FFCP PHASE1:Hg19::chr3:156869824..156869836,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57018 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=453bp_to_ENST00000471247_5end | |||
|coexpression_cluster_id=C147 | |||
|description=CAGE_peak_13_at_CCNL1_5end | |||
|id=chr3:156869824..156869836,- | |||
|ontology_enrichment_celltype=CL:0000738!1.75e-26!140;CL:0002031!8.46e-22!124;CL:0002087!1.38e-21!119;CL:0000037!3.01e-21!172;CL:0000566!3.01e-21!172;CL:0000766!3.03e-19!76;CL:0002032!5.12e-19!165;CL:0000837!5.12e-19!165;CL:0000988!9.49e-19!182;CL:0002057!3.01e-18!42;CL:0000860!4.04e-18!45;CL:0000557!5.57e-16!71;CL:0000839!1.47e-15!70;CL:0002009!4.10e-15!65;CL:0002194!2.73e-14!63;CL:0000576!2.73e-14!63;CL:0000040!2.73e-14!63;CL:0000559!2.73e-14!63;CL:0000763!2.13e-12!112;CL:0000049!2.13e-12!112;CL:0000542!8.36e-07!53;CL:0000051!8.36e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.94e-14;3!CL:0000094;1.19e-13;8!CL:0000860;9.70e-12;33!CL:0002057;9.70e-12;33!CL:0000473;2.02e-11;39!CL:0000234;2.02e-11;39!CL:0000081;7.56e-10;11!CL:0000766;6.86e-08;69!CL:0000576;1.38e-07;48!CL:0002087;2.29e-07;104!CL:0000624;2.43e-07;6!CL:0000775;6.63e-07;3!CL:0000738;7.20e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.67e-29,136;CL:0002087,4.88e-23,115;CL:0000037,1.90e-22,168;CL:0002032,4.36e-22,161;CL:0000837,4.36e-22,161;CL:0002031,6.80e-22,120;CL:0000988,6.39e-21,177;CL:0000766,5.41e-19,72;CL:0000473,1.58e-14,48;CL:0000234,1.58e-14,48;CL:0000860,1.59e-14,42;CL:0002057,1.59e-14,42;CL:0002009,2.97e-14,61;CL:0000623,3.02e-14,3;CL:0000825,3.02e-14,3;CL:0000094,1.32e-13,8;CL:0002194,8.11e-13,59;CL:0000576,8.11e-13,59;CL:0000040,8.11e-13,59;CL:0000559,8.11e-13,59;CL:0000557,1.13e-12,67;CL:0000763,1.31e-12,108;CL:0000049,1.31e-12,108;CL:0000839,3.94e-11,66;CL:0000838,8.10e-10,52;CL:0000081,8.12e-10,11;CL:0000542,1.38e-09,53;CL:0000051,1.38e-09,53;CL:0000134,8.24e-09,354;CL:0002320,1.75e-08,361;CL:0000624,1.84e-07,6;CL:0000219,2.44e-07,386;CL:0000775,6.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-17!102;UBERON:0003061!1.06e-17!102;UBERON:0002193!2.06e-16!112;UBERON:0002371!3.54e-15!80;UBERON:0001474!3.08e-14!86;UBERON:0004765!4.80e-11!101;UBERON:0001434!4.80e-11!101;UBERON:0002405!6.90e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.96e-11,76;UBERON:0002390,5.41e-10,98;UBERON:0003061,5.41e-10,98;UBERON:0001474,9.69e-10,82;UBERON:0002193,1.03e-08,108;UBERON:0004765,1.41e-08,90;UBERON:0002405,3.40e-08,93;UBERON:0002384,4.85e-08,371;UBERON:0001434,2.16e-07,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,1.18009283054671,0.767658796194425,1.39334510984468,0,0,0,0.309868802321207,0.426507697462265,0.587200878669695,3.32397245119126,2.60707781711184,0.651032612147555,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,2.01384674625505,1.5369642391746,0.945928919554341,2.06847408441971,1.29096936716765,1.35426486594342,0.752969358170419,0.818718450173537,0.224723484445085,1.83650335422542,0.641858054152187,0,1.64925650093358,1.39624560335142,0,0.870627715885752,0.56738522469114,0.622822248995575,2.51248665256743,1.0429658368404,0.868755378820466,0.605399502633369,0.368277635987565,0,0.422510572623884,0.637812899895131,0.419317291016752,0.44931452458598,0.901061357049038,1.12507910687956,0.570025487482497,0.19891667719909,0,1.75996244461323,0,0,1.28019066769952,0.400395987036012,0.574752439954483,0,0,2.84606484554724,0.587237189370939,0,0,2.24203425192614,0,3.540775862049,5.10913991573914,1.85041349099558,0,0.651844533267181,0.473447805734733,0,0.222820913770347,0.294605907474837,0.886135578334485,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0.289803085735052,1.03800594213442,0,1.04535523804977,0.113309342697566,0.766440987203842,1.03088233644789,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,3.02410114837099,2.40696176205157,0.724122019413995,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.26591592103773,1.90792499444274,0.571994910780128,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0.25326102332916,1.72131935057184,1.43418310374407,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0.717558542755448,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,2.56139988262505,2.80315847317372,1.79680250791648,0.254094624222463,0,0,0,0,1.49801404789436,8.97484377612075,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,0.426910231213777,0,0,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0.656029291399411,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0.460511024178389,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.476463550915578,1.64544909234478,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.490080431962063,0.743212700502875,0,0.569134746787313,0.318852545457645,0.399158742865633,0,0.846694330895531,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0.23874448473769,0,0.614321404198464,0,0,0.445234820091624,0,0.211125408127993,0,0.276283915531148,0,0.511343412510774,1.10776324914963,0.311039587661807,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0,0,0.236387681767936,0.689486746482929,0.583209226766509,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.230850775511391,0.455768223388005,0,0.0897576444097721,0.108647371922008,0,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,1.26598838716816,0.489698424477443,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0.485560759068186,0,0,0,0.189559738885464,0,0.311064574191741,0,0.661983911750998,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0.261177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| |||
|short_description=p13@CCNL1 | |||
}} |
Revision as of 22:15, 21 January 2014
Short description: | p13@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CCNL1_5end |
Coexpression cluster: | C147_Neutrophils_Eosinophils_CD4_CD14_CD8_Natural_Peripheral |
Association with transcript: | 453bp_to_ENST00000471247_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.96e-11 | 76 |
hematopoietic system | 5.41e-10 | 98 |
blood island | 5.41e-10 | 98 |
bone element | 9.69e-10 | 82 |
hemolymphoid system | 1.03e-08 | 108 |
skeletal element | 1.41e-08 | 90 |
immune system | 3.40e-08 | 93 |
connective tissue | 4.85e-08 | 371 |
skeletal system | 2.16e-07 | 100 |