!17;UBERON:0003060!9.24e-09!17;UBERON:0000489!1.11e-08!32;UBERON:0000464!1.27e-08!104;UBERON:0000473!2.42e-08!8;UBERON:0002553!2.93e-08!70;UBERON:0000080!3.91e-08!18;UBERON:0002120!3.91e-08!18;UBERON:0004875!3.91e-08!18;UBERON:0005721!3.91e-08!18;UBERON:0005754!3.91e-08!18;UBERON:0007297!3.91e-08!18;UBERON:0004211!6.66e-08!16;UBERON:0001285!6.66e-08!16;UBERON:0007684!6.66e-08!16;UBERON:0003220!6.66e-08!16;UBERON:0004208!6.66e-08!16;UBERON:0001851!9.48e-08!16;UBERON:0009773!2.28e-07!12;UBERON:0001231!2.28e-07!12;UBERON:0004810!2.28e-07!12;UBERON:0003135!2.37e-07!11;UBERON:0005177!4.36e-07!107;UBERON:0004876!4.47e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.82e-14;8!UBERON:0003135;5.47e-10;11!UBERON:0004211;4.17e-09;10!UBERON:0009773;4.17e-09;10!UBERON:0001231;4.17e-09;10!UBERON:0004810;4.17e-09;10!UBERON:0006853;1.24e-08;3!UBERON:0007685;1.24e-08;3!UBERON:0004134;1.24e-08;3!UBERON:0002113;8.61e-08;24!UBERON:0011143;8.61e-08;24!UBERON:0001264;1.11e-07;10!UBERON:0006955;1.52e-07;2!UBERON:0004801;1.52e-07;2!UBERON:0000922;2.27e-07;49!UBERON:0004802;5.70e-07;19!UBERON:0000115;5.70e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.25e-14,8;UBERON:0003135,6.57e-10,11;UBERON:0005177,1.91e-09,101;UBERON:0004810,5.20e-09,10;UBERON:0006853,1.48e-08,3;UBERON:0007685,1.48e-08,3;UBERON:0004134,1.48e-08,3;UBERON:0001264,1.09e-07,10;UBERON:0006955,1.52e-07,2;UBERON:0004801,1.52e-07,2;UBERON:0002323,3.69e-07,46;UBERON:0002113,4.82e-07,26;UBERON:0003918,4.82e-07,26;UBERON:0011143,4.82e-07,26;UBERON:0005095,4.82e-07,26;UBERON:0007687,4.82e-07,26;UBERON:0004802,6.20e-07,19;UBERON:0000115,6.20e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6218238517621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0,5.97671160035017,5.56625026950238,1.85910308591229,1.86589899027667,1.26160425437814,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.5403067420883,0,1.46139224653261,1.26661954671451,0,0,0.215915916102139,0,0.812839312631559,0,1.27438136522519,1.66215201785745,1.34324852833307,0,0,1.79515087581472,0.328014645699706,1.30151357865721,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.403599414382095,3.83261613921294,0,2.45792611446766,5.14455048152557,5.33917253478107,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,3.58913193817589,0,0,11.5889064012967,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,6.61059490761192,7.32801813480603,1.72371686620732,0,2.43074992906609,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.987334088507493,18.6873479705854,0,0,0,0,0,1.49590513710141,0,0,0,0,0.635746315921515,0,3.59112177950125,0,0,0,0,0,0,0,0,0,0,0,0,6.65259704369105,0,0,0,0,0,11.7252267143304,7.36186158920455,13.2930774541437,3.97190347050599,8.79012171540231,22.6997616568622,0.853828638089378,0,0.173559738335131,0,19.3271438608494,0.17472666824203,0,0,0,0,0,0.264768380074501,0,0.274083849293502,0,0,4.10657903743086,0,0,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,5.39133301347276,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,1.92555211236127,3.73896304226267,0,0,0,0,0.788057072991982,0.209818352539992,3.16801009558219,0,0,0,0,1.77987976358325,0,0,0,20.3541325656229,1.14929529049075,0,1.69968137280189,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,6.77908311187531,0,0.151649117541648,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88929745610955,0,0,0.680117776536817,0.463044948647668,0.734210113519403,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,4.6944361065422,0,0,0,0,0,2.30209868346573,0,0,0,0,0,0,0,0,0,8.0057074828547,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,7.56440581657396,0,0,0,0,0,0,0,0,0,8.83434832797752,0.695433089210318,0,0,0,0,0,0,0,0,1.14553434272025,0.31020638566432,0.955538938977433,0.671132590786754,0,0,0,0,0,0,6.78424444040106,0,0.356760272332706,0,5.38708532052603,40.1561163887352,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57254417014847,1.77377901416012,1.1218771271618,21.6446098265104,11.5787573413905,59.1669792730005,45.9976698184713,51.7170771201424,0,0,0,0,0,0.186224142887574,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,15.1552831146356,0,0,4.69281884806909,0,0.406896178315738,0,0,0 | |||
|short_description=p1@C17orf104 | |||
}} |
Revision as of 15:41, 20 January 2014
Short description: | p1@C17orf104 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C17orf104_5end |
Coexpression cluster: | C3639_testis_testicular_small_epidermoid_choriocarcinoma_argyrophil_hereditary |
Association with transcript: | 0bp_to_ENST00000409122_5end |
EntrezGene: | C17orf104 |
HGNC: | 26670 |
UniProt: | A2RUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.68e-14 | 5 |
germ line cell | 4.07e-11 | 7 |
germ cell | 4.07e-11 | 7 |
kidney tubule cell | 5.20e-09 | 10 |
nephron tubule epithelial cell | 5.20e-09 | 10 |
brush border epithelial cell | 1.48e-08 | 3 |
kidney cortex tubule cell | 1.48e-08 | 3 |
epithelial cell of proximal tubule | 1.48e-08 | 3 |
epithelial cell | 1.22e-07 | 253 |
epithelial cell of cervix | 1.52e-07 | 2 |
epithelial cell of lung | 6.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
testis | 6.25e-14 | 8 |
male reproductive organ | 6.57e-10 | 11 |
trunk region element | 1.91e-09 | 101 |
nephron tubule epithelium | 5.20e-09 | 10 |
renal cortex tubule | 1.48e-08 | 3 |
region of nephron tubule | 1.48e-08 | 3 |
proximal tubule | 1.48e-08 | 3 |
pancreas | 1.09e-07 | 10 |
uterine epithelium | 1.52e-07 | 2 |
cervix epithelium | 1.52e-07 | 2 |
body cavity | 3.69e-07 | 46 |
kidney | 4.82e-07 | 26 |
kidney mesenchyme | 4.82e-07 | 26 |
upper urinary tract | 4.82e-07 | 26 |
kidney rudiment | 4.82e-07 | 26 |
kidney field | 4.82e-07 | 26 |
respiratory tract epithelium | 6.20e-07 | 19 |
lung epithelium | 6.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.40e-13 | 106 |
cell type cancer | 7.25e-13 | 143 |
cancer | 6.85e-10 | 235 |
disease of cellular proliferation | 1.72e-09 | 239 |
lung cancer | 4.49e-09 | 15 |
respiratory system cancer | 1.94e-08 | 16 |
germ cell and embryonal cancer | 1.58e-07 | 22 |
germ cell cancer | 1.58e-07 | 22 |
bronchus cancer | 2.26e-07 | 7 |
bronchogenic carcinoma | 2.26e-07 | 7 |