FFCP PHASE1:Hg19::chr20:49241036..49241049,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr20:49241036..49241049,- | |||
|id=chr20:49241036..49241049,- | |||
|ontology_enrichment_celltype=CL:0000066!3.82e-10!254;CL:0000239!1.02e-08!3;CL:1000615!1.02e-08!3;CL:0002306!1.02e-08!3;CL:0002553!2.23e-07!1;CL:0000167!2.67e-07!1;CL:0000164!2.67e-07!1;CL:0000502!2.67e-07!1;CL:0000172!2.67e-07!1;CL:0000173!2.67e-07!1;CL:0002351!2.67e-07!1;CL:0000313!3.82e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.57e-19;1!CL:0000167;5.14e-19;1!CL:0000164;5.14e-19;1!CL:0000502;5.14e-19;1!CL:0000172;5.14e-19;1!CL:0000173;5.14e-19;1!CL:0000239;3.25e-07;3!CL:1000615;3.25e-07;3!CL:0002306;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.25e-19,1;CL:0000167,5.62e-19,1;CL:0000164,5.62e-19,1;CL:0000502,5.62e-19,1;CL:0000172,5.62e-19,1;CL:0000173,5.62e-19,1;CL:0002351,5.62e-19,1;CL:0000066,6.20e-08,253;CL:0000239,3.16e-07,3;CL:1000615,3.16e-07,3;CL:0002306,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.57e-19;1!CL:0002351;5.14e-19;1 | |||
|ontology_enrichment_disease=DOID:5093!1.08e-24!4;DOID:1612!1.08e-24!4;DOID:305!9.48e-16!106;DOID:0050687!1.82e-13!143;DOID:4468!5.29e-13!2;DOID:162!3.04e-11!235;DOID:299!6.05e-11!25;DOID:14566!6.72e-11!239;DOID:0050686!7.29e-10!137;DOID:3111!2.10e-07!1;DOID:3603!2.10e-07!1;DOID:4430!2.67e-07!1;DOID:2152!3.82e-07!1;DOID:3151!4.57e-07!1;DOID:3149!4.57e-07!1;DOID:0050619!4.85e-07!1;DOID:1357!4.85e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.94e-72;4!DOID:1612;2.94e-72;4!DOID:3111;2.71e-19;1!DOID:3603;2.71e-19;1!DOID:4430;5.14e-19;1!DOID:299;3.07e-18;25!DOID:4468;2.07e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.22e-72,4;DOID:1612,3.22e-72,4;DOID:3111,2.71e-19,1;DOID:3603,2.71e-19,1;DOID:4430,5.62e-19,1;DOID:299,3.07e-18,25;DOID:305,2.76e-13,106;DOID:0050687,5.26e-12,143;DOID:4468,2.07e-10,2;DOID:0050686,6.23e-08,137;DOID:7,8.98e-08,39;DOID:162,5.67e-07,235;DOID:14566,8.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000310!5.94e-10!10;UBERON:0009569!9.08e-10!113;UBERON:0001443!4.72e-09!11;UBERON:0006853!1.02e-08!3;UBERON:0007685!1.02e-08!3;UBERON:0004134!1.02e-08!3;UBERON:0005172!1.57e-08!55;UBERON:0005173!1.57e-08!55;UBERON:0002110!2.45e-08!3;UBERON:0006242!2.45e-08!3;UBERON:0002417!1.59e-07!61;UBERON:0000916!1.59e-07!61;UBERON:0007029!3.60e-07!1;UBERON:0004911!3.82e-07!1;UBERON:0001764!4.85e-07!1;UBERON:0001825!4.85e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.84e-29;10!UBERON:0001443;1.17e-26;11!UBERON:0000915;5.29e-12;52!UBERON:0006853;3.25e-07;3!UBERON:0007685;3.25e-07;3!UBERON:0004134;3.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.94e-29,10;UBERON:0001443,1.20e-26,11;UBERON:0000915,2.08e-12,52;UBERON:0009569,1.46e-07,112;UBERON:0006853,3.16e-07,3;UBERON:0007685,3.16e-07,3;UBERON:0004134,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5942923571448,10.3018339451385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,7.29197731038653,3.14855999986305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,8.65133883243483,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.236417121897595,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0.438568099157414,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,4.01493034381391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0.485710993059139,0,0.596852325484105,0,0,0,9.66162198826711,0,0,65.3741041942517,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:49241036..49241049,- | |||
}} |
Revision as of 12:05, 21 January 2014
Short description: | p@chr20:49241036..49241049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:49241036..49241049, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.25e-19 | 1 |
peptide hormone secreting cell | 5.62e-19 | 1 |
enteroendocrine cell | 5.62e-19 | 1 |
type D enteroendocrine cell | 5.62e-19 | 1 |
somatostatin secreting cell | 5.62e-19 | 1 |
pancreatic D cell | 5.62e-19 | 1 |
progenitor cell of endocrine pancreas | 5.62e-19 | 1 |
epithelial cell | 6.20e-08 | 253 |
brush border epithelial cell | 3.16e-07 | 3 |
kidney cortex tubule cell | 3.16e-07 | 3 |
epithelial cell of proximal tubule | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 2.94e-29 | 10 |
chest | 1.20e-26 | 11 |
thoracic segment of trunk | 2.08e-12 | 52 |
subdivision of trunk | 1.46e-07 | 112 |
renal cortex tubule | 3.16e-07 | 3 |
region of nephron tubule | 3.16e-07 | 3 |
proximal tubule | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.22e-72 | 4 |
breast cancer | 3.22e-72 | 4 |
cystadenocarcinoma | 2.71e-19 | 1 |
mucinous cystadenocarcinoma | 2.71e-19 | 1 |
somatostatinoma | 5.62e-19 | 1 |
adenocarcinoma | 3.07e-18 | 25 |
carcinoma | 2.76e-13 | 106 |
cell type cancer | 5.26e-12 | 143 |
clear cell adenocarcinoma | 2.07e-10 | 2 |
organ system cancer | 6.23e-08 | 137 |
disease of anatomical entity | 8.98e-08 | 39 |
cancer | 5.67e-07 | 235 |
disease of cellular proliferation | 8.24e-07 | 239 |