FF:11532-120A2: Difference between revisions

Revision as of 18:04, 29 June 2012

Name:	Trabecular Meshwork Cells, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	eye
dev stage	NA
sex	NA
age	NA
cell type	trabecular meshwork cell
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	SC6595
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.143
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.161
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.091
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.383
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.25
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.14
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.23
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0767
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.12
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.667
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.726
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.14
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.245
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11340

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.906
MA0003.1	MA0003.1	0.402
MA0004.1	MA0004.1	0.146
MA0006.1	MA0006.1	0.377
MA0007.1	MA0007.1	0.0134
MA0009.1	MA0009.1	0.379
MA0014.1	MA0014.1	0.792
MA0017.1	MA0017.1	0.571
MA0018.2	MA0018.2	0.00972
MA0019.1	MA0019.1	0.89
MA0024.1	MA0024.1	5.87271e-4
MA0025.1	MA0025.1	0.192
MA0027.1	MA0027.1	0.236
MA0028.1	MA0028.1	0.84
MA0029.1	MA0029.1	0.498
MA0030.1	MA0030.1	0.85
MA0031.1	MA0031.1	0.083
MA0035.2	MA0035.2	0.0978
MA0038.1	MA0038.1	2.15483e-6
MA0039.2	MA0039.2	0.109
MA0040.1	MA0040.1	0.517
MA0041.1	MA0041.1	0.336
MA0042.1	MA0042.1	0.691
MA0043.1	MA0043.1	0.00974
MA0046.1	MA0046.1	0.0016
MA0047.2	MA0047.2	0.6
MA0048.1	MA0048.1	0.132
MA0050.1	MA0050.1	2.15522e-8
MA0051.1	MA0051.1	1.34126e-5
MA0052.1	MA0052.1	0.077
MA0055.1	MA0055.1	8.51397e-5
MA0057.1	MA0057.1	0.364
MA0058.1	MA0058.1	0.412
MA0059.1	MA0059.1	0.265
MA0060.1	MA0060.1	3.99466e-15
MA0061.1	MA0061.1	0.211
MA0062.2	MA0062.2	0.0974
MA0065.2	MA0065.2	0.483
MA0066.1	MA0066.1	0.651
MA0067.1	MA0067.1	0.00778
MA0068.1	MA0068.1	0.779
MA0069.1	MA0069.1	0.633
MA0070.1	MA0070.1	0.00475
MA0071.1	MA0071.1	0.14
MA0072.1	MA0072.1	0.927
MA0073.1	MA0073.1	0.696
MA0074.1	MA0074.1	0.436
MA0076.1	MA0076.1	0.459
MA0077.1	MA0077.1	0.0509
MA0078.1	MA0078.1	0.792
MA0079.2	MA0079.2	0.919
MA0080.2	MA0080.2	1.52236e-4
MA0081.1	MA0081.1	0.103
MA0083.1	MA0083.1	0.17
MA0084.1	MA0084.1	0.279
MA0087.1	MA0087.1	0.469
MA0088.1	MA0088.1	0.107
MA0090.1	MA0090.1	0.212
MA0091.1	MA0091.1	0.0366
MA0092.1	MA0092.1	0.417
MA0093.1	MA0093.1	0.237
MA0099.2	MA0099.2	0.00491
MA0100.1	MA0100.1	0.778
MA0101.1	MA0101.1	0.356
MA0102.2	MA0102.2	0.0116
MA0103.1	MA0103.1	0.125
MA0104.2	MA0104.2	0.61
MA0105.1	MA0105.1	0.55
MA0106.1	MA0106.1	0.397
MA0107.1	MA0107.1	0.0954
