FFCP PHASE1:Hg19::chr3:149531627..149531651,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10057 | |||
|TSSclassifier=strong | |||
|UniProt=C9JYN7 | |||
|association_with_transcript=3bp_to_ENST00000459632_5end | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_7_at_RNF13_5end | |||
|id=chr3:149531627..149531651,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.80e-61!76;CL:0002194!2.77e-61!63;CL:0000576!2.77e-61!63;CL:0000040!2.77e-61!63;CL:0000559!2.77e-61!63;CL:0002009!8.15e-59!65;CL:0000839!2.91e-53!70;CL:0002057!8.38e-53!42;CL:0000860!1.01e-52!45;CL:0000557!3.02e-52!71;CL:0000763!1.17e-37!112;CL:0000049!1.17e-37!112;CL:0000738!1.91e-35!140;CL:0002087!1.31e-34!119;CL:0002031!8.71e-29!124;CL:0000037!1.55e-26!172;CL:0000566!1.55e-26!172;CL:0002032!1.39e-25!165;CL:0000837!1.39e-25!165;CL:0000988!7.53e-24!182;CL:0000235!8.64e-09!10;CL:0000134!4.81e-08!358;CL:0002393!1.31e-07!9;CL:0002397!1.31e-07!9;CL:0002320!1.68e-07!365;CL:0000094!6.01e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.24e-94;39!CL:0000234;2.24e-94;39!CL:0000860;7.26e-94;33!CL:0002057;7.26e-94;33!CL:0000576;6.69e-71;48!CL:0000766;5.19e-53;69!CL:0000763;1.86e-26;100!CL:0000235;8.13e-22;6!CL:0000738;3.30e-18;136!CL:0002087;3.13e-17;104!CL:0002619;3.60e-12;3!CL:0000775;4.34e-12;3!CL:0000219;3.89e-09;193!CL:0000988;5.22e-09;177!CL:0000094;8.40e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.75e-134,59;CL:0000576,3.75e-134,59;CL:0000040,3.75e-134,59;CL:0000559,3.75e-134,59;CL:0002009,1.75e-129,61;CL:0000766,4.08e-129,72;CL:0000473,1.01e-127,48;CL:0000234,1.01e-127,48;CL:0000839,5.01e-119,66;CL:0000557,4.04e-117,67;CL:0000860,1.18e-106,42;CL:0002057,1.18e-106,42;CL:0000763,7.18e-83,108;CL:0000049,7.18e-83,108;CL:0002087,4.32e-67,115;CL:0000738,2.40e-66,136;CL:0002031,7.16e-64,120;CL:0002032,2.12e-54,161;CL:0000837,2.12e-54,161;CL:0000037,1.10e-51,168;CL:0000988,1.64e-48,177;CL:0000235,8.44e-22,6;CL:0000134,1.05e-18,354;CL:0002320,4.00e-18,361;CL:0000219,4.51e-16,386;CL:0000048,1.46e-13,427;CL:0000723,3.25e-13,433;CL:0000034,9.11e-13,441;CL:0002619,3.29e-12,3;CL:0000775,3.29e-12,3;CL:0002393,5.04e-09,9;CL:0002397,5.04e-09,9;CL:0000094,7.49e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.77e-76;42!CL:0000049;2.10e-26;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-49!102;UBERON:0003061!1.71e-49!102;UBERON:0002193!3.49e-46!112;UBERON:0002371!4.41e-46!80;UBERON:0001474!4.96e-43!86;UBERON:0002405!8.31e-35!115;UBERON:0004765!8.40e-34!101;UBERON:0001434!8.40e-34!101;UBERON:0003081!8.87e-16!216;UBERON:0002204!1.59e-15!167;UBERON:0002384!1.50e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-102,76;UBERON:0001474,5.01e-94,82;UBERON:0002390,1.37e-87,98;UBERON:0003061,1.37e-87,98;UBERON:0004765,8.06e-85,90;UBERON:0002405,9.01e-82,93;UBERON:0002193,1.49e-78,108;UBERON:0001434,2.32e-75,100;UBERON:0002204,5.25e-41,167;UBERON:0003081,7.53e-37,203;UBERON:0000926,7.76e-20,315;UBERON:0004120,7.76e-20,315;UBERON:0006603,7.76e-20,315;UBERON:0002384,2.49e-17,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.601633342410425,0,5.37397138175818,5.50619232232265,4.37878464978117,2.76256653681173,3.40088349319928,1.69808842831471,4.64858073811369,2.87817521615278,6.19412741790207,3.16461631554365,3.07392847834921,7.09446689665756,4.13694816883942,3.22742341791913,1.35426486594342,3.20011977222428,4.09359225086769,5.39336362668203,3.36692281607993,4.17207735198922,5.11469700639233,3.29851300186716,2.59302754908121,3.40979800426155,2.32167390902867,1.13477044938228,1.24564449799115,4.01997864410789,2.60741459210101,7.38442071997397,2.42159801053347,2.94622108790052,2.53169909952708,2.74631872205524,1.06302149982522,1.04829322754188,1.34794357375794,1.50176892841506,0.964353520182481,1.42506371870624,1.39241674039363,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0.130979075497713,0,0,9.41187441598582,8.00996791576629,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,6.55211942389866,2.22946743433092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.51128545716063,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,6.74106321552464,2.99161459204025,12.8468809165171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,2.29391162142713,0.569647187174163,1.19115887728894,0,2.59389324477087,0.540031437238115,0.79312517629427,0.854592569019785,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.550157746388935,0,0,0,0,0.670869375198532,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0.813741466409323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.751871343838829,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@RNF13 | |||
}} |
Revision as of 21:57, 21 January 2014
Short description: | p7@RNF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RNF13_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | 3bp_to_ENST00000459632_5end |
EntrezGene: | RNF13 |
HGNC: | 10057 |
UniProt: | C9JYN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.48e-102 | 76 |
bone element | 5.01e-94 | 82 |
hematopoietic system | 1.37e-87 | 98 |
blood island | 1.37e-87 | 98 |
skeletal element | 8.06e-85 | 90 |
immune system | 9.01e-82 | 93 |
hemolymphoid system | 1.49e-78 | 108 |
skeletal system | 2.32e-75 | 100 |
musculoskeletal system | 5.25e-41 | 167 |
lateral plate mesoderm | 7.53e-37 | 203 |
mesoderm | 7.76e-20 | 315 |
mesoderm-derived structure | 7.76e-20 | 315 |
presumptive mesoderm | 7.76e-20 | 315 |
connective tissue | 2.49e-17 | 371 |