FFCP PHASE1:Hg19::chr7:27155133..27155160,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=109bp_to_ENST00000518046_5end | |||
|description=CAGE_peak_1_at_ENST00000518046_5end | |||
|id=chr7:27155133..27155160,+ | |||
|ontology_enrichment_celltype=CL:1000497!9.23e-15!18;CL:0002518!9.23e-15!18;CL:1000507!1.86e-12!12;CL:1000494!1.86e-12!12;CL:1000449!2.44e-12!16;CL:0000066!2.29e-09!254;CL:0002681!6.19e-09!13;CL:0002584!6.19e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.93e-32;17!CL:0002518;3.93e-32;17!CL:1000507;1.92e-29;10!CL:1000494;1.92e-29;10!CL:1000449;2.32e-24;15!CL:0002681;6.64e-14;12!CL:0002584;6.64e-14;12!CL:0000650;1.37e-10;2!CL:1000500;1.37e-10;2!CL:1000618;1.37e-10;2!CL:1001318;1.37e-10;2!CL:0002173;1.37e-10;2!CL:0000239;1.42e-07;3!CL:1000615;1.42e-07;3!CL:0002306;1.42e-07;3!CL:1000746;9.86e-07;7!CL:1000612;9.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,4.91e-32,17;CL:0002518,4.91e-32,17;CL:1000507,2.57e-29,10;CL:1000494,2.57e-29,10;CL:1000449,2.96e-24,15;CL:0002681,7.39e-14,12;CL:0002584,7.39e-14,12;CL:0000650,1.59e-10,2;CL:1000500,1.59e-10,2;CL:1000618,1.59e-10,2;CL:1001318,1.59e-10,2;CL:0002173,1.59e-10,2;CL:0000066,3.82e-08,253;CL:0000239,1.52e-07,3;CL:1000615,1.52e-07,3;CL:0002306,1.52e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.71e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.25e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.31e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001008!1.99e-22!45;UBERON:0006554!1.56e-21!44;UBERON:0002100!4.19e-19!216;UBERON:0003064!9.97e-19!37;UBERON:0009569!1.84e-18!113;UBERON:0005177!9.74e-18!107;UBERON:0000489!1.65e-17!32;UBERON:0000466!4.25e-17!126;UBERON:0002113!5.06e-17!27;UBERON:0003918!5.06e-17!27;UBERON:0005095!5.06e-17!27;UBERON:0007687!5.06e-17!27;UBERON:0003104!2.21e-16!238;UBERON:0009142!2.21e-16!238;UBERON:0000464!4.21e-16!104;UBERON:0000080!1.64e-14!18;UBERON:0002120!1.64e-14!18;UBERON:0004875!1.64e-14!18;UBERON:0005721!1.64e-14!18;UBERON:0005754!1.64e-14!18;UBERON:0007297!1.64e-14!18;UBERON:0004876!2.55e-14!20;UBERON:0004921!4.16e-14!129;UBERON:0004185!4.16e-14!129;UBERON:0003886!1.43e-13!63;UBERON:0006555!1.67e-13!17;UBERON:0005103!1.67e-13!17;UBERON:0000083!1.67e-13!17;UBERON:0009201!1.67e-13!17;UBERON:0004819!1.67e-13!17;UBERON:0006553!1.67e-13!17;UBERON:0003074!1.67e-13!17;UBERON:0003060!1.67e-13!17;UBERON:0000058!2.25e-13!26;UBERON:0002417!3.88e-13!61;UBERON:0000916!3.88e-13!61;UBERON:0009773!1.86e-12!12;UBERON:0001231!1.86e-12!12;UBERON:0004810!1.86e-12!12;UBERON:0005172!1.95e-12!55;UBERON:0005173!1.95e-12!55;UBERON:0004211!2.44e-12!16;UBERON:0001285!2.44e-12!16;UBERON:0007684!2.44e-12!16;UBERON:0003220!2.44e-12!16;UBERON:0004208!2.44e-12!16;UBERON:0001007!2.75e-12!155;UBERON:0001555!2.75e-12!155;UBERON:0007026!2.75e-12!155;UBERON:0003887!1.07e-11!21;UBERON:0004119!1.33e-11!169;UBERON:0000925!1.33e-11!169;UBERON:0006595!1.33e-11!169;UBERON:0000077!1.56e-11!130;UBERON:0002553!3.84e-11!70;UBERON:0005911!7.91e-11!82;UBERON:0005256!8.14e-11!143;UBERON:0003103!4.19e-10!69;UBERON:0000481!1.18e-09!347;UBERON:0001046!2.52e-09!19;UBERON:0000353!3.28e-09!17;UBERON:0001225!6.19e-09!13;UBERON:0008987!6.19e-09!13;UBERON:0000926!1.59e-08!448;UBERON:0004120!1.59e-08!448;UBERON:0006603!1.59e-08!448;UBERON:0000162!1.95e-08!14;UBERON:0001353!1.95e-08!14;UBERON:0000163!1.95e-08!14;UBERON:0006866!1.95e-08!14;UBERON:0000164!1.95e-08!14;UBERON:0000931!1.95e