FFCP PHASE1:Hg19::chr7:26331560..26331647,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14974 | |||
|TSSclassifier=strong | |||
|UniProt=C9JUQ6 | |||
|association_with_transcript=0bp_to_ENST00000412416,uc010kuu.2_5end | |||
|coexpression_cluster_id=C1644 | |||
|description=CAGE_peak_1_at_SNX10_5end | |||
|id=chr7:26331560..26331647,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.66e-30!140;CL:0000037!9.95e-29!172;CL:0000566!9.95e-29!172;CL:0002032!1.47e-27!165;CL:0000837!1.47e-27!165;CL:0002087!6.89e-27!119;CL:0002031!6.61e-26!124;CL:0000988!1.58e-25!182;CL:0000766!6.02e-25!76;CL:0002057!1.19e-21!42;CL:0002009!2.53e-21!65;CL:0002194!4.57e-21!63;CL:0000576!4.57e-21!63;CL:0000040!4.57e-21!63;CL:0000559!4.57e-21!63;CL:0000763!1.04e-20!112;CL:0000049!1.04e-20!112;CL:0000557!2.07e-20!71;CL:0000860!2.84e-20!45;CL:0000839!6.29e-20!70;CL:0000945!5.31e-07!24;CL:0000826!5.31e-07!24;CL:0000838!7.68e-07!52;CL:0000542!9.05e-07!53;CL:0000051!9.05e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-16;33!CL:0002057;2.30e-16;33!CL:0000576;2.05e-15;48!CL:0000473;5.47e-15;39!CL:0000234;5.47e-15;39!CL:0000766;2.80e-12;69!CL:0002087;1.08e-08;104!CL:0000738;5.43e-08;136!CL:0000763;1.77e-07;100!CL:0000945;2.34e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.66e-31,136;CL:0002087,4.21e-29,115;CL:0000037,5.71e-29,168;CL:0002032,5.03e-28,161;CL:0000837,5.03e-28,161;CL:0000766,9.29e-28,72;CL:0002031,1.42e-27,120;CL:0000988,1.72e-26,177;CL:0002009,5.53e-24,61;CL:0000473,7.01e-24,48;CL:0000234,7.01e-24,48;CL:0002194,9.53e-24,59;CL:0000576,9.53e-24,59;CL:0000040,9.53e-24,59;CL:0000559,9.53e-24,59;CL:0000557,5.75e-23,67;CL:0000860,1.53e-22,42;CL:0002057,1.53e-22,42;CL:0000839,8.04e-22,66;CL:0000763,4.25e-21,108;CL:0000049,4.25e-21,108;CL:0000945,2.29e-07,24;CL:0000826,2.29e-07,24;CL:0000838,5.65e-07,52;CL:0000542,6.67e-07,53;CL:0000051,6.67e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.33e-22!102;UBERON:0003061!4.33e-22!102;UBERON:0001049!6.08e-22!57;UBERON:0005068!6.08e-22!57;UBERON:0006241!6.08e-22!57;UBERON:0007135!6.08e-22!57;UBERON:0001017!1.51e-19!82;UBERON:0002780!5.12e-19!41;UBERON:0001890!5.12e-19!41;UBERON:0006240!5.12e-19!41;UBERON:0003080!6.17e-19!42;UBERON:0005743!6.24e-19!86;UBERON:0002193!1.10e-18!112;UBERON:0007023!1.78e-17!115;UBERON:0002020!4.65e-17!34;UBERON:0003528!4.65e-17!34;UBERON:0002616!4.65e-17!59;UBERON:0001893!1.38e-16!34;UBERON:0000073!1.43e-16!94;UBERON:0001016!1.43e-16!94;UBERON:0001869!2.06e-16!32;UBERON:0000955!2.55e-16!69;UBERON:0006238!2.55e-16!69;UBERON:0002371!3.58e-16!80;UBERON:0002791!6.28e-16!33;UBERON:0001474!3.24e-15!86;UBERON:0002619!5.13e-14!22;UBERON:0003075!1.22e-13!86;UBERON:0007284!1.22e-13!86;UBERON:0002405!1.96e-13!115;UBERON:0000956!5.66e-13!25;UBERON:0000203!5.66e-13!25;UBERON:0001950!6.71e-13!20;UBERON:0002346!1.55e-12!90;UBERON:0003056!2.58e-11!61;UBERON:0004765!1.94e-10!101;UBERON:0001434!1.94e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.66e-15;32!UBERON:0003528;2.02e-15;34!UBERON:0002020;2.02e-15;34!UBERON:0001893;4.61e-15;34!UBERON:0002791;4.93e-15;32!UBERON:0002619;1.31e-14;22!UBERON:0002780;3.45e-14;41!UBERON:0001890;3.45e-14;41!UBERON:0000956;1.56e-13;25!UBERON:0000203;1.56e-13;25!UBERON:0001950;1.96e-13;20!UBERON:0000073;1.17e-12;53!UBERON:0002616;1.17e-12;53!UBERON:0000955;2.80e-08;68!UBERON:0001017;4.19e-08;75!UBERON:0001016;3.07e-07;83!UBERON:0000178;9.46e-07;15!UBERON:0000179;9.46e-07;15!UBERON:0000463;9.46e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.75e-24,98;UBERON:0003061,1.75e-24,98;UBERON:0001049,5.48e-23,56;UBERON:0005068,5.48e-23,56;UBERON:0006241,5.48e-23,56