FFCP PHASE1:Hg19::chr3:170075124..170075136,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6498 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10897 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-329bp_to_ENST00000477216_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_SKIL_5end | |||
|id=chr3:170075124..170075136,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.34e-19!45;CL:0002057!2.69e-19!42;CL:0000766!2.25e-16!76;CL:0002194!1.04e-14!63;CL:0000576!1.04e-14!63;CL:0000040!1.04e-14!63;CL:0000559!1.04e-14!63;CL:0000839!5.10e-14!70;CL:0002009!1.20e-13!65;CL:0000557!1.40e-12!71;CL:0002087!2.95e-07!119;CL:0000738!4.42e-07!140;CL:0002031!6.95e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.70e-32;33!CL:0002057;4.70e-32;33!CL:0000473;4.01e-24;39!CL:0000234;4.01e-24;39!CL:0000576;5.54e-19;48!CL:0000766;5.89e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-30,42;CL:0002057,1.43e-30,42;CL:0000473,2.39e-28,48;CL:0000234,2.39e-28,48;CL:0000766,2.46e-24,72;CL:0002194,3.37e-24,59;CL:0000576,3.37e-24,59;CL:0000040,3.37e-24,59;CL:0000559,3.37e-24,59;CL:0002009,5.71e-23,61;CL:0000839,3.11e-20,66;CL:0000557,9.74e-20,67;CL:0000763,2.57e-12,108;CL:0000049,2.57e-12,108;CL:0002087,1.15e-11,115;CL:0000738,2.80e-11,136;CL:0002031,5.05e-10,120;CL:0002032,1.87e-07,161;CL:0000837,1.87e-07,161;CL:0000037,4.94e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-10!80;UBERON:0002405!1.41e-09!115;UBERON:0001474!1.53e-08!86;UBERON:0002390!2.44e-08!102;UBERON:0003061!2.44e-08!102;UBERON:0002193!1.12e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.29e-08;10!UBERON:0000158;9.29e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.52e-17,76;UBERON:0001474,1.22e-14,82;UBERON:0004765,4.56e-13,90;UBERON:0002405,4.83e-13,93;UBERON:0002390,5.27e-13,98;UBERON:0003061,5.27e-13,98;UBERON:0002193,2.24e-11,108;UBERON:0001434,1.48e-10,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0.982935746006035,0.697801167972428,1.31064823278103,2.11013582582763,0,0,0,3.01347264011988,0.730310090387373,1.46379839637152,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0.229240217243854,0.328402357799783,0.393553906568396,0.786728553697808,0,1.70297735647684,0,0,0,0.542270404062111,0.142169232487422,0.587200878669695,1.10799081706375,2.20598892217156,2.82114131930607,1.56740831967947,0.32389366601898,1.80302897343931,4.9435401185052,3.02300754951048,4.60909716256851,7.43772918098191,4.93401465626191,9.60089749774821,4.89077066947656,4.35473201099471,5.67557351732605,6.20542225325913,5.80936215225443,4.06279459783025,6.40023954444856,6.27684145133045,4.71919317334678,9.79468455586888,6.09765151444578,6.39337125799041,5.93732340336089,6.18337338627059,5.54092175692502,10.447532590629,8.5107783703671,17.4390229718761,3.26623264833766,7.82224377630302,4.34377689410233,4.84319602106695,9.57521853567668,9.81033401066742,0,0.637812899895131,0.838634582033504,0.44931452458598,0.300353785683013,0.48217676009124,0.570025487482497,0.99458338599545,0.365328307529268,0,1.09227722252426,0,1.70692089026603,0.800791974072025,4.02326707968138,1.32208974556972,4.77026877267682,0,0,1.52909291250092,0,0,0,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0.289803085735052,0.741432815810302,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,2.43806866313962,0,0.511450247374121,0,0.50133791063589,0.144846518960824,1.5905718941022,0.486634870302636,0.661743720148475,0.886917589850256,1.31752178539689,0.327447688744282,0,0,0,0.348259474598534,0,0,0,0.74291500265913,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.892997282840798,0.44905874525234,0.337834441449967,0,2.84779697870439,1.09921046358244,17.1314542666882,38.7780264148325,0,1.49091585508596,