FFCP PHASE1:Hg19::chr5:169724750..169724836,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |||
|TSSclassifier=strong | |||
|UniProt=Q13094 | |||
|association_with_transcript=0bp_to_ENST00000519149,ENST00000522823,NM_005565,uc003man.1,uc011det.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_LCP2_5end | |||
|id=chr5:169724750..169724836,- | |||
|ontology_enrichment_celltype=CL:0000037!9.32e-82!172;CL:0000566!9.32e-82!172;CL:0000988!4.23e-79!182;CL:0002032!1.13e-77!165;CL:0000837!1.13e-77!165;CL:0000738!1.38e-66!140;CL:0000763!1.87e-56!112;CL:0000049!1.87e-56!112;CL:0002031!2.05e-56!124;CL:0002087!1.95e-53!119;CL:0000766!3.48e-43!76;CL:0000557!7.81e-38!71;CL:0000839!6.08e-37!70;CL:0002009!1.03e-33!65;CL:0002194!4.80e-33!63;CL:0000576!4.80e-33!63;CL:0000040!4.80e-33!63;CL:0000559!4.80e-33!63;CL:0002057!6.21e-32!42;CL:0000860!6.24e-29!45;CL:0000838!1.54e-17!52;CL:0000542!1.70e-17!53;CL:0000051!1.70e-17!53;CL:0000084!2.14e-13!25;CL:0000827!2.14e-13!25;CL:0000134!3.86e-12!358;CL:0002320!2.13e-11!365;CL:0000791!3.78e-11!18;CL:0000789!3.78e-11!18;CL:0002420!3.78e-11!18;CL:0002419!3.78e-11!18;CL:0000790!3.78e-11!18;CL:0000219!6.93e-08!390;CL:0000094!1.24e-07!8;CL:0000625!1.29e-07!11;CL:0002393!2.43e-07!9;CL:0002397!2.43e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-24;33!CL:0002057;1.11e-24;33!CL:0000576;3.95e-23;48!CL:0000473;4.96e-23;39!CL:0000234;4.96e-23;39!CL:0000766;6.23e-21;69!CL:0000763;1.97e-18;100!CL:0002087;1.63e-16;104!CL:0000738;3.07e-15;136!CL:0000988;1.61e-14;177!CL:0000084;6.36e-14;25!CL:0000791;1.39e-11;18!CL:0000789;1.39e-11;18!CL:0002419;1.39e-11;18!CL:0000542;6.58e-10;53!CL:0000094;6.57e-08;8!CL:0000625;6.87e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.53e-88,168;CL:0000988,2.06e-85,177;CL:0002032,8.51e-84,161;CL:0000837,8.51e-84,161;CL:0000738,2.78e-72,136;CL:0000763,1.35e-62,108;CL:0000049,1.35e-62,108;CL:0002031,1.39e-61,120;CL:0002087,1.89e-58,115;CL:0000766,3.62e-49,72;CL:0000557,2.22e-43,67;CL:0000839,2.02e-42,66;CL:0002009,5.30e-39,61;CL:0002194,2.40e-38,59;CL:0000576,2.40e-38,59;CL:0000040,2.40e-38,59;CL:0000559,2.40e-38,59;CL:0000473,4.13e-36,48;CL:0000234,4.13e-36,48;CL:0000860,2.58e-33,42;CL:0002057,2.58e-33,42;CL:0000838,9.55e-18,52;CL:0000542,1.05e-17,53;CL:0000051,1.05e-17,53;CL:0000084,6.22e-14,25;CL:0000827,6.22e-14,25;CL:0000134,3.81e-13,354;CL:0002320,2.01e-12,361;CL:0000791,1.39e-11,18;CL:0000789,1.39e-11,18;CL:0002420,1.39e-11,18;CL:0002419,1.39e-11,18;CL:0000790,1.39e-11,18;CL:0000094,6.55e-08,8;CL:0000625,6.82e-08,11;CL:0000219,7.53e-08,386;CL:0002393,1.32e-07,9;CL:0002397,1.32e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-24;42!CL:0000049;3.89e-17;108!CL:0000790;1.39e-11;18!CL:0000051;6.58e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!6.75e-15!39;DOID:2531!5.08e-13!51;DOID:0060083!5.08e-13!51;DOID:8692!1.03e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.77e-13;31!DOID:1240;5.11e-12;39!DOID:2531;1.98e-08;51!DOID:0060083;1.98e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.68e-15,39;DOID:8692,3.21e-13,31;DOID:2531,3.39e-13,51;DOID:0060083,3.39e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.03e-44!102;UBERON:0003061!9.03e-44!102;UBERON:0002193!1.68e-40!112;UBERON:0002371!3.67e-32!80;UBERON:0001474!9.89e-29!86;UBERON:0002405!1.24e-25!115;UBERON:0007023!3.31e-24!115;UBERON:0004765!1.