MA0108.2	MA0108.2	5.85928e-5
MA0111.1	MA0111.1	0.312
MA0112.2	MA0112.2	0.321
MA0113.1	MA0113.1	0.0221
MA0114.1	MA0114.1	0.505
MA0115.1	MA0115.1	0.984
MA0116.1	MA0116.1	0.919
MA0117.1	MA0117.1	0.317
MA0119.1	MA0119.1	0.35
MA0122.1	MA0122.1	0.981
MA0124.1	MA0124.1	0.0947
MA0125.1	MA0125.1	0.323
MA0131.1	MA0131.1	0.598
MA0135.1	MA0135.1	0.112
MA0136.1	MA0136.1	0.00398
MA0137.2	MA0137.2	0.0468
MA0138.2	MA0138.2	0.814
MA0139.1	MA0139.1	0.727
MA0140.1	MA0140.1	0.183
MA0141.1	MA0141.1	0.203
MA0142.1	MA0142.1	0.89
MA0143.1	MA0143.1	0.467
MA0144.1	MA0144.1	0.273
MA0145.1	MA0145.1	0.7
MA0146.1	MA0146.1	0.0158
MA0147.1	MA0147.1	0.336
MA0148.1	MA0148.1	0.758
MA0149.1	MA0149.1	0.721
MA0150.1	MA0150.1	0.751
MA0152.1	MA0152.1	0.905
MA0153.1	MA0153.1	0.181
MA0154.1	MA0154.1	0.739
MA0155.1	MA0155.1	0.156
MA0156.1	MA0156.1	0.0394
MA0157.1	MA0157.1	0.164
MA0159.1	MA0159.1	0.399
MA0160.1	MA0160.1	0.135
MA0162.1	MA0162.1	0.24
MA0163.1	MA0163.1	0.529
MA0164.1	MA0164.1	0.621
MA0258.1	MA0258.1	0.753
MA0259.1	MA0259.1	0.682

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11340

Novel motif	Logo	P-value
1	1	0.527
10	10	0.239
100	100	0.708
101	101	0.172
102	102	0.637
103	103	0.287
104	104	0.337
105	105	0.0283
106	106	0.838
107	107	0.441
108	108	0.571
109	109	0.105
11	11	0.228
110	110	0.097
111	111	0.361
112	112	0.347
113	113	0.643
114	114	0.244
115	115	0.982
116	116	0.361
117	117	0.977
118	118	0.755
119	119	0.508
12	12	0.566
120	120	0.48
121	121	0.309
122	122	0.833
123	123	0.0377
124	124	0.642
125	125	0.375
126	126	0.898
127	127	0.86
128	128	0.821
129	129	0.431
13	13	0.47
130	130	0.00712
131	131	0.83
132	132	0.206
133	133	0.0216
134	134	0.426
135	135	0.587
136	136	0.825
137	137	0.165
138	138	0.113
139	139	0.0393
14	14	0.924
140	140	0.255
141	141	0.357
142	142	0.568
143	143	0.633
144	144	0.551
145	145	0.386
146	146	0.00695
147	147	0.729
148	148	0.125
149	149	0.865
15	15	0.513
150	150	0.368
151	151	0.76
152	152	0.297
153	153	0.172
154	154	0.0436
155	155	0.215
156	156	0.388
157	157	0.425
158	158	0.15
159	159	0.969
16	16	0.888
160	160	0.0054
161	161	0.753
162	162	0.0376
163	163	0.437
164	164	0.371
165	165	0.0823
166	166	0.79
167	167	0.165
168	168	0.932
169	169	0.233
17	17	0.58
18	18	0.518
19	19	0.28
2	2	0.531
20	20	0.693
21	21	0.798
22	22	0.11
23	23	0.741
24	24	0.158
25	25	0.434
26	26	0.211
27	27	0.564
28	28	0.0574
29	29	0.565
3	3	0.647
30	30	0.0434
31	31	0.673
32	32	0.0207
33	33	0.592
34	34	0.104
35	35	0.34
36	36	0.781
37	37	0.823
38	38	0.542
39	39	0.51
4	4	0.341
40	40	0.0269
41	41	0.464
42	42	0.735
43	43	0.484
44	44	0.158
45	45	0.266
46	46	0.323
47	47	0.492
48	48	0.12
49	49	0.564
5	5	0.221
50	50	0.0516
51	51	0.457
52	52	0.688
53	53	0.444
54	54	0.489
55	55	0.657
56	56	0.235
57	57	0.696
58	58	0.0608
59	59	0.183
6	6	0.309
60	60	0.516
61	61	0.791
62	62	0.107
63	63	0.182
64	64	0.0603
65	65	0.178
66	66	0.0211
67	67	0.654
68	68	0.00512
69	69	0.0359
