FF:13163-141B4: Difference between revisions

Revision as of 18:30, 29 June 2012

Name:	MCF7 breast cancer cell line response to EGF1, 00hr00min, biol_rep3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	breast
dev stage	NA
sex	female
age	NA
cell type	mammary gland epithelial cell
cell line	MCF7
company	NA
collaboration	Mariko Okada Hatakeyama (RIKEN RCAI)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	Repurified by minelute

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0113
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.231
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.185
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	1.259
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.406
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.567
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.269
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.896
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0.647
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.269
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.579
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0636
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12703

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0656
MA0003.1	MA0003.1	0.701
MA0004.1	MA0004.1	0.0259
MA0006.1	MA0006.1	0.648
MA0007.1	MA0007.1	0.796
MA0009.1	MA0009.1	0.595
MA0014.1	MA0014.1	0.073
MA0017.1	MA0017.1	0.229
MA0018.2	MA0018.2	0.421
MA0019.1	MA0019.1	0.0673
MA0024.1	MA0024.1	9.00929e-4
MA0025.1	MA0025.1	0.111
MA0027.1	MA0027.1	0.864
MA0028.1	MA0028.1	2.49865e-5
MA0029.1	MA0029.1	0.0779
MA0030.1	MA0030.1	0.0479
MA0031.1	MA0031.1	0.168
MA0035.2	MA0035.2	0.165
MA0038.1	MA0038.1	8.42852e-5
MA0039.2	MA0039.2	5.60138e-4
MA0040.1	MA0040.1	0.745
MA0041.1	MA0041.1	0.325
MA0042.1	MA0042.1	0.751
MA0043.1	MA0043.1	0.124
MA0046.1	MA0046.1	0.0976
MA0047.2	MA0047.2	0.0245
MA0048.1	MA0048.1	0.347
MA0050.1	MA0050.1	1.16822e-4
MA0051.1	MA0051.1	0.0175
MA0052.1	MA0052.1	0.786
MA0055.1	MA0055.1	0.0176
MA0057.1	MA0057.1	0.951
MA0058.1	MA0058.1	0.0136
MA0059.1	MA0059.1	0.618
MA0060.1	MA0060.1	2.98229e-32
MA0061.1	MA0061.1	0.0018
MA0062.2	MA0062.2	2.24424e-7
MA0065.2	MA0065.2	0.738
MA0066.1	MA0066.1	0.58
MA0067.1	MA0067.1	0.083
MA0068.1	MA0068.1	0.66
MA0069.1	MA0069.1	0.663
MA0070.1	MA0070.1	0.035
MA0071.1	MA0071.1	0.879
MA0072.1	MA0072.1	0.415
MA0073.1	MA0073.1	0.981
MA0074.1	MA0074.1	0.932
MA0076.1	MA0076.1	2.2941e-5
MA0077.1	MA0077.1	0.543
MA0078.1	MA0078.1	0.265
MA0079.2	MA0079.2	0.391
MA0080.2	MA0080.2	7.31334e-6
MA0081.1	MA0081.1	0.775
MA0083.1	MA0083.1	0.58
MA0084.1	MA0084.1	0.397
MA0087.1	MA0087.1	0.682
MA0088.1	MA0088.1	0.631
MA0090.1	MA0090.1	0.813
MA0091.1	MA0091.1	0.126
MA0092.1	MA0092.1	0.526
MA0093.1	MA0093.1	0.0161
MA0099.2	MA0099.2	0.109
MA0100.1	MA0100.1	0.189
MA0101.1	MA0101.1	0.19
MA0102.2	MA0102.2	0.00296
MA0103.1	MA0103.1	5.03091e-6
MA0104.2	MA0104.2	0.103
MA0105.1	MA0105.1	4.64729e-5
MA0106.1	MA0106.1	0.251
MA0107.1	MA0107.1	0.0523
MA0108.2	MA0108.2	0.00583
MA0111.1	MA0111.1	0.416
MA0112.2	MA0112.2	0.812
MA0113.1	MA0113.1	0.237
MA0114.1	MA0114.1	0.94
MA0115.1	MA0115.1	0.701
MA0116.1	MA0116.1	0.00399
MA0117.1	MA0117.1	0.267
MA0119.1	MA0119.1	0.103
MA0122.1	MA0122.1	0.147
MA0124.1	MA0124.1	0.129
MA0125.1	MA0125.1	6.99582e-4
MA0131.1	MA0131.1	0.0669
MA0135.1	MA0135.1	0.0371
MA0136.1	MA0136.1	0.0946
MA0137.2	MA0137.2	0.343
MA0138.2	MA0138.2	0.362
MA0139.1	MA0139.1	0.409
MA0140.1	MA0140.1	0.354
MA0141.1	MA0141.1	0.474
MA0142.1	MA0142.1	0.995
MA0143.1	MA0143.1	0.0655
MA0144.1	MA0144.1	0.114
MA0145.1	MA0145.1	0.984
MA0146.1	MA0146.1	0.147
MA0147.1	MA0147.1	0.171
MA0148.1	MA0148.1	0.0955
MA0149.1	MA0149.1	0.136
MA0150.1	MA0150.1	0.0362
MA0152.1	MA0152.1	0.45
MA0153.1	MA0153.1	0.196
MA0154.1	MA0154.1	0.0701
MA0155.1	MA0155.1	0.754
MA0156.1	MA0156.1	0.42
MA0157.1	MA0157.1	0.545
MA0159.1	MA0159.1	0.568
MA0160.1	MA0160.1	0.785
MA0162.1	MA0162.1	0.458
MA0163.1	MA0163.1	0.00351
MA0164.1	MA0164.1	0.699
MA0258.1	MA0258.1	0.797
MA0259.1	MA0259.1	0.0631