;UBERON:0007135,5.48e-23,56;UBERON:0000073,1.12e-21,53;UBERON:0002616,1.12e-21,53;UBERON:0002193,1.63e-20,108;UBERON:0001017,8.44e-20,81;UBERON:0002780,8.62e-20,41;UBERON:0001890,8.62e-20,41;UBERON:0003080,8.62e-20,41;UBERON:0006240,8.62e-20,41;UBERON:0002371,3.17e-18,76;UBERON:0003528,9.55e-18,34;UBERON:0002020,9.55e-18,34;UBERON:0001016,2.26e-17,89;UBERON:0001893,2.99e-17,34;UBERON:0001869,4.52e-17,32;UBERON:0001474,4.92e-17,82;UBERON:0002791,1.76e-16,32;UBERON:0000955,1.92e-16,68;UBERON:0006238,1.92e-16,68;UBERON:0007023,1.41e-15,114;UBERON:0002405,2.39e-15,93;UBERON:0002619,1.44e-14,22;UBERON:0004765,4.92e-14,90;UBERON:0000956,1.77e-13,25;UBERON:0000203,1.77e-13,25;UBERON:0001950,2.11e-13,20;UBERON:0003075,2.23e-13,82;UBERON:0007284,2.23e-13,82;UBERON:0003056,3.44e-12,61;UBERON:0002346,6.52e-12,86;UBERON:0001434,7.87e-11,100;UBERON:0010371,3.57e-10,104;UBERON:0000178,9.99e-07,15;UBERON:0000179,9.99e-07,15;UBERON:0000463,9.99e-07,15 | |||
|phase1_expression=0.363356758541113,3.42560838225573,0.140954404095971,0,0,0.872338524100369,15.1979926900986,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,5.72471974262113,3.28498620174922,1.38096903554283,20.8608597691907,18.8831355734875,20.1499600163019,10.6208354749204,10.747223146722,11.1467608787575,0,0.30120591877825,1.10926203050036,14.7962353108376,10.2361847390943,5.28480790802725,16.6198622559563,15.6424669026711,15.4077718208255,14.5545058255951,11.6601719766833,19.8333187078324,35.6225685009934,31.74157926986,40.5115382183653,24.6374779120026,14.8020439687857,20.7503268499719,23.5907761704163,26.6407134790265,35.2358522533992,16.2030469946211,14.846147722428,12.1883837934908,21.2713843683143,18.8305243539914,27.8657120711905,19.2832852193669,22.4650318953266,22.3767994029664,47.1687359267004,47.8712778291916,54.1305433176522,26.6992499538297,27.2344907851747,25.5357122088186,23.8686231993906,22.4237654920687,24.7595282963833,23.6105806027014,17.6773265274031,30.6968515817658,40.5610149718928,37.6309610938127,41.3027531651501,33.6985893439485,37.9947538889011,40.6635734343613,22.5160067555586,35.2082518642389,45.3007101336292,12.3197371122926,20.2071286166989,16.9006758234075,15.3622880123943,14.8146515203325,16.66782075868,23.1365705474702,11.4486450544244,11.9534723512984,14.6809297342735,13.379562984383,11.8954195721123,5.60508562981536,5.79444986505169,2.9506465517075,2.75107533924415,3.70082698199117,8.19213827414323,2.28145586643513,2.36723902867367,0,11.0296352316322,5.89211814949674,6.64601683750863,6.49929273036037,6.91693126518646,11.0550445425897,10.6884637992389,12.1594007825773,10.1431080007268,1.92772532110679,1.33770414044857,1.04535523804977,10.9910062416639,6.13152789763074,2.74901956386104,5.56643322442906,5.09704662918555,3.90650072313851,4.75226022224187,3.46322773878877,4.09557155694139,4.99722906209383,5.6826540490564,4.92676798152628,3.62892137804518,3.4767225451856,3.62061009706997,0,0,0.639312809217652,0,0,0,0,0,3.30871860074237,2.4390233720882,1.40535657109002,11.7881167947941,0,1.11235332835329,4.86821090482025,4.52737316978095,6.78085598646212,6.91622810485492,8.57992366170192,11.1437250398869,0,0,0,0,0,0,0,2.32575083252396,1.42306505074684,0.66944122552934,0.402829317109147,2.28081631715554,1.22031028774085,0,0,0.357198913136319,0.898117490504679,0.450445921933289,0,0,0,80.3860546359986,89.1894607541148,0,0,0,0,0,0.709336764396714,0,0,0,0.622422070799533,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,4.05847791642923,3.81844568827169,6.02289650316908,3.41526377162867,2.51806559810822,3.48581828608555,3.73179798055334,2.77552935963191,1.45990943630332,0,0