7	7	0.948
70	70	0.597
71	71	0.492
72	72	0.15
73	73	0.189
74	74	0.593
75	75	0.848
76	76	0.0999
77	77	0.178
78	78	0.369
79	79	0.628
8	8	0.0981
80	80	0.852
81	81	0.93
82	82	0.262
83	83	0.662
84	84	0.499
85	85	0.56
86	86	0.528
87	87	0.403
88	88	0.188
89	89	0.511
9	9	0.177
90	90	0.017
91	91	0.423
92	92	0.23
93	93	0.8
94	94	0.763
95	95	0.48
96	96	0.804
97	97	0.655
98	98	0.44
99	99	1.42904e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11340

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000188 human trabecular meshwork cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000115 (endothelial cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000222 (mesodermal cell)
0002367 (trabecular meshwork cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0002346 (neurectoderm)
0000064 (organ part)
0000047 (simple eye)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0005291 (embryonic tissue)
0000020 (sense organ)
0002049 (vasculature)
0002203 (vasculature of eye)
0001768 (uvea)
0001032 (sensory system)
0002200 (vasculature of head)
0006876 (vasculature of organ)
0005085 (ectodermal placode)
0001048 (primordium)
0006598 (presumptive structure)
0007798 (vascular system)
0002532 (epiblast (generic))
0005969 (reticulum trabeculare)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000924 (ectoderm)
0004535 (cardiovascular system)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0003075 (neural plate)
0003056 (pre-chordal neural plate)
0001009 (circulatory system)
0003072 (optic cup)
0003956 (aqueous drainage system)
0003071 (eye primordium)
0006601 (presumptive ectoderm)
0004128 (optic vesicle)
0007284 (presumptive neural plate)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

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 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.01!102.08!TCF21;;chr9:132427883..132427951,+!p2@PRRX2!1.87!72.86!PRRX2;;chr16:86544113..86544145,+!p1@FOXF1!1.86!87.28!FOXF1;;chr6:34204921..34204939,+!p3@HMGA1!1.82!1811.98!HMGA1;;chr7:19157248..19157268,-!p1@TWIST1!1.67!121.43!TWIST1;;chr9:132427972..132428056,+!p1@PRRX2!1.60!50.09!PRRX2;;chr4:111544219..111544240,-!p1@PITX2!1.56!35.67!PITX2;;chr5:2751762..2751784,-!p1@IRX2!1.50!30.74!IRX2;;chr6:50786591..50786614,+!p1@TFAP2B!1.50!30.36!TFAP2B;;chr2:239756671..239756732,+!p1@TWIST2!1.48!91.07!TWIST2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.47!28.84!POU3F3;;chr2:239756739..239756755,+!p2@TWIST2!1.44!45.16!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!1.43!68.68!HMGA2;;chr3:128206762..128206781,-!p2@GATA2!1.34!125.61!GATA2;;chr11:46299199..46299233,+!p1@CREB3L1!1.34!103.98!