FFCP PHASE1:Hg19::chr5:169694054..169694090,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=173bp_to_uc011des.1_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_5_at_LCP2_5end | |||
|id=chr5:169694054..169694090,- | |||
|ontology_enrichment_celltype=CL:0000037!2.45e-67!172;CL:0000566!2.45e-67!172;CL:0002032!6.01e-65!165;CL:0000837!6.01e-65!165;CL:0000988!2.20e-63!182;CL:0000738!1.25e-60!140;CL:0000763!2.28e-54!112;CL:0000049!2.28e-54!112;CL:0002031!1.20e-53!124;CL:0002087!2.08e-52!119;CL:0000766!5.11e-52!76;CL:0000557!2.48e-46!71;CL:0000839!5.76e-46!70;CL:0002194!2.21e-43!63;CL:0000576!2.21e-43!63;CL:0000040!2.21e-43!63;CL:0000559!2.21e-43!63;CL:0002009!1.08e-42!65;CL:0002057!1.88e-41!42;CL:0000860!2.08e-37!45;CL:0000084!4.55e-12!25;CL:0000827!4.55e-12!25;CL:0000134!1.72e-11!358;CL:0002320!1.30e-10!365;CL:0000838!1.47e-10!52;CL:0000542!3.61e-10!53;CL:0000051!3.61e-10!53;CL:0000791!6.08e-10!18;CL:0000789!6.08e-10!18;CL:0002420!6.08e-10!18;CL:0002419!6.08e-10!18;CL:0000790!6.08e-10!18;CL:0002393!3.56e-08!9;CL:0002397!3.56e-08!9;CL:0000219!1.17e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-55;33!CL:0002057;3.23e-55;33!CL:0000473;5.94e-51;39!CL:0000234;5.94e-51;39!CL:0000576;1.02e-39;48!CL:0000766;1.09e-35;69!CL:0000763;4.71e-21;100!CL:0000738;5.26e-14;136!CL:0002087;2.74e-12;104!CL:0000097;4.21e-10;5!CL:0000988;1.58e-08;177!CL:0000775;4.40e-08;3!CL:0000235;5.89e-08;6!CL:0002393;6.96e-08;6!CL:0002397;6.96e-08;6!CL:0000094;2.97e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.30e-78,72;CL:0000473,4.62e-71,48;CL:0000234,4.62e-71,48;CL:0000839,5.86e-69,66;CL:0000557,1.03e-67,67;CL:0000860,1.48e-64,42;CL:0002057,1.48e-64,42;CL:0002194,1.25e-62,59;CL:0000576,1.25e-62,59;CL:0000040,1.25e-62,59;CL:0000559,1.25e-62,59;CL:0002009,3.78e-60,61;CL:0000763,8.66e-59,108;CL:0000049,8.66e-59,108;CL:0000738,1.10e-51,136;CL:0002032,1.06e-48,161;CL:0000837,1.06e-48,161;CL:0002031,7.94e-48,120;CL:0000037,1.62e-47,168;CL:0000988,4.07e-44,177;CL:0002087,8.44e-43,115;CL:0000134,1.14e-12,354;CL:0002320,4.45e-12,361;CL:0000097,2.19e-10,5;CL:0002028,2.19e-10,5;CL:0000219,5.10e-10,386;CL:0000775,4.33e-08,3;CL:0000235,8.26e-08,6;CL:0000048,1.46e-07,427;CL:0000094,3.01e-07,8;CL:0000723,3.14e-07,433;CL:0002393,4.47e-07,9;CL:0002397,4.47e-07,9;CL:0000034,8.36e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-46;42!CL:0000049;1.48e-17;108 | |||
|ontology_enrichment_disease=DOID:1240!2.43e-10!39;DOID:8692!1.65e-09!31;DOID:2531!1.67e-09!51;DOID:0060083!1.67e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.77e-53!102;UBERON:0003061!7.77e-53!102;UBERON:0002193!3.90e-49!112;UBERON:0002371!1.14e-39!80;UBERON:0001474!4.09e-35!86;UBERON:0002405!3.05e-31!115;UBERON:0004765!4.53e-27!101;UBERON:0001434!4.53e-27!101;UBERON:0007023!4.26e-13!115;UBERON:0003081!4.81e-13!216;UBERON:0002384!7.09e-10!375;UBERON:0000178!7.52e-10!15;UBERON:0000179!7.52e-10!15;UBERON:0000463!7.52e-10!15;UBERON:0002204!2.67e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.87e-63,98;UBERON:0003061,1.87e-63,98;UBERON:0002193,3.05e-58,108;UBERON:0002371,5.49e-58,76;UBERON:0002405,2.29e-53,93;UBERON:0001474,1.11e-52,82;UBERON:0004765,1.06e-46,90;UBERON:0001434,1.43e-40,100;UBERON:0003081,5.88e-22,203;UBERON:0002204,1.40e-18,167;UBERON:0002384,7.23e-12,371;UBERON:0000926,1.09e-08,315;UBERON:0004120,1.09e-08,315;UBERON:0006603,1.09e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0.77408061658038,0,0,0,0,0,0,1.10799081706375,3.40925560699241,1.73608696572681,1.79132379391939,0.647787332037959,2.83333124397605,4.50734540216651,6.04601509902095,3.15359279544161,9.76201955003875,7.40102198439286,5.57471467611186,22.1523142088056,15.8819638048042,12.7700404139836,6.89491361473237,5.80936215225443,4.06279459783025,7.71793592124679