-08!14;UBERON:0003914!5.46e-08!118;UBERON:0005153!7.62e-08!37;UBERON:0004122!1.12e-07!15;UBERON:0003929!3.90e-07!54;UBERON:0003937!4.93e-07!12;UBERON:0005399!4.93e-07!12;UBERON:0004111!5.80e-07!241;UBERON:0005409!9.29e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.92e-29;10!UBERON:0009773;1.92e-29;10!UBERON:0001231;1.92e-29;10!UBERON:0004810;1.92e-29;10!UBERON:0002113;3.31e-26;24!UBERON:0011143;3.31e-26;24!UBERON:0000489;6.60e-25;29!UBERON:0006555;2.32e-24;15!UBERON:0004819;2.32e-24;15!UBERON:0001285;2.32e-24;15!UBERON:0007684;2.32e-24;15!UBERON:0006554;5.57e-24;30!UBERON:0001008;5.57e-24;30!UBERON:0000353;1.17e-14;15!UBERON:0001225;6.64e-14;12!UBERON:0008987;6.64e-14;12!UBERON:0001851;5.41e-11;15!UBERON:0005172;1.13e-10;52!UBERON:0005173;1.13e-10;52!UBERON:0003567;1.37e-10;2!UBERON:0003838;1.37e-10;2!UBERON:0003586;1.37e-10;2!UBERON:0005169;1.37e-10;2!UBERON:0002321;1.37e-10;2!UBERON:0005215;1.37e-10;2!UBERON:0002303;1.37e-10;2!UBERON:0002319;1.37e-10;2!UBERON:0005177;1.23e-08;99!UBERON:0002417;2.94e-08;58!UBERON:0000916;2.94e-08;58!UBERON:0000058;7.67e-08;10!UBERON:0006853;1.42e-07;3!UBERON:0007685;1.42e-07;3!UBERON:0004134;1.42e-07;3!UBERON:0000074;9.86e-07;7!UBERON:0001229;9.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.57e-29,10;UBERON:0002113,2.55e-28,26;UBERON:0003918,2.55e-28,26;UBERON:0011143,2.55e-28,26;UBERON:0005095,2.55e-28,26;UBERON:0007687,2.55e-28,26;UBERON:0006555,5.62e-28,16;UBERON:0004819,5.62e-28,16;UBERON:0000489,6.34e-27,31;UBERON:0004211,2.96e-24,15;UBERON:0009773,2.96e-24,15;UBERON:0001231,2.96e-24,15;UBERON:0001285,2.96e-24,15;UBERON:0007684,2.96e-24,15;UBERON:0004208,2.96e-24,15;UBERON:0006554,5.89e-22,47;UBERON:0001008,2.02e-21,48;UBERON:0005177,3.85e-17,101;UBERON:0005172,2.49e-16,54;UBERON:0005173,2.49e-16,54;UBERON:0000058,7.44e-15,19;UBERON:0000353,1.20e-14,15;UBERON:0002417,2.33e-14,60;UBERON:0000916,2.33e-14,60;UBERON:0003103,5.58e-14,68;UBERON:0001225,7.39e-14,12;UBERON:0008987,7.39e-14,12;UBERON:0009569,1.52e-13,112;UBERON:0001851,5.89e-11,15;UBERON:0002100,8.36e-11,199;UBERON:0003567,1.59e-10,2;UBERON:0003838,1.59e-10,2;UBERON:0003586,1.59e-10,2;UBERON:0005169,1.59e-10,2;UBERON:0002321,1.59e-10,2;UBERON:0005215,1.59e-10,2;UBERON:0002303,1.59e-10,2;UBERON:0002319,1.59e-10,2;UBERON:0003104,4.78e-10,160;UBERON:0009142,4.78e-10,160;UBERON:0005103,8.78e-10,8;UBERON:0000083,8.78e-10,8;UBERON:0009201,8.78e-10,8;UBERON:0006553,8.78e-10,8;UBERON:0003074,8.78e-10,8;UBERON:0003060,8.78e-10,8;UBERON:0000080,1.06e-08,9;UBERON:0002120,1.06e-08,9;UBERON:0004875,1.06e-08,9;UBERON:0005721,1.06e-08,9;UBERON:0005754,1.06e-08,9;UBERON:0007297,1.06e-08,9;UBERON:0003914,9.47e-08,117;UBERON:0002394,1.48e-07,6;UBERON:0003928,1.48e-07,6;UBERON:0006853,1.52e-07,3;UBERON:0007685,1.52e-07,3;UBERON:0004134,1.52e-07,3;UBERON:0004876,4.02e-07,11 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0.17859945656816,0,0.450445921933289,0,0,0,0,0,0,0,0,0.529636723252875,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.306923946576125,0,0.896974044789907,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0.464841513839837,1.0877350463246,0.200506470303285,0.0920809889358963,0.114814448164607,0.546273504020151,0.262248829918848,1.35359883872224,0.616122696835318,3.13739907670742,4.38417673959782,1.16106791782163,0,0.170093705276516,0.863663664408557,3.08454505380579,2.70946437543853,2.00675909541941,3.05851527654046,0.831076008928724