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.30!25.42!PRRX1;;chr3:128212033..128212051,-!p1@GATA2!1.29!18.59!GATA2;;chr19:46801639..46801699,+!p1@HIF3A!1.27!17.46!HIF3A;;chr4:111558135..111558198,-!p2@PITX2!1.26!17.08!PITX2;;chr9:129376201..129376225,+!p1@LMX1B!1.24!16.32!LMX1B;;chr9:129376233..129376251,+!p2@LMX1B!1.21!15.18!LMX1B;;chr20:42543441..42543497,+!p1@TOX2!1.17!61.10!TOX2;;chr17:41622925..41622976,-!p3@ETV4!1.17!20.87!ETV4;;chr1:170632285..170632309,+!p1@PRRX1!1.17!15.56!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.15!287.26!AEBP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.15!22.39!CREB3L1;;chr17:41622765..41622821,-!p2@ETV4!1.14!19.73!ETV4;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.32!TFAP2C;;chr6:1389789..1389821,+!p1@FOXF2!1.13!17.08!FOXF2;;chr14:74256787..74256858,-!p6@C14orf43!1.13!12.52!C14orf43;;chr17:41623009..41623053,-!p4@ETV4!1.10!18.59!ETV4;;chr6:85474299..85474324,-!p1@TBX18!1.09!20.11!TBX18;;chr17:41623692..41623715,-!p1@ETV4!1.08!47.05!ETV4;;chr19:45260775..45260838,+!p5@BCL3!1.08!14.42!BCL3;;chr2:5832508..5832524,+!p1@SOX11!1.07!10.63!SOX11;;chr17:59477233..59477263,+!p1@TBX2!1.06!33.01!TBX2;;chr15:57511609..57511651,+!p2@TCF12!1.05!17.46!TCF12;;chr5:3595977..3595999,+!p1@IRX1!1.05!10.25!IRX1;;chr16:86600426..86600441,+!p1@FOXC2!1.02!23.53!FOXC2;;chr20:42543506..42543549,+!p2@TOX2!1.02!23.15!TOX2;;chr17:41622731..41622764,-!p5@ETV4!1.02!9.49!ETV4;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.02!9.49!POU3F3;;chr12:2986206..2986258,-!p2@FOXM1!1.00!55.02!FOXM1;;chr3:138665937..138665968,-!p1@FOXL2!1.00!9.11!FOXL2;;chr4:111544254..111544270,-!p3@PITX2!1.00!9.11!PITX2;;chr14:61116183..61116208,-!p1@SIX1!0.99!33.77!SIX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.97!14.04!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!0.95!37.57!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!0.95!15.56!HMGA2;;chr18:52969674..52969685,-!p24@TCF4!0.95!7.97!TCF4;;chr6:85473156..85473210,-!p2@TBX18!0.94!9.49!TBX18;;chr17:41622834..41622883,-!p6@ETV4!0.93!9.11!ETV4;;chr18:52969844..52969895,-!p27@TCF4!0.93!7.59!TCF4;;chr5:3595934..3595957,+!p2@IRX1!0.93!7.59!IRX1;;chr12:2986275..2986363,-!p1@FOXM1!0.91!74.00!FOXM1;;chr12:66218212..66218244,+!p5@HMGA2!0.91!10.63!HMGA2;;chr19:38720294..38720348,-!p1@DPF1!0.91!9.11!DPF1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.26!NR2F1;;chr20:42295713..42295738,+!p2@MYBL2!0.89!41.74!MYBL2;;chr11:47279504..47279563,+!p1@NR1H3!0.89!15.94!NR1H3;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.89!7.21!GLIS1;;chr4:299227..299272,-!p1@ZNF732!0.89!6.83!ZNF732;;chr5:2751785..2751808,-!p2@IRX2!0.89!6.83!IRX2;;chr6:34204973..34204990,+!p4@HMGA1!0.88!93.35!HMGA1;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.59!OSR1;;chr6:1312325..1312340,+!p1@FOXQ1!0.88!11.00!FOXQ1;;chr6:50786571..50786590,+!p2@TFAP2B!0.87!6.45!TFAP2B;;chr8:60031809..60031835,-!p4@TOX!0.85!7.97!TOX;;chr17:41623075..41623101,-!p9@ETV4!0.85!7.21!ETV4;;chr15:67418119..67418162,+!p5@SMAD3!0.85!6.83!SMAD3;;chr12:85673977..85674015,+!p1@ALX1!0.85!6.07!ALX1;