FFCP PHASE1:Hg19::chr6:134639140..134639171,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6446 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |||
|TSSclassifier=strong | |||
|UniProt=O00141,Q7Z3I4 | |||
|association_with_transcript=24bp_to_ENST00000367858,NM_001143676,uc003qeo.3,uc003qep.2_5end | |||
|coexpression_cluster_id=C701 | |||
|description=CAGE_peak_7_at_SGK1_5end | |||
|id=chr6:134639140..134639171,- | |||
|ontology_enrichment_celltype=CL:0002274!2.25e-07!5;CL:0000457!2.25e-07!5;CL:0002191!2.25e-07!5;CL:0000097!2.25e-07!5;CL:0000831!2.25e-07!5;CL:0002028!2.25e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.11e-14;5!CL:0002567;1.61e-08;3!CL:0000163;9.23e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.20e-14,5;CL:0002028,2.20e-14,5;CL:0002567,1.63e-08,3;CL:0000163,9.43e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.12e-16;82!UBERON:0006241;3.02e-08;3!UBERON:0003057;3.02e-08;3!UBERON:0006215;7.24e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.33e-43!57;UBERON:0005068!2.33e-43!57;UBERON:0006241!2.33e-43!57;UBERON:0007135!2.33e-43!57;UBERON:0001017!7.51e-40!82;UBERON:0005743!1.48e-38!86;UBERON:0002616!2.33e-38!59;UBERON:0007023!8.72e-38!115;UBERON:0000955!2.76e-37!69;UBERON:0006238!2.76e-37!69;UBERON:0000073!6.39e-37!94;UBERON:0001016!6.39e-37!94;UBERON:0002780!9.31e-34!41;UBERON:0001890!9.31e-34!41;UBERON:0006240!9.31e-34!41;UBERON:0003080!1.34e-32!42;UBERON:0002020!3.73e-31!34;UBERON:0003528!3.73e-31!34;UBERON:0001893!4.54e-31!34;UBERON:0003075!2.52e-30!86;UBERON:0007284!2.52e-30!86;UBERON:0002346!3.62e-30!90;UBERON:0002791!4.46e-30!33;UBERON:0001869!9.99e-29!32;UBERON:0003056!6.84e-23!61;UBERON:0002619!6.82e-22!22;UBERON:0000956!1.82e-21!25;UBERON:0000203!1.82e-21!25;UBERON:0000153!2.28e-21!129;UBERON:0007811!2.28e-21!129;UBERON:0000033!3.31e-20!123;UBERON:0001950!1.02e-19!20;UBERON:0000924!4.01e-19!173;UBERON:0006601!4.01e-19!173;UBERON:0004121!7.56e-19!169;UBERON:0003076!1.30e-11!15;UBERON:0003057!1.30e-11!15;UBERON:0002308!3.03e-11!9;UBERON:0000125!3.03e-11!9;UBERON:0002420!4.86e-11!9;UBERON:0007245!4.86e-11!9;UBERON:0010009!4.86e-11!9;UBERON:0010011!4.86e-11!9;UBERON:0000454!4.86e-11!9;UBERON:0004732!8.61e-10!13;UBERON:0009663!5.02e-09!7;UBERON:0004733!1.02e-08!12;UBERON:0002028!1.02e-08!12;UBERON:0007277!1.02e-08!12;UBERON:0000922!2.00e-08!612;UBERON:0000062!3.06e-08!511;UBERON:0002298!7.04e-08!8;UBERON:0002050!1.48e-07!605;UBERON:0005423!1.48e-07!605;UBERON:0000200!1.66e-07!6;UBERON:0001871!2.05e-07!7;UBERON:0000923!3.11e-07!604;UBERON:0005291!3.11e-07!604;UBERON:0006598!3.11e-07!604;UBERON:0002532!3.11e-07!604;UBERON:0000468!4.79e-07!659;UBERON:0000349!7.88e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.74e-49;34!UBERON:0003528;2.46e-48;34!UBERON:0002020;2.46e-48;34!UBERON:0002791;1.99e-47;32!UBERON:0001869;4.68e-47;32!UBERON:0002780;4.99e-47;41!UBERON:0001890;4.99e-47;41!UBERON:0000073;3.94e-45;53!UBERON:0002616;3.94e-45;53!UBERON:0002619;2.40e-43;22!UBERON:0001950;1.48e-38;20!UBERON:0000956;1.24e-37;25!UBERON:0000203;1.24e-37;25!UBERON:0001017;4.12e-33;75!UBERON:0000955;5.93e-31;68!UBERON:0001016;3.39e-27;83!UBERON:0000125;6.13e-23;9!UBERON:0002308;6.13e-23;9!UBERON:0002420;1.81e-22;9!UBERON:0007245;1.81e-22;9!UBERON:0010009;1.81e-22;9!UBERON:0010011;1.81e-22;9!UBERON:0000454;1.81e-22;9!UBERON:0004732