19e-20!101;UBERON:0001434!1.19e-20!101;UBERON:0002384!1.43e-10!375;UBERON:0003081!3.91e-10!216;UBERON:0000178!1.11e-09!15;UBERON:0000179!1.11e-09!15;UBERON:0000463!1.11e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.57e-10;15!UBERON:0000179;4.57e-10;15!UBERON:0000463;4.57e-10;15!UBERON:0007023;4.05e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.54e-49,98;UBERON:0003061,2.54e-49,98;UBERON:0002193,1.09e-45,108;UBERON:0002371,5.41e-37,76;UBERON:0002405,2.93e-36,93;UBERON:0001474,1.61e-32,82;UBERON:0004765,9.84e-27,90;UBERON:0007023,4.87e-25,114;UBERON:0001434,4.61e-22,100;UBERON:0003081,5.43e-13,203;UBERON:0002384,2.08e-11,371;UBERON:0000178,4.78e-10,15;UBERON:0000179,4.78e-10,15;UBERON:0000463,4.78e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0,0,0,35.6086470785453,27.4215968762819,29.3591214300024,243.099123092623,197.288310621967,192.591257405199,0,0,0,0,1.56386155736164,32.8832492055029,391.120758423505,369.803961134941,253.685707866831,160.099564081546,126.318529747402,131.878690628704,204.866118440407,293.231732302516,208.379708560334,432.782866718385,441.183143847419,436.066570220306,724.984828651819,600.696856810741,630.698107112857,570.209355938367,525.424532437234,472.638438214253,424.109990989488,384.797671581563,344.501101654315,631.757153853543,679.40675032009,584.354132980324,492.797842478954,599.787218468247,459.896505824777,702.306357481173,466.958039920808,536.872778634186,634.15163110802,519.918469664941,617.902263186057,521.854371269964,705.619950552174,600.96207375024,165.835399754874,194.532934468015,149.486614247472,133.33408517089,120.441868058888,194.31723431677,153.906881620274,177.03584270719,168.051021463463,7.03984977845291,14.7457425040775,8.89509253863555,13.2286368995617,6.00593980554019,13.2193061189531,7.93253847341835,8.58648379081828,12.5226853204079,14.0936925449025,9.93910393125595,48.9033915742396,99.7705242107134,38.4540763771613,149.106005746285,103.754841365779,111.847215455733,129.235160936994,123.198616787497,113.627473376336,95.4650969198765,164.553244819401,94.2738903919479,105.450133821804,151.920967572174,109.518078365452,114.842403895372,121.519611502117,107.223806900909,159.101894068544,144.727685646171,141.796638887548,140.077601898669,128.152866590947,129.528526837449,104.119115981237,164.209780120657,154.185660532863,154.957862017828,135.914642356117,134.162431098296,148.464468939125,147.418257331768,155.562654592919,137.949503482736,142.535967459886,89.8599057832585,102.680502352904,0,0,0,0,0,0,0,0,0,0,1.31752178539689,17.4857065789446,0,0,31.805644578159,31.6916121884666,44.9397906553764,31.2422717839998,16.0158575018436,10.0293525358983,0,0,0,0,0,0,0.208994966536811,2.06733407335463,2.49036383880697,4.35136796594071,0.805658634218294,0,0,0,2.43042584364528,0.0892997282840798,0,0.112611480483322,0,0,0,1358.65610376581,1477.44280640512,0,0,0,0,0,5.67469411517371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.674156540800822,0,0,10.3341763647451,1.40241773803446,0,0,0,4.91413608338813,7.08947888017685,40.1731420467332,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,114.49090783064,68.7972539509359,71.4915890608783,0,0,0,0,0,0,442.904250868453,390.758950150697,235.524739254317,277.863270187902,255.514685254993,0,0.381988425558278,0,0,0,0.300343057843917,0,0.336393253036082,0,0.22001485746285,0,0