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!0.85!6.07!POU3F3;;chr20:42295745..42295765,+!p1@MYBL2!0.83!100.18!MYBL2;;chr17:59477197..59477212,+!p2@TBX2!0.83!10.25!TBX2;;chr5:3595961..3595975,+!p3@IRX1!0.83!5.69!IRX1;;chr7:19157043..19157088,-!p2@TWIST1!0.82!14.80!TWIST1;;chr16:54964740..54964789,+!p1@IRX5!0.82!8.35!IRX5;;chr11:113930425..113930471,+!p1@ZBTB16!0.82!8.35!ZBTB16;;chr6:31126291..31126399,+!p1@TCF19!0.81!55.40!TCF19;;chr2:121493425..121493474,+!p1@GLI2!0.81!12.52!GLI2;;chr12:53614115..53614154,-!p1@RARG!0.80!30.74!RARG;;chr11:63684602..63684664,-!p1@RCOR2!0.80!11.00!RCOR2;;chr16:54964899..54964914,+!p2@IRX5!0.80!5.31!IRX5;;chr17:17726907..17726958,-!p2@SREBF1!0.79!34.53!SREBF1;;chr11:65686952..65686975,+!p5@DRAP1!0.79!31.12!DRAP1;;chr1:164528445..164528459,+!p2@PBX1!0.79!17.46!PBX1;;chr7:44143978..44143989,+!p2@AEBP1!0.79!9.87!AEBP1;;chr4:4861385..4861398,+!p1@MSX1!0.78!15.94!MSX1;;chr5:134369905..134369972,-!p1@PITX1!0.78!7.97!PITX1;;chr3:185826855..185826911,-!p1@ETV5!0.77!148.75!ETV5;;chr1:8483878..8483907,-!p4@RERE!0.77!20.49!RERE;;chr12:66218378..66218401,+!p6@HMGA2!0.77!7.97!HMGA2;;chr10:119302232..119302265,+!p1@EMX2!0.77!4.93!EMX2;;chr1:170632250..170632277,+!p7@PRRX1!0.77!4.93!PRRX1;;chr17:41622982..41623001,-!p11@ETV4!0.77!4.93!ETV4;;chr8:60031619..60031676,-!p1@TOX!0.76!11.00!TOX;;chr12:66218443..66218461,+!p8@HMGA2!0.75!6.07!HMGA2;;chr5:92919068..92919082,+!p5@NR2F1!0.75!5.69!NR2F1;;chr11:46299186..46299195,+!p3@CREB3L1!0.75!5.31!CREB3L1;;chr11:65667846..65667868,-!p1@FOSL1!0.74!133.57!FOSL1;;chr3:12329397..12329433,+!p2@PPARG!0.74!11.00!PPARG;;chr5:134369879..134369898,-!p2@PITX1!0.74!4.55!PITX1;;chr6:34204672..34204692,+!p1@HMGA1!0.73!559.34!HMGA1;;chr17:70117153..70117174,+!p1@SOX9!0.73!50.85!SOX9;;chr17:1959369..1959388,+!p2@HIC1!0.73!12.52!HIC1;;chr16:73093174..73093209,-!p3@ZFHX3!0.73!6.07!ZFHX3;;chr12:66218836..66218888,+!p1@HMGA2!0.72!44.40!HMGA2;;chr19:49865646..49865718,-!p1@TEAD2!0.72!40.60!TEAD2;;chr5:176738887..176738934,-!p1@MXD3!0.72!31.88!MXD3;;chr3:12329358..12329393,+!p3@PPARG!0.72!11.38!PPARG;;chr6:10415276..10415341,-!p2@TFAP2A!0.72!5.31!TFAP2A;;chr15:83953397..83953425,-!p1@BNC1!0.72!4.93!BNC1;;chr1:170633262..170633285,+!p3@PRRX1!0.72!4.93!PRRX1;;chr12:66218152..66218174,+!p10@HMGA2!0.72!4.55!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.71!38.71!TBX3;;chr12:7079780..7079791,-!p2@PHB2!0.71!23.91!PHB2;;chr11:65667884..65667895,-!p2@FOSL1!0.71!17.84!FOSL1;;chr7:42276822..42276895,-!p2@GLI3!0.71!13.66!GLI3;;chr8:60031934..60031986,-!p6@TOX!0.71!4.17!TOX;;chr10:119302508..119302559,+!p5@EMX2!0.71!4.17!EMX2;;chr15:67418177..67418204,+!p9@SMAD3!0.71!4.17!SMAD3;;chr16:86600870..86600921,+!p2@FOXC2!0.71!4.17!FOXC2;;chr5:321810..321877,+!p1@AHRR!0.70!14.04!AHRR;;chr14:21994337..21994442,-!p1@SALL2!0.70!12.14!SALL2;;chr15:67418047..67418093,+!p4@SMAD3!0.70!5.31!SMAD3;