,8.18718450173537,5.8428105955722,14.3859429414324,10.9115869205872,14.7047538933779,15.5030111087757,23.9356389145958,20.0325632750366,20.6048559426295,7.94339314567596,18.0618452208717,19.0948985595125,18.7733850631273,11.9453864587814,12.1079900526674,12.1531619875896,8.86094684834476,1.26753171787165,1.70083439972035,0.838634582033504,0.898629049171961,0.901061357049038,2.57160938715328,0.855038231223746,1.19350006319454,0.91332076882317,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.590129310341499,0.786021525498329,1.64481199199607,2.50779743086017,0.32592226663359,0.473447805734733,1.94826728407911,2.78526142212934,1.76763544484902,1.10766947291811,2.16643091012012,2.5618263945135,1.69077151827842,1.47994114143309,0.829050053357545,2.89803085735052,1.77943875794473,0.267540828089713,2.09071047609954,1.13309342697566,0.383220493601921,1.03088233644789,2.27717722817553,1.91139248594458,0,0.950452044448374,1.6563263098555,1.02389288923535,0,0.473554504088034,0.821127996921047,0.80642697289893,1.60464117470104,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.696518949197069,1.06366368415092,0,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,1.17002132569619,0.891786973732369,0,0,0,0,0,0,1.97065295158377,5.72314821085969,2.28060927094849,2.88239906833923,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,6.32501818449095,0,0,0,0,0,0,0.784596007954691,1.37921532141349,1.50939302401662,0.898401253958239,0,0,0,0,0,17.9761685747324,23.932916736322,12.8468809165171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.94142780736755,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,2.29391162142713,3.41788312304498,0.476463550915578,0.411362273086194,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0.478278818186467,2.19537308576098,0,0.635020748171649,0,0.842391534340376,0.228234679033192,0.626719583092093,2.50634477090067,0.50787533340481,0.642352300414798,0.201799707191048,0.425846237690326,1.37402137902306,0.307240764308458,0.671028323677248,0.333698283423817,0.586164286206121,0,0,1.35227839237992,0.66614393599564,1.4098700508785,0,1.46508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0,0,0.511572370226872,0.0986434056369336,9.57932369387759,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.156980256395025,0.332423363800313,0.225595660617181,0,0,0,0.476809736941136,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0.617819694732514,0.208843899010911,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.338693328263138,0,0.272406812223151,0,0,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0,0.58620893471233,0,0.387848869084652,0.26446520348538,0,0,1.17466153824464,0,1.24271716604159,2.48083010905975,0.395223263795889,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.250381861413,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0.999936979274649,0.320075189082423,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0.3457019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| |||
|short_description=p5@LCP2 | |||
}} |
Revision as of 08:57, 22 January 2014
Short description: | p5@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCP2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 173bp_to_uc011des.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.87e-63 | 98 |
blood island | 1.87e-63 | 98 |
hemolymphoid system | 3.05e-58 | 108 |
bone marrow | 5.49e-58 | 76 |
immune system | 2.29e-53 | 93 |
bone element | 1.11e-52 | 82 |
skeletal element | 1.06e-46 | 90 |
skeletal system | 1.43e-40 | 100 |
lateral plate mesoderm | 5.88e-22 | 203 |
musculoskeletal system | 1.40e-18 | 167 |
connective tissue | 7.23e-12 | 371 |
mesoderm | 1.09e-08 | 315 |
mesoderm-derived structure | 1.09e-08 | 315 |
presumptive mesoderm | 1.09e-08 | 315 |