FFCP PHASE2:Hg19::chr13:28494130..28494168,+
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| Short description: | p1@PDX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PDX1_5end |
| Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
| Association with transcript: | 0bp_to_ENST00000381033, NM_000209, uc001urt.2_5end |
| EntrezGene: | PDX1 |
| HGNC: | 6107 |
| UniProt: | P52945 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@PDX1 |
|---|
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25
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125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 7.84e-16 | 4 |
| epithelial cell of large intestine | 1.11e-14 | 2 |
| epithelial cell of stomach | 4.73e-10 | 3 |
| epithelial cell of alimentary canal | 2.49e-08 | 20 |
| bladder cell | 5.07e-08 | 1 |
| lower urinary tract cell | 5.07e-08 | 1 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 7.58e-30 | 25 |
| intestine | 2.02e-29 | 17 |
| small intestine | 1.52e-22 | 4 |
| intestinal mucosa | 7.84e-16 | 4 |
| wall of intestine | 7.84e-16 | 4 |
| gastrointestinal system mucosa | 7.84e-16 | 4 |
| gastrointestinal system epithelium | 7.84e-16 | 4 |
| intestinal epithelium | 7.84e-16 | 4 |
| rectum | 8.68e-16 | 4 |
| epithelium of mucosa | 1.02e-13 | 8 |
Showing 1 to 10 of 42 entries
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system cancer | 5.56e-23 | 14 |
| tubular adenocarcinoma | 1.47e-14 | 2 |
| adenocarcinoma | 1.48e-12 | 25 |
| non-Hodgkin lymphoma | 1.63e-08 | 1 |
| cutaneous T cell lymphoma | 1.63e-08 | 1 |
| mycosis fungoides | 1.63e-08 | 1 |
Showing 1 to 6 of 6 entries