;chr9:102584262..102584276,+!p1@NR4A3!0.69!9.49!NR4A3;;chr1:23857698..23857733,-!p1@E2F2!0.69!7.59!E2F2;;chrX:66763815..66763854,+!p2@AR!0.69!5.31!AR;;chr12:66218003..66218018,+!p9@HMGA2!0.69!4.93!HMGA2;;chr19:1592714..1592762,-!p1@MBD3!0.68!32.63!MBD3;;chr17:59477275..59477286,+!p3@TBX2!0.68!5.31!TBX2;;chr2:96012397..96012417,+!p3@KCNIP3!0.68!3.79!KCNIP3;;chr11:46299443..46299459,+!p4@CREB3L1!0.68!3.79!CREB3L1;;chr8:93074803..93074845,-!p1@RUNX1T1!0.68!3.79!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.68!3.79!RUNX1T1;;chr19:6424783..6424802,-!p2@KHSRP!0.67!86.90!KHSRP;;chr8:60031682..60031710,-!p2@TOX!0.67!6.45!TOX;;chr17:42295777..42295816,-!p7@UBTF!0.67!4.55!UBTF;;chr19:3366570..3366619,+!p1@NFIC!0.66!133.57!NFIC;;chr6:1610293..1610310,+!p1@FOXC1!0.66!6.45!FOXC1;;chr20:50721803..50721857,-!p2@ZFP64!0.66!6.07!ZFP64;;chr3:52001448..52001478,-!p2@PCBP4!0.65!56.92!PCBP4;;chr1:151032860..151032918,+!p1@MLLT11!0.65!47.81!MLLT11;;chr19:13134772..13134822,+!p2@NFIX!0.64!5.31!NFIX;;chr19:50542543..50542548,+!p2@ZNF473!0.64!3.42!ZNF473;;chr1:110613238..110613272,-!p1@ALX3!0.64!3.42!ALX3;;chr6:50786479..50786490,+!p6@TFAP2B!0.64!3.42!TFAP2B;;chr4:111558118..111558133,-!p5@PITX2!0.64!3.42!PITX2;;chr11:44331576..44331650,-!p1@ALX4!0.64!3.42!ALX4;;chr9:102584159..102584174,+!p2@NR4A3!0.63!6.45!NR4A3;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.91!HIC1;;chr12:53625966..53626012,-!p2@RARG!0.62!9.49!RARG;;chr11:65686802..65686818,+!p6@DRAP1!0.62!6.07!DRAP1;;chr17:41623667..41623682,-!p8@ETV4!0.62!3.42!ETV4;;chr19:6424813..6424835,-!p1@KHSRP!0.61!230.72!KHSRP;;chr16:4322832..4322907,-!p1@TFAP4!0.61!28.08!TFAP4;;chr5:92918894..92918912,+!p2@NR2F1!0.61!11.76!NR2F1;;chr7:42276787..42276815,-!p1@GLI3!0.61!9.49!GLI3;;chr5:92918768..92918783,+!p8@NR2F1!0.61!3.04!NR2F1;;chr6:10412576..10412599,-!p5@TFAP2A!0.61!3.04!TFAP2A;;chr6:41701581..41701613,-!p2@TFEB!0.61!3.04!TFEB;;chr16:86600458..86600461,+!p3@FOXC2!0.61!3.04!FOXC2;;chr17:8027418..8027432,-!p1@HES7!0.61!3.04!HES7;;chr19:58545454..58545498,+!p1@ZSCAN1!0.61!3.04!ZSCAN1;;chr10:119302645..119302712,+!p3@EMX2!0.61!3.04!EMX2;;chr10:119303078..119303169,+!p2@EMX2!0.61!3.04!EMX2;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.04!HMGA2;;chr12:85673868..85673881,+!p2@ALX1!0.61!3.04!ALX1;;chr14:64761083..64761101,-!p1@ESR2!0.61!3.04!ESR2;;chr17:42297226..42297246,-!p14@UBTF!0.60!4.55!UBTF;;chr9:77112244..77112262,+!p1@RORB!0.60!3.42!RORB;;chr8:48650715..48650735,-!p1@CEBPD!0.59!450.43!CEBPD;;chr6:34205372..34205412,+!p5@HMGA1!0.59!17.46!HMGA1;;chr19:1652555..1652568,-!p2@TCF3!0.59!14.04!TCF3;;chr6:10412392..10412409,-!p4@TFAP2A!0.59!3.42!TFAP2A;;chr19:1652575..1652621,-!p1@TCF3!0.58!130.92!TCF3;;chr19:3359591..3359667,+!p2@NFIC!0.58!39.09!NFIC;;chr20:306489..306564,+!p1@SOX12!0.58!37.19!SOX12;;chr7:14029283..14029311,-!p1@ETV1!0.58!18.21!ETV1;;chr1:247171316..247171