FFCP PHASE1:Mm9::chr1:85196170..85196197,+: Difference between revisions
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{{FFCP|EntrezGene=665378|HGNC=|MCL_coexpression_id=1240|UniProt=|association_with_transcript=0bp_to_ENSMUST00000113407,ENSMUST00000160058,NM_001081746,uc007btq.1,uc007btr.1_5end|description=CAGE_peak_1_at_Gm7609_5end|id=chr1:85196170..85196197,+|ontology_enrichment_celltype=CL:0002031!1.48e-15!25;CL:0002293!1.32e-14!3;CL:0000063!3.07e-14!66;CL:0002320!1.49e-13!46;CL:0000134!1.49e-13!46;CL:0000553!4.99e-12!6;CL:0000556!4.99e-12!6;CL:0000988!8.11e-12!32;CL:0002032!8.11e-12!32;CL:0000037!8.11e-12!32;CL:0000566!8.11e-12!32;CL:0000837!8.11e-12!32;CL:0000839!1.08e-11!13;CL:0000219!3.20e-11!54;CL:0000414!5.46e-10!11;CL:0000763!2.10e-09!16;CL:0000738!2.12e-08!17;CL:0002087!2.12e-08!17;CL:0000050!4.69e-08!9;CL:0000049!7.77e-08!19;CL:0000548!5.44e-07!115;CL:0000004!5.44e-07!115;CL:0000255!5.44e-07!115;CL:0002371!9.67e-07!118|ontology_enrichment_celltype_v019_2=CL:0002293,1.19e-23,3;CL:0000839,9.66e-20,13;CL:0000553,1.03e-19,6;CL:0000556,1.03e-19,6;CL:0000763,5.12e-16,16;CL:0002476,4.36e-15,2;CL:0002031,9.81e-14,25;CL:0000049,1.83e-13,19;CL:0000050,2.90e-13,9;CL:0002320,4.91e-12,46;CL:0000134,4.91e-12,46;CL:0000988,1.22e-10,32;CL:0002032,1.22e-10,32;CL:0000037,1.22e-10,32;CL:0000837,1.22e-10,32;CL:0000219,3.87e-10,54;CL:0000213,7.41e-09,1;CL:0002078,7.41e-09,1;CL:0000115,7.41e-09,1;CL:0002262,7.41e-09,1;CL:1000398,7.41e-09,1;CL:0000945,1.47e-08,1;CL:0000236,1.47e-08,1;CL:0000826,1.47e-08,1;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1;CL:0002194,5.19e-08,4;CL:0000766,5.19e-08,4;CL:0000234,5.19e-08,4;CL:0000576,5.19e-08,4;CL:0000235,5.19e-08,4;CL:0000864,5.19e-08,4;CL:0002009,5.19e-08,4;CL:0000040,5.19e-08,4;CL:0000559,5.19e-08,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.73e-15!48;UBERON:0002384!1.49e-13!46;UBERON:0002405!3.19e-13!70;UBERON:0002465!6.81e-13!3;UBERON:0002390!5.42e-10!45;UBERON:0003061!5.42e-10!45;UBERON:0002371!2.10e-09!16;UBERON:0001962!2.67e-09!2;UBERON:0001961!2.67e-09!2;UBERON:0001744!2.67e-09!2|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-16,16;UBERON:0002390,1.55e-12,45;UBERON:0003061,1.55e-12,45;UBERON:0002384,4.91e-12,46;UBERON:0002193,1.05e-11,48;UBERON:0002405,1.05e-11,48;UBERON:0001474,1.33e-11,22;UBERON:0004765,1.33e-11,22;UBERON:0001434,1.33e-11,22;UBERON:0002394,7.41e-09,1;UBERON:0001281,7.41e-09,1;UBERON:0000353,7.41e-09,1;UBERON:0003497,7.41e-09,1;UBERON:0003909,7.41e-09,1;UBERON:0003928,7.41e-09,1;UBERON:0003835,7.41e-09,1;UBERON:0003513,7.41e-09,1;UBERON:0001280,7.41e-09,1;UBERON:0004647,7.41e-09,1;UBERON:0002294,7.41e-09,1;UBERON:0001173,7.41e-09,1;UBERON:0004912,7.41e-09,1;UBERON:0005171,7.41e-09,1;UBERON:0002204,6.69e-08,32;UBERON:0003081,1.28e-07,87|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0.171200729931206,0.524522414513984,0,1.21485160433896,0,3.62781490161973,5.34746291062381,2.97072756258621,0,0,0,0.95995453676044,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98579914975201,1.72084775396277,0,0,0,0,0,0,0.259786004602869,0,0,12.8326477414318,12.7402619853323,14.2213340630666,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm7609}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:665378 | |||
|HGNC= | |||
|MCL_coexpression_id=1240 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000113407,ENSMUST00000160058,NM_001081746,uc007btq.1,uc007btr.1_5end | |||
|cluster_id=chr1:85196170..85196197,+ | |||
|description=CAGE_peak_1_at_Gm7609_5end | |||