;1.88e-18;13!UBERON:0009663;4.91e-18;7!UBERON:0004733;3.95e-16;12!UBERON:0002028;3.95e-16;12!UBERON:0002298;5.27e-16;6!UBERON:0007023;5.73e-14;114!UBERON:0000349;3.34e-13;5!UBERON:0001871;7.93e-13;6!UBERON:0002021;1.61e-12;5!UBERON:0001872;4.11e-12;5!UBERON:0000369;7.79e-11;4!UBERON:0002435;7.79e-11;4!UBERON:0000204;7.79e-11;4!UBERON:0000200;9.32e-11;6!UBERON:0002784;1.37e-10;4!UBERON:0011216;3.80e-10;132!UBERON:0002680;8.40e-10;9!UBERON:0001895;8.40e-10;9!UBERON:0001894;4.60e-09;7!UBERON:0000988;6.12e-09;3!UBERON:0001896;9.28e-09;3!UBERON:0005290;9.28e-09;3!UBERON:0005383;1.47e-08;3!UBERON:0005382;1.47e-08;3!UBERON:0002240;3.02e-08;3!UBERON:0005174;3.02e-08;3!UBERON:0001137;3.02e-08;3!UBERON:0010314;3.55e-07;132!UBERON:0005162;8.55e-07;2!UBERON:0000122;8.55e-07;2!UBERON:0001897;8.91e-07;2!UBERON:0010225;8.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.02e-88,56;UBERON:0005068,2.02e-88,56;UBERON:0006241,2.02e-88,56;UBERON:0007135,2.02e-88,56;UBERON:0000073,1.69e-81,53;UBERON:0002616,1.69e-81,53;UBERON:0001017,1.72e-73,81;UBERON:0000955,1.77e-72,68;UBERON:0006238,1.77e-72,68;UBERON:0001016,6.52e-68,89;UBERON:0002780,7.02e-66,41;UBERON:0001890,7.02e-66,41;UBERON:0003080,7.02e-66,41;UBERON:0006240,7.02e-66,41;UBERON:0003075,2.68e-62,82;UBERON:0007284,2.68e-62,82;UBERON:0002346,8.51e-59,86;UBERON:0003528,1.62e-58,34;UBERON:0002020,1.62e-58,34;UBERON:0001893,2.44e-58,34;UBERON:0002791,1.27e-53,32;UBERON:0001869,2.95e-53,32;UBERON:0010371,1.76e-48,104;UBERON:0003056,6.19e-47,61;UBERON:0007023,1.12e-43,114;UBERON:0002619,3.09e-43,22;UBERON:0001950,1.89e-38,20;UBERON:0000956,1.55e-37,25;UBERON:0000203,1.55e-37,25;UBERON:0010314,1.53e-35,132;UBERON:0004121,3.42e-33,171;UBERON:0000924,3.42e-33,171;UBERON:0006601,3.42e-33,171;UBERON:0000125,6.48e-23,9;UBERON:0002308,6.48e-23,9;UBERON:0002420,1.84e-22,9;UBERON:0007245,1.84e-22,9;UBERON:0010009,1.84e-22,9;UBERON:0010011,1.84e-22,9;UBERON:0000454,1.84e-22,9;UBERON:0003076,1.93e-22,15;UBERON:0003057,1.93e-22,15;UBERON:0011216,4.56e-21,223;UBERON:0004732,1.85e-18,13;UBERON:0009663,5.11e-18,7;UBERON:0000025,6.08e-17,192;UBERON:0004733,3.89e-16,12;UBERON:0002028,3.89e-16,12;UBERON:0007277,3.89e-16,12;UBERON:0002298,4.52e-16,6;UBERON:0000349,3.43e-13,5;UBERON:0001871,8.93e-13,6;UBERON:0002021,1.54e-12,5;UBERON:0001872,4.48e-12,5;UBERON:0004111,6.68e-12,240;UBERON:0000369,8.31e-11,4;UBERON:0002435,8.31e-11,4;UBERON:0000204,8.31e-11,4;UBERON:0010082,8.31e-11,4;UBERON:0000200,9.33e-11,6;UBERON:0002784,1.72e-10,4;UBERON:0002680,9.11e-10,9;UBERON:0001895,9.11e-10,9;UBERON:0010092,9.11e-10,9;UBERON:0000483,3.59e-09,306;UBERON:0001894,5.43e-09,7;UBERON:0006222,5.43e-09,7;UBERON:0000119,5.79e-09,309;UBERON:0000988,6.13e-09,3;UBERON:0001896,7.95e-09,3;UBERON:0005290,7.95e-09,3;UBERON:0010096,7.95e-09,3;UBERON:0005383,1.51e-08,3;UBERON:0005382,1.51e-08,3;UBERON:0002240,2.51e-08,3;UBERON:0005174,2.51e-08,3;UBERON:0001137,2.51e-08,3;UBERON:0005162,8.44e-07,2;UBERON:0000122,8.44e-07,2;UBERON:0001897,8.68e-07,2;UBERON:0010225,8.68e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0.464858073811369,1.23350366406548,0.929119112685311,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,11.8239177095026,6.33948724895227,21.7694521317811,19.8885535715407,30.8031537560367,1.96843472305724,6.875791660049,7.03304683260282,3.4214489204541