336,-!p3@ZNF695!0.58!4.55!ZNF695;;chr19:49864746..49864780,-!p2@TEAD2!0.58!4.17!TEAD2;;chr1:8938736..8938756,-!p1@ENO1!0.57!3686.20!ENO1;;chr16:29817841..29817865,+!p1@MAZ!0.56!70.20!MAZ;;chr1:8763440..8763460,-!p2@RERE!0.56!16.32!RERE;;chr1:170632137..170632172,+!p10@PRRX1!0.56!2.66!PRRX1;;chr1:2985726..2985752,+!p2@PRDM16!0.56!2.66!PRDM16;;chr6:41701557..41701578,-!p3@TFEB!0.56!2.66!TFEB;;chr6:50789717..50789729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SMARCD3!0.36!3.79!SMARCD3;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!0.36!2.66!PCBP2;;chr2:85981222..85981259,+!p2@ATOH8!0.36!2.66!ATOH8;;chr16:29818199..29818216,+!p11@MAZ!0.36!2.66!MAZ;;chr11:45202580..45202606,+!p@chr11:45202580..45202606,+!0.36!1.90!PRDM11;;chr11:62369806..62369837,-!p8@MTA2!0.36!1.90!MTA2;;chr17:46622440..46622477,-!p5@HOXB2!0.36!1.52!HOXB2;;chr18:52989001..52989030,-!p10@TCF4!0.36!1.52!TCF4;;chr12:53845879..53845894,+!p1@PCBP2!0.35!1423.78!PCBP2;;chr22:41697520..41697613,+!p1@ZC3H7B!0.35!114.22!ZC3H7B;;chr7:150076406..150076456,+!p1@ZNF775!0.35!8.73!ZNF775;;chr16:2059797..2059837,-!p1@ZNF598!0.35!7.59!ZNF598;;chr19:45251805..45251840,+!p4@BCL3!0.35!5.69!BCL3;;chr16:29819446..29819471,+!p9@MAZ!0.35!5.31!MAZ;;chr19:19516507..19516539,+!p7@GATAD2A!0.35!5.31!GATAD2A;;chr6:45390025..45390076,+!p2@RUNX2!0.35!4.17!RUNX2;;chr18:56532100..56532130,+!p1@ZNF532!0.35!3.04!ZNF532;;chr20:32274150..32274166,-!p2@E2F1!0.35!3.04!E2F1;;chr1:221052700..221052730,+!p5@HLX!0.35!2.28!HLX;;chr7:137686552..137686564,-!p9@CREB3L2!0.35!2.28!CREB3L2;;chr6:43139126..43139137,+!p6@SRF!0.35!1.90!SRF;;chr11:6947720..6947812,+!p1@ZNF215!0.35!1.90!ZNF215;;chr11:47279248..47279264,+!p3@NR1H3!0.35!1.52!NR1H3;;chr3:185826286..185826318,-!p5@ETV5!0.35!1.52!ETV5;;chr19:3572925..3573014,+!p1@HMG20B!0.34!58.44!HMG20B;;chr2:27357479..27357524,-!p1@PREB!0.34!56.16!PREB;;chr17:17740287..17740307,-!p1@SREBF1!0.34!52.37!SREBF1;;chr19:42724436..42724507,+!p1@ZNF526!0.34!15.94!ZNF526;;chr6:33422343..33422394,+!p1@ZBTB9!0.34!12.90!ZBTB9;;chr19:56652643..56652683,+!p1@ZNF444!0.34!10.25!ZNF444;;chr16:31085514..31085576,-!p1@ZNF668!0.34!7.59!ZNF668;;chr8:145669791..145669834,-!p1@TONSL!0.34!4.93!TONSL;;chr1:8763296..8763339,-!p9@RERE!0.34!4.17!RERE;;chr1:26496459..26496470,+!p2@ZNF593!0.34!3.04!ZNF593;;chr12:3068501..3068515,+!p4@TEAD4!0.34!2.66!TEAD4;;chr10:114711019..114711041,+!p7@TCF7L2!0.34!2.28!TCF7L2;;chr9:102584241..102584261,+!p4@NR4A3!0.34!2.28!NR4A3;;chr17:41623259..41623278,-!p7@ETV4!0.34!1.52!ETV4;;chr17:46622229..46622257,-!p6@HOXB2!0.34!1.52!HOXB2;;chr13:114238997..114239077,+!p1@TFDP1!0.33!98.66!TFDP1;;chr4:2263809..2263854,-!p1@MXD4!0.33!74.00!MXD4;;chr19:1863568..1863586,-!p1@KLF16!0.33!63.37!KLF16;;chr19:6279932..6280000,-!p1@MLLT1!0.33!48.95!MLLT1;;chr8:49833978..49833996,-!p1@SNAI2!0.33!39.84!SNAI2;;chr16:67876180..67876242,+!p1@THAP11!0.33!31.88