|id=chr1:85196170..85196197,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.48e-15!25;CL:0002293!1.32e-14!3;CL:0000063!3.07e-14!66;CL:0002320!1.49e-13!46;CL:0000134!1.49e-13!46;CL:0000553!4.99e-12!6;CL:0000556!4.99e-12!6;CL:0000988!8.11e-12!32;CL:0002032!8.11e-12!32;CL:0000037!8.11e-12!32;CL:0000566!8.11e-12!32;CL:0000837!8.11e-12!32;CL:0000839!1.08e-11!13;CL:0000219!3.20e-11!54;CL:0000414!5.46e-10!11;CL:0000763!2.10e-09!16;CL:0000738!2.12e-08!17;CL:0002087!2.12e-08!17;CL:0000050!4.69e-08!9;CL:0000049!7.77e-08!19;CL:0000548!5.44e-07!115;CL:0000004!5.44e-07!115;CL:0000255!5.44e-07!115;CL:0002371!9.67e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.19e-23,3;CL:0000839,9.66e-20,13;CL:0000553,1.03e-19,6;CL:0000556,1.03e-19,6;CL:0000763,5.12e-16,16;CL:0002476,4.36e-15,2;CL:0002031,9.81e-14,25;CL:0000049,1.83e-13,19;CL:0000050,2.90e-13,9;CL:0002320,4.91e-12,46;CL:0000134,4.91e-12,46;CL:0000988,1.22e-10,32;CL:0002032,1.22e-10,32;CL:0000037,1.22e-10,32;CL:0000837,1.22e-10,32;CL:0000219,3.87e-10,54;CL:0000213,7.41e-09,1;CL:0002078,7.41e-09,1;CL:0000115,7.41e-09,1;CL:0002262,7.41e-09,1;CL:1000398,7.41e-09,1;CL:0000945,1.47e-08,1;CL:0000236,1.47e-08,1;CL:0000826,1.47e-08,1;CL:0000057,1.74e-08,1;CL:0000632,1.74e-08,1;CL:0002194,5.19e-08,4;CL:0000766,5.19e-08,4;CL:0000234,5.19e-08,4;CL:0000576,5.19e-08,4;CL:0000235,5.19e-08,4;CL:0000864,5.19e-08,4;CL:0002009,5.19e-08,4;CL:0000040,5.19e-08,4;CL:0000559,5.19e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.73e-15!48;UBERON:0002384!1.49e-13!46;UBERON:0002405!3.19e-13!70;UBERON:0002465!6.81e-13!3;UBERON:0002390!5.42e-10!45;UBERON:0003061!5.42e-10!45;UBERON:0002371!2.10e-09!16;UBERON:0001962!2.67e-09!2;UBERON:0001961!2.67e-09!2;UBERON:0001744!2.67e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-16,16;UBERON:0002390,1.55e-12,45;UBERON:0003061,1.55e-12,45;UBERON:0002384,4.91e-12,46;UBERON:0002193,1.05e-11,48;UBERON:0002405,1.05e-11,48;UBERON:0001474,1.33e-11,22;UBERON:0004765,1.33e-11,22;UBERON:0001434,1.33e-11,22;UBERON:0002394,7.41e-09,1;UBERON:0001281,7.41e-09,1;UBERON:0000353,7.41e-09,1;UBERON:0003497,7.41e-09,1;UBERON:0003909,7.41e-09,1;UBERON:0003928,7.41e-09,1;UBERON:0003835,7.41e-09,1;UBERON:0003513,7.41e-09,1;UBERON:0001280,7.41e-09,1;UBERON:0004647,7.41e-09,1;UBERON:0002294,7.41e-09,1;UBERON:0001173,7.41e-09,1;UBERON:0004912,7.41e-09,1;UBERON:0005171,7.41e-09,1;UBERON:0002204,6.69e-08,32;UBERON:0003081,1.28e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0.171200729931206,0.524522414513984,0,1.21485160433896,0,3.62781490161973,5.34746291062381,2.97072756258621,0,0,0,0.95995453676044,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98579914975201,1.72084775396277,0,0,0,0,0,0,0.259786004602869,0,0,12.8326477414318,12.7402619853323,14.2213340630666,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm7609 | |||
}} |
Revision as of 02:39, 6 August 2015
Short description: | p1@Gm7609 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm7609_5end |
Coexpression cluster: | MCL_coexpression_mm9:1240 |
Association with transcript: | 0bp_to_ENSMUST00000113407, ENSMUST00000160058, NM_001081746, uc007btq.1, uc007btr.1_5end |
EntrezGene: | 665378 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.12e-16 | 16 |
hematopoietic system | 1.55e-12 | 45 |
blood island | 1.55e-12 | 45 |
connective tissue | 4.91e-12 | 46 |
hemolymphoid system | 1.05e-11 | 48 |
immune system | 1.05e-11 | 48 |
bone element | 1.33e-11 | 22 |
skeletal element | 1.33e-11 | 22 |
skeletal system | 1.33e-11 | 22 |
bile duct | 7.41e-09 | 1 |
hepatic sinusoid | 7.41e-09 | 1 |
parenchyma | 7.41e-09 | 1 |
abdomen blood vessel | 7.41e-09 | 1 |
sinusoid | 7.41e-09 | 1 |
digestive system duct | 7.41e-09 | 1 |
abdominal segment blood vessel | 7.41e-09 | 1 |
trunk blood vessel | 7.41e-09 | 1 |
liver parenchyma | 7.41e-09 | 1 |
liver lobule | 7.41e-09 | 1 |
biliary system | 7.41e-09 | 1 |
biliary tree | 7.41e-09 | 1 |
biliary bud | 7.41e-09 | 1 |
hepatic duct | 7.41e-09 | 1 |
musculoskeletal system | 6.69e-08 | 32 |
lateral plate mesoderm | 1.28e-07 | 87 |