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12703

Novel motif	Logo	P-value
1	1	0.132
10	10	0.545
100	100	0.668
101	101	0.09
102	102	0.263
103	103	0.102
104	104	0.933
105	105	0.346
106	106	0.0153
107	107	0.0313
108	108	0.833
109	109	0.0507
11	11	0.441
110	110	0.688
111	111	0.0163
112	112	0.2
113	113	0.0976
114	114	0.0445
115	115	0.146
116	116	0.338
117	117	0.423
118	118	0.605
119	119	0.38
12	12	0.482
120	120	0.569
121	121	0.891
122	122	0.169
123	123	0.0115
124	124	0.34
125	125	0.345
126	126	0.815
127	127	0.69
128	128	0.0159
129	129	0.945
13	13	0.494
130	130	0.00576
131	131	0.221
132	132	0.511
133	133	0.00803
134	134	0.0719
135	135	0.356
136	136	0.00139
137	137	0.0976
138	138	0.15
139	139	0.133
14	14	0.875
140	140	0.0583
141	141	0.834
142	142	0.253
143	143	0.0932
144	144	0.413
145	145	0.163
146	146	0.57
147	147	0.906
148	148	0.0013
149	149	0.158
15	15	0.369
150	150	0.79
151	151	0.0488
152	152	0.524
153	153	0.105
154	154	0.195
155	155	0.0804
156	156	0.899
157	157	0.271
158	158	0.292
159	159	0.885
16	16	0.482
160	160	0.805
161	161	0.611
162	162	0.943
163	163	0.707
164	164	0.426
165	165	0.178
166	166	0.0752
167	167	0.605
168	168	0.25
169	169	0.701
17	17	0.655
18	18	0.0802
19	19	0.312
2	2	0.553
20	20	0.392
21	21	0.217
22	22	0.598
23	23	0.00221
24	24	0.976
25	25	0.802
26	26	0.438
27	27	0.689
28	28	0.911
29	29	0.714
3	3	0.0659
30	30	0.412
31	31	0.524
32	32	0.091
33	33	0.3
34	34	0.274
35	35	0.0343
36	36	0.394
37	37	0.17
38	38	0.933
39	39	0.333
4	4	0.379
40	40	0.257
41	41	0.22
42	42	0.301
43	43	0.0841
44	44	0.283
45	45	0.766
46	46	0.169
47	47	0.667
48	48	0.974
49	49	0.128
5	5	0.178
50	50	0.515
51	51	0.76
52	52	0.318
53	53	0.112
54	54	0.582
55	55	0.409
56	56	0.701
57	57	0.306
58	58	0.405
59	59	0.539
6	6	0.716
60	60	0.0461
61	61	0.548
62	62	0.142
63	63	0.204
64	64	0.807
65	65	0.158
66	66	0.00301
67	67	0.495
68	68	0.737
69	69	0.327
7	7	0.939
70	70	0.0908
71	71	0.414
72	72	0.519
73	73	0.98
74	74	0.0223
75	75	0.823
76	76	0.69
77	77	0.215
78	78	0.96
79	79	0.262
8	8	0.471
80	80	0.0681
81	81	0.111
82	82	0.287
83	83	0.167
84	84	0.654
85	85	0.0712
86	86	0.572
87	87	0.00198
88	88	0.975
89	89	0.0863
9	9	0.181
90	90	1.81959e-5
91	91	0.0698
92	92	0.0433
93	93	0.578
94	94	0.122
95	95	0.0157
96	96	0.171
97	97	0.898
98	98	0.411
99	99	0.956