,0.845302752556,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0,85.1366464488333,79.8588775377081,67.4668606345701,0,0,0,0,0,0,88.0989231789124,154.078054477907,104.148118657147,112.1718137085,1.52456774533478,1.30139853857622,0,2.17771144934653,0,1012.65749637659,966.291513229001,1093.22812444426,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95801157462741,2.40200396667599,199.324377182463,173.002789056531,162.546070534646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.510281115829547,1.51141141271498,0,0,0,0,0,0,8.11261543589958,8.36593443279682,0,0,0,34.7248209252824,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,1.27839941124151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40805847909725,0,0,0,0,0,1.26664581178598,0,0,0,0,2.68120910214315,0,34.3624872835244,0,0,0,0,218.202471969833,188.100752957024,202.794398634002,197.255910079049,189.638007892736,215.941612627175,180.37050003753,203.833170307627,0,0.962479855263359,0,2.22963810150862,1.58696134274089,29.8795742063339,40.8131258185785,107.573281202288,21.8316121950898,33.6560996530974,18.5034505956497,53.3514638415572,25.1058146936511,76.4597891372353,35.0888267926094,51.2954086738858,35.811140748125,32.6915525649497,47.6947786213165,69.3880796406645,81.4188025417414,81.8654554886242,90.7659330912782,64.6734595780753,59.0221088657914,71.3906913896732,91.9549306818343,82.2687760954615,90.2316832562237,0,46.1500764706466,0,47.2519949336508,0,0.23874448473769,4.45447021248958,0.614321404198464,5.96488588659779,11.3942227292515,0,7.91058596288446,0,9.96239941255349,41.4425873296722,0,0,64.1271836452172,0,0,0,37.3447830265616,13.6127899778968,91.0035750918371,0,5.81599647657131,8.44189693272846,1.99613798001194,0,0,5.79999660347835,0,0,0,0,0,0,8.85741385813839,9.40652221278182,7.62908681585416,3.31737779793674,1.47773809476774,5.92340572315726,0,0,9.77268282998223,0,0,0,0,3.50901275705111,0.732780747214898,12.2597998484286,64.381777863314,33.7507551249303,47.2041176596444,10.8285917096247,8.62675150998054,14.2648348929466,4.55408958538044,103.785586074187,0,0,0,0,9.95261931078505,20.4336974002713,6.72133159426988,10.0817183751411,19.5231023535475,21.7197654971347,15.434859452575,6.42062117839031,3.04543779442941,0.364909578431332,0,0,2.367506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| |||
|short_description=p1@LCP2 | |||
}} |
Revision as of 08:58, 22 January 2014
Short description: | p1@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCP2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000519149, ENST00000522823, NM_005565, uc003man.1, uc011det.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | Q13094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.54e-49 | 98 |
blood island | 2.54e-49 | 98 |
hemolymphoid system | 1.09e-45 | 108 |
bone marrow | 5.41e-37 | 76 |
immune system | 2.93e-36 | 93 |
bone element | 1.61e-32 | 82 |
skeletal element | 9.84e-27 | 90 |
adult organism | 4.87e-25 | 114 |
skeletal system | 4.61e-22 | 100 |
lateral plate mesoderm | 5.43e-13 | 203 |
connective tissue | 2.08e-11 | 371 |
blood | 4.78e-10 | 15 |
haemolymphatic fluid | 4.78e-10 | 15 |
organism substance | 4.78e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.68e-15 | 39 |
myeloid leukemia | 3.21e-13 | 31 |
hematologic cancer | 3.39e-13 | 51 |
immune system cancer | 3.39e-13 | 51 |