,5.59686886805446,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0.460511024178389,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.74129687641568,0.572499546967965,0,0,0.571890581771475,0,0,0.318203247925937,0,0.359744915166629,0.823611089208164,0.471249609382746,0,0,0,0.975267478179181,0.243713489631284,0,0,0.424216295861138,1.13008116620243,2.75682671773062,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,10.2289012850309,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,1.22722419002586,0,0,1.43789361835723,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95397290339238,0.816164040795739,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0.485560759068186,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0,0.34823682632161,2.62090002363045,0,0,0,0,0.678923115418936,0,0,0,0,0,0.195551382734803,0.480952921509202,0.213452994739353,0.19980960958213,0.864542502924636,1.25990255782507,0,2.16082196982225,0.869767748958028,0.235694034616795,0,0,0,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,1.73100140845494,0.105600336519406,0.179287339332845,1.15149118391667,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,1.71086837884329,0.704815022316672,0.640724475406168,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.0620964029413835,0,0,0,0,7.29324041064332,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0.466311601748341,0.147855149989634,0,0.449803112163605,0.776314784381297,0.414706207840855,0.797525143673985,0,1.05180326298053,0.380805212168795,0,0,0.644463342254931,0,0,0,0.343395705182793,0,0,0,0,0,0.906823702049089,0.463044948647668,0.489473409012935,0.179088841081487,0,1.97355644620836,0.176689145945881,0.771656153083659,0,2.30617366729152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.231051332300676,0,0,0.397832444232549,0.150420656698515,0,0,0,0.163771917510097,3.54854606920909,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0.156986185701028,0,0.560544326627578,2.73947616152849,4.31855182437243,3.8220135030964,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0.9164274741762,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0,0,0,0,1.36410323371586,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,1.27940389140589,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0.332660356546013,1.13964576055364,0.106727345877715,0,1.25755282949222,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p1@ENST00000518046 | |||
}} |
Revision as of 16:11, 22 January 2014
Short description: | p1@ENST00000518046 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000518046_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_ENST00000518046_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 4.91e-32 | 17 |
kidney epithelial cell | 4.91e-32 | 17 |
kidney tubule cell | 2.57e-29 | 10 |
nephron tubule epithelial cell | 2.57e-29 | 10 |
epithelial cell of nephron | 2.96e-24 | 15 |
kidney cortical cell | 7.39e-14 | 12 |
renal cortical epithelial cell | 7.39e-14 | 12 |
mesangial cell | 1.59e-10 | 2 |
kidney interstitial cell | 1.59e-10 | 2 |
juxtaglomerular complex cell | 1.59e-10 | 2 |
renal interstitial pericyte | 1.59e-10 | 2 |
extraglomerular mesangial cell | 1.59e-10 | 2 |
epithelial cell | 3.82e-08 | 253 |
brush border epithelial cell | 1.52e-07 | 3 |
kidney cortex tubule cell | 1.52e-07 | 3 |
epithelial cell of proximal tubule | 1.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.31e-10 | 2 |