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.587172493218824,0.323745888736263,0.280901613404497,0.408308342509787,0,0.413303124703062,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0.30648779579902,0.600952235626387,0.794025282120147,0.179389635688862,0.427114777637135,0.635795703478686,0,0.515262646192195,0,0.930584281657949,0.337552664482532,0.292311015483596,0,0.736399189138395,0.484938170456436,0,0.201504196455281,0.169560592310488,0.193260853163297,0.818238361772504,1.14721838155602,4.02513230227665,2.25300606146525,2.44007280025989,0.932949495138334,2.27088765788066,0.36497735907583,0,1.92972281457866,1.38134921352481,0.464367928031979,0,0.118306800039844,0.505754070234305,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0,0.588664395376038,0.769494313892781,0.738155454624648,0,0.8231480226628,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.439001141634502,0,0.301586917234893,1.01847289674383,0,0,0,0.463721619900307,1.05667824812239,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0.738651018262192,0.702012795417713,1.63494278517601,0,1.51183915378974,0.283550194484773,0.268675568108545,0,1.53353071666084,0,0.44024217006613,0.621984346622316,0.576479813667846,0.75745460055828,0.126995788584338,1.52795370223311,0,0,0.719792448923265,0.300343057843917,1.14330573052231,0,0.43596006883328,0.22001485746285,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0.479249710983165,0,0,0.723906533337896,0.821905290201534,0.358121926479791,0.336255431980582,0.197030760201927,0.215627574859517,0.385029108839245,0.254094624222463,1.30139853857622,0,0.335032530668698,0,0.749007023947182,2.99161459204025,3.72973962092432,0.49076596687656,0,0.271265023699736,0.207970861530807,0.713715955188647,0.473107245101804,1.05427273493442,0.601892199455438,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0.195801157462741,0,0.206768026122887,0.431428401637234,1.28073069364133,0.909382714338778,0,0.907170879989041,0.248107807818777,0.306923946576125,0.561320188866147,0.512556597022804,1.02341449813341,0.482561763430822,0,1.07946785661859,0.355123450626254,0.164254312027618,0,0.232420756919918,0.241718899183244,0.40101294060657,1.47329582297434,0.114814448164607,0.364182336013434,0.393373244878272,0,0.847168708148562,0,0,0.633309773357254,0,0.170093705276516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| |||
|short_description=p4@SKIL | |||
}} |
Revision as of 22:32, 21 January 2014
Short description: | p4@SKIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SKIL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -329bp_to_ENST00000477216_5end |
EntrezGene: | SKIL |
HGNC: | 10897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.43e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-30 | 42 |
defensive cell | 2.39e-28 | 48 |
phagocyte | 2.39e-28 | 48 |
myeloid leukocyte | 2.46e-24 | 72 |
monopoietic cell | 3.37e-24 | 59 |
monocyte | 3.37e-24 | 59 |
monoblast | 3.37e-24 | 59 |
promonocyte | 3.37e-24 | 59 |
macrophage dendritic cell progenitor | 5.71e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.11e-20 | 66 |
granulocyte monocyte progenitor cell | 9.74e-20 | 67 |
myeloid cell | 2.57e-12 | 108 |
common myeloid progenitor | 2.57e-12 | 108 |
nongranular leukocyte | 1.15e-11 | 115 |
leukocyte | 2.80e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 5.05e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-07 | 161 |
hematopoietic stem cell | 4.94e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.52e-17 | 76 |
bone element | 1.22e-14 | 82 |
skeletal element | 4.56e-13 | 90 |
immune system | 4.83e-13 | 93 |
hematopoietic system | 5.27e-13 | 98 |
blood island | 5.27e-13 | 98 |
hemolymphoid system | 2.24e-11 | 108 |
skeletal system | 1.48e-10 | 100 |