!THAP11;;chr19:17356697..17356762,-!p1@NR2F6!0.33!26.18!NR2F6;;chr1:164528410..164528428,+!p1@PBX1!0.33!14.04!PBX1;;chr19:21264991..21265026,+!p1@ZNF714!0.33!12.14!ZNF714;;chr1:151431647..151431669,-!p2@POGZ!0.33!8.73!POGZ;;chr19:58962974..58963001,+!p1@ZNF324B!0.33!7.97!ZNF324B;;chr14:73360799..73360817,-!p1@DPF3!0.33!6.07!DPF3;;chr2:74229812..74229867,+!p1@TET3!0.33!4.17!TET3;;chr16:3185125..3185173,+!p1@ZNF213!0.33!4.17!ZNF213;;chr6:144329500..144329526,-!p4@PLAGL1!0.33!3.79!PLAGL1;;chr19:47615426..47615439,-!p5@ZC3H4!0.33!3.79!ZC3H4;;chr17:40719073..40719080,+!p2@MLX!0.33!2.66!MLX;;chr19:11071630..11071644,+!p4@SMARCA4!0.33!2.28!SMARCA4;;chr3:33481687..33481713,-!p4@UBP1!0.33!2.28!UBP1;;chr1:221052840..221052875,+!p4@HLX!0.33!1.52!HLX;;chr12:115122005..115122016,-!p3@TBX3!0.33!1.52!TBX3;;chr10:119301928..119301955,+!p7@EMX2!0.33!1.14!EMX2;;chr10:119302150..119302163,+!p8@EMX2!0.33!1.14!EMX2;;chr11:125034586..125034604,+!p3@PKNOX2!0.33!1.14!PKNOX2;;chr11:46333934..46333963,+!p5@CREB3L1!0.33!1.14!CREB3L1;;chr11:46333979..46333991,+!p7@CREB3L1!0.33!1.14!CREB3L1;;chr11:47279167..47279178,+!p10@NR1H3!0.33!1.14!NR1H3;;chr12:57522813..57522825,-!p10@STAT6!0.33!1.14!STAT6;;chr12:66218923..66218934,+!p14@HMGA2!0.33!1.14!HMGA2;;chr14:29235961..29236008,+!p1@FOXG1!0.33!1.14!FOXG1;;chr19:9609272..9609297,-!p1@ZNF560!0.33!1.14!ZNF560;;chr1:164528866..164528877,+!p12@PBX1!0.33!1.14!PBX1;;chr1:164528942..164528964,+!p11@PBX1!0.33!1.14!PBX1;;chr1:164529004..164529015,+!p15@PBX1!0.33!1.14!PBX1;;chr1:170632115..170632136,+!p9@PRRX1!0.33!1.14!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.33!1.14!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.33!1.14!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.33!1.14!PRRX1;;chr1:25256439..25256476,-!p3@RUNX3!0.33!1.14!RUNX3;;chr20:55205825..55205847,+!p2@TFAP2C!0.33!1.14!TFAP2C;;chr21:38071430..38071456,+!p1@SIM2!0.33!1.14!SIM2;;chr2:102091566..102091581,-!p1@RFX8!0.33!1.14!RFX8;;chr2:95963052..95963106,+!p1@KCNIP3!0.33!1.14!KCNIP3;;chr2:96012757..96012779,+!p8@KCNIP3!0.33!1.14!KCNIP3;;chr3:138665969..138665993,-!p2@FOXL2!0.33!1.14!FOXL2;;chr15:57511589..57511608,+!p4@TCF12!0.33!1.14!TCF12;;chr15:67418099..67418118,+!p16@SMAD3!0.33!1.14!SMAD3;;chr15:67458491..67458505,+!p18@SMAD3!0.33!1.14!SMAD3;;chr16:54320280..54320291,-!p9@IRX3!0.33!1.14!IRX3;;chr16:86601088..86601105,+!p5@FOXC2!0.33!1.14!FOXC2;;chr16:86612149..86612161,+!p2@FOXL1!0.33!1.14!FOXL1;;chr16:86612174..86612188,+!p4@FOXL1!0.33!1.14!FOXL1;;chr17:41623716..41623727,-!p12@ETV4!0.33!1.14!ETV4;;chr17:59477266..59477273,+!p6@TBX2!0.33!1.14!TBX2;;chr17:7387486..7387497,-!p11@ZBTB4!0.33!1.14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FF:11532-120A2: Difference between revisions

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Revision as of 18:04, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0