FFCP PHASE1:Hg19::chr2:95713709..95713720,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr2:95713709..95713720,+ | |||
|id=chr2:95713709..95713720,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000239;9.90e-11;3!CL:1000615;9.90e-11;3!CL:0002306;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.99e-11,3;CL:1000615,8.99e-11,3;CL:0002306,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.98e-30;1!UBERON:0005425;2.37e-29;1!UBERON:0008814;2.05e-15;2!UBERON:0010056;2.05e-15;2!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.32e-27!115;UBERON:0001049!6.90e-25!57;UBERON:0005068!6.90e-25!57;UBERON:0006241!6.90e-25!57;UBERON:0007135!6.90e-25!57;UBERON:0002616!1.58e-21!59;UBERON:0002780!9.87e-20!41;UBERON:0001890!9.87e-20!41;UBERON:0006240!9.87e-20!41;UBERON:0002791!1.01e-19!33;UBERON:0003080!3.62e-19!42;UBERON:0000955!4.10e-19!69;UBERON:0006238!4.10e-19!69;UBERON:0001893!4.81e-19!34;UBERON:0002020!5.50e-19!34;UBERON:0003528!5.50e-19!34;UBERON:0005743!2.84e-17!86;UBERON:0001017!7.25e-17!82;UBERON:0002308!1.22e-16!9;UBERON:0000125!1.22e-16!9;UBERON:0000073!1.29e-16!94;UBERON:0001016!1.29e-16!94;UBERON:0000153!1.59e-16!129;UBERON:0007811!1.59e-16!129;UBERON:0009663!3.12e-16!7;UBERON:0003075!6.00e-16!86;UBERON:0007284!6.00e-16!86;UBERON:0001869!2.90e-15!32;UBERON:0002346!5.68e-15!90;UBERON:0000033!8.47e-14!123;UBERON:0003056!2.05e-13!61;UBERON:0002420!1.80e-12!9;UBERON:0007245!1.80e-12!9;UBERON:0010009!1.80e-12!9;UBERON:0010011!1.80e-12!9;UBERON:0000454!1.80e-12!9;UBERON:0000064!1.59e-10!219;UBERON:0001950!2.78e-10!20;UBERON:0004121!6.47e-10!169;UBERON:0002298!1.13e-09!8;UBERON:0000924!1.59e-09!173;UBERON:0006601!1.59e-09!173;UBERON:0002619!3.02e-09!22;UBERON:0001042!3.84e-08!10;UBERON:0009145!3.84e-08!10;UBERON:0004732!4.04e-08!13;UBERON:0000956!5.38e-08!25;UBERON:0000203!5.38e-08!25;UBERON:0000369!9.61e-08!4;UBERON:0002435!9.61e-08!4;UBERON:0000204!9.61e-08!4;UBERON:0010082!9.61e-08!4;UBERON:0005162!9.87e-08!2;UBERON:0000122!9.87e-08!2;UBERON:0001875!1.72e-07!2;UBERON:0006514!1.72e-07!2;UBERON:0006562!2.29e-07!11;UBERON:0000025!5.09e-07!194;UBERON:0003076!6.28e-07!15;UBERON:0003057!6.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.64e-38;3!UBERON:0001033;2.64e-38;3!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0000341;1.15e-15;2!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0001032;2.70e-11;24!UBERON:0004456;2.70e-11;24!UBERON:0001043;7.42e-11;3!UBERON:0006853;9.90e-11;3!UBERON:0007685;9.90e-11;3!UBERON:0004134;9.90e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.64e-38,3;UBERON:0001033,2.64e-38,3;UBERON:0010056,2.64e-38,3;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0000341,1.15e-15,2;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001042,2.81e-12,10;UBERON:0009145,2.81e-12,10;UBERON:0000020,2.70e-11,24;UBERON:0001032,2.70e-11,24;UBERON:0004456,2.70e-11,24;UBERON:0006562,2.98e-11,11;UBERON:0001043,7.42e-11,3;UBERON:0009143,7.42e-11,3;UBERON:0006853,8.99e-11,3;UBERON:0007685,8.99e-11,3;UBERON:0004134,8.99e-11,3;UBERON:0001781,2.26e-08,4;UBERON:0000153,8.61e-08,62;UBERON:0007811,8.61e-08,62;UBERON:0008814,3.04e-07,18;UBERON:0001557,6.57e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.822189523018381,0.552700035571697,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5217144286989,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0.199882311849858,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,4.4779136199206,0,0.193766729508018,0,0,0,0,1.08858373948481,1.71116650542641,0.80822463617505,0,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p@chr2:95713709..95713720,+ | |||
}} |
Revision as of 04:24, 21 January 2014
Short description: | p@chr2:95713709..95713720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:95713709..95713720, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.99e-11 | 3 |
kidney cortex tubule cell | 8.99e-11 | 3 |
epithelial cell of proximal tubule | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.64e-38 | 3 |
gustatory system | 2.64e-38 | 3 |
future tongue | 2.64e-38 | 3 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
throat | 1.15e-15 | 2 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
chordate pharynx | 2.81e-12 | 10 |
pharyngeal region of foregut | 2.81e-12 | 10 |
sense organ | 2.70e-11 | 24 |
sensory system | 2.70e-11 | 24 |
entire sense organ system | 2.70e-11 | 24 |
pharynx | 2.98e-11 | 11 |
esophagus | 7.42e-11 | 3 |
esophageal region | 7.42e-11 | 3 |
renal cortex tubule | 8.99e-11 | 3 |
region of nephron tubule | 8.99e-11 | 3 |
proximal tubule | 8.99e-11 | 3 |
layer of retina | 2.26e-08 | 4 |
anterior region of body | 8.61e-08 | 62 |
craniocervical region | 8.61e-08 | 62 |
pharyngeal arch system | 3.04e-07 | 18 |
upper respiratory tract | 6.57e-07 | 19 |