,0.514137463516618,0.300343057843917,1.14330573052231,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0,0.837581326671744,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0,0,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,2.98244294329889,8.01815673539923,0,0,0,0,0.552567831062295,0,2.96579179256249,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,5.10224539890182,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,8.85741385813839,4.5826646677655,3.05163472634166,3.53853631779919,2.65992857058193,1.31631238292384,0,0,0.384751292518985,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9630515217103,0,5.3880822516828,0,0,1.45668227720456,0,0,3.0607276163049,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,3.35547218566157,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,1.17847017308398,0,0.209205692624666,0,0,3.60252173225874,13.8274432680913,0,0.859530882839914,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,6.36183751847443,8.58081458502926,0,0.137539436597234,0,0.899895566206002,0,4.55621674935185,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49841146896993,9.12404952024561,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,3.29470915235301,7.38626491168349,6.88091034828085,5.99016878299002,8.6314000088523,0,0,0,0,0,1.87333962322753,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0.796483835818512,0,0.310525913752519,0,0,0,0.150257608997218,0,1.62748293281865,0.909243296012797,0,3.71227007902795,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0,0,1.23520578864389,0.219284049578707,0.530067437837643,0,1.35153952522458,0,0,0,9.81634896677288,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,5.20256723281322,1.41696576325585,7.02388979851466,7.58930547690793,3.27693205088234,3.73449163306777,7.589355344697,12.8492478233239,0,0.235939446695481,0,0.115525666150338,0,0,0,2.25630985047772,0,0,0,0,0,3.64702956939331,1.56215619722769,6.20060389503552,4.81960157473692,1.09394961803644,0,0.496211178389294,0.351742488719241,0,1.07140367175657,2.35398605553177,0,0,0.0887023701626388,0,0,6.45712463279901,4.73563969652513,0,0,0.156986185701028,4.39923651764805,0,0,0,0,3.9312099297161,0,0,0,0,0,0,0,0,0.591660003652827,0.596493833314104,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,8.04864715171276,5.64388160621463,1.6906229103336,0,0,0.193373663920732,0,0,0,0,0,0,14.4772978982966,0,5.43931921527318,3.05445483238264,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,0.757786982182394,2.41167717140561,9.95003327350535,17.0664443172127,0.426467963801962,0.476128862927481,0.0645889098360061,0.248298857183432,0,0.190941474834495,0,0,0.684466602170562,0.202056159043763,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | |||
|short_description=p7@SGK1 | |||
}} |
Revision as of 14:00, 22 January 2014
Short description: | p7@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SGK1_5end |
Coexpression cluster: | C701_Mast_thalamus_globus_middle_substantia_corpus_medial |
Association with transcript: | 24bp_to_ENST00000367858, NM_001143676, uc003qeo.3, uc003qep.2_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | O00141Q7Z3I4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.20e-14 | 5 |
basophil mast progenitor cell | 2.20e-14 | 5 |
light melanocyte | 1.63e-08 | 3 |
endocrine cell | 9.43e-08 | 9 |