,0,0,0,2.12952240071719,2.69735504124963,1.44606617930089,1.8749975364507,3.4860711054785,2.13543557199987,2.56179485504312,3.92442930250692,0.769494313892781,0,0,0,0,27.8861076608028,23.587853200263,11.2250082269467,0.882926198829301,1.8448265781467,3.25978839567199,2.30475599358114,0,1.70899253099772,1.48141512253647,0,0,4.3299402607582,15.4187438616852,0.587043471179108,0.721832238805369,0,1.14152491340759,3.95102198979638,4.29243081047436,21.9133135417784,21.7623966579491,19.7679445844009,3.74935335947108,2.85569617938061,3.82792762554443,3.40322386270824,5.52204483176528,4.21720947081732,27.0964780842769,19.2826070488965,2.48793738648926,1.58531948758658,1.76739406796932,1.14296209725904,3.4378958300245,7.03304683260282,0,9.87143929951906,20.4233279333864,14.0054951988983,0.112131084345361,0.87192013766656,0.4400297149257,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.857867961948885,0,0,0,0.710783897485092,0,12.0575750823834,6.10073421020206,4.29883862082845,3.64871341923571,7.5338563714819,10.5416969741516,0,0,0,0.434343920002738,0,0.179060963239896,5.49217205568284,4.72873824484625,6.68445482064504,5.51875056002918,10.6719742173435,36.4391590801341,13.1459098172208,15.7465289414288,15.3105300396759,114.598074663919,95.731666945288,165.766205374414,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,9.09779314940704,14.0214230532101,12.0602140317892,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,1.81289174387433,6.6167135200084,1.84161977871793,0,0,0.262248829918848,3.60959690325929,14.6329140498388,1.56869953835371,0,12.5606438382522,0,0.170093705276516,0.431831832204279,0,1.08378575017541,1.00337954770971,5.3524017339458,4.15538004464362,2.0148727924996,0.877039506583738,0.261435451024901,6.15480300279334,0.328014645699706,1.30151357865721,7.21287081534056,3.20493126864202,4.20798449594999,0.574265537996172,0.650060246036521,0,0,0.616194468458578,0.15350367472613,0,0.537101224341368,0.290033387828457,0.511359764496605,0.0890320356467374,7.27253627588304,2.3062808083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| |||
|short_description=p1@SNX10 | |||
}} |
Revision as of 16:08, 22 January 2014
Short description: | p1@SNX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNX10_5end |
Coexpression cluster: | C1644_Neutrophils_Eosinophils_medial_amygdala_frontal_paracentral_insula |
Association with transcript: | 0bp_to_ENST00000412416, uc010kuu.2_5end |
EntrezGene: | SNX10 |
HGNC: | 14974 |
UniProt: | C9JUQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.66e-31 | 136 |
nongranular leukocyte | 4.21e-29 | 115 |
hematopoietic stem cell | 5.71e-29 | 168 |
hematopoietic oligopotent progenitor cell | 5.03e-28 | 161 |
hematopoietic multipotent progenitor cell | 5.03e-28 | 161 |
myeloid leukocyte | 9.29e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 1.42e-27 | 120 |
hematopoietic cell | 1.72e-26 | 177 |
macrophage dendritic cell progenitor | 5.53e-24 | 61 |
defensive cell | 7.01e-24 | 48 |
phagocyte | 7.01e-24 | 48 |
monopoietic cell | 9.53e-24 | 59 |
monocyte | 9.53e-24 | 59 |
monoblast | 9.53e-24 | 59 |
promonocyte | 9.53e-24 | 59 |
granulocyte monocyte progenitor cell | 5.75e-23 | 67 |
classical monocyte | 1.53e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-22 | 42 |
myeloid lineage restricted progenitor cell | 8.04e-22 | 66 |
myeloid cell | 4.25e-21 | 108 |
common myeloid progenitor | 4.25e-21 | 108 |
lymphocyte of B lineage | 2.29e-07 | 24 |
pro-B cell | 2.29e-07 | 24 |
lymphoid lineage restricted progenitor cell | 5.65e-07 | 52 |
lymphocyte | 6.67e-07 | 53 |
common lymphoid progenitor | 6.67e-07 | 53 |