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12703

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000426 human MCF7 breast cancer cell line 0min after EGF1 treatment sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
5093 (thoracic cancer)
305 (carcinoma)
299 (adenocarcinoma)
1612 (breast cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000310 (breast)
0002100 (trunk)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0009569 (subdivision of trunk)
0001443 (chest)
0000915 (thoracic segment of trunk)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr10:8096631..8096660,+!p1@GATA3!2.81!763.19!GATA3;;chr14:38064429..38064486,-!p1@FOXA1!2.59!383.74!FOXA1;;chr6:34524093..34524135,-!p1@SPDEF!2.39!245.53!SPDEF;;chr20:55204351..55204377,+!p1@TFAP2C!2.13!167.40!TFAP2C;;chr1:201979743..201979762,+!p1@ELF3!1.96!90.14!ELF3;;chr10:8096772..8096787,+!p2@GATA3!1.91!93.57!GATA3;;chr17:59477233..59477263,+!p1@TBX2!1.73!157.96!TBX2;;chr22:29196433..29196445,-!p4@XBP1!1.66!48.93!XBP1;;chr8:102504651..102504683,+!p1@GRHL2!1.63!42.07!GRHL2;;chr17:59477197..59477212,+!p2@TBX2!1.56!59.24!TBX2;;chr5:2751762..2751784,-!p1@IRX2!1.53!32.62!IRX2;;chr10:8095593..8095625,+!p3@GATA3!1.50!36.06!GATA3;;chr6:152128810..152128827,+!p2@ESR1!1.50!30.91!ESR1;;chr22:29196492..29196503,-!p3@XBP1!1.49!45.50!XBP1;;chr10:8097321..8097348,+!p4@GATA3!1.44!26.61!GATA3;;chr10:8100691..8100732,+!p5@GATA3!1.43!25.75!GATA3;;chr14:37131058..37131139,+!p1@PAX9!1.43!25.75!PAX9;;chr3:147111198..147111225,+!p4@ZIC1!1.43!25.75!ZIC1;;chr6:126070769..126070801,+!p1@HEY2!1.42!29.19!HEY2;;chr15:96869511..96869525,+!p16@NR2F2!1.40!26.61!NR2F2;;chr8:99956662..99956684,+!p1@OSR2!1.39!36.06!OSR2;;chr8:102504979..102505010,+!p2@GRHL2!1.37!22.32!GRHL2;;chr9:129376233..129376251,+!p2@LMX1B!1.37!22.32!LMX1B;;chr22:29196547..29196563,-!p2@XBP1!1.34!740.87!XBP1;;chr20:50159198..50159299,-!p1@NFATC2!1.30!27.47!NFATC2;;chr12:53625966..53626012,-!p2@RARG!1.27!46.36!RARG;;chr11:65554528..65554546,+!p1@OVOL1!1.26!17.17!OVOL1;;chr3:147111231..147111281,+!p3@ZIC1!1.26!17.17!ZIC1;;chr17:59477403..59477414,+!p4@TBX2!1.26!17.17!TBX2;;chr5:174151553..174151610,+!p1@MSX2!1.25!27.47!MSX2;;chr19:45579725..45579743,-!p1@ZNF296!1.24!72.97!ZNF296;;chr14:75988771..75988826,+!p1@BATF!1.23!21.46!BATF;;chr6:135502501..135502546,+!p1@MYB!1.22!18.89!MYB;;chr14:38064307..38064323,-!p3@FOXA1!1.22!15.45!FOXA1;;chr14:38064590..38064606,-!p2@FOXA1!1.22!15.45!FOXA1;;chr20:46130619..46130664,+!p1@NCOA3!1.20!397.48!NCOA3;;chr9:129376201..129376225,+!p1@LMX1B!1.19!14.59!LMX1B;;chr16:29818199..29818216,+!p11@MAZ!1.18!23.18!MAZ;;chr8:102504690..102504704,+!p3@GRHL2!1.17!13.74!GRHL2;;chr10:8097295..8097320,+!p6@GATA3!1.17!13.74!GATA3;;chr14:38064495..38064506,-!p4@FOXA1!1.17!13.74!FOXA1;;chr11:65554563..65554576,+!p2@OVOL1!1.14!12.88!OVOL1;;chr5:2751785..2751808,-!p2@IRX2!1.14!12.88!IRX2;;chr20:42295745..42295765,+!p1@MYBL2!1.13!202.60!MYBL2;;chr6:10415276..10415341,-!p2@TFAP2A!1.13!15.45!TFAP2A;;chr12:54332608..54332636,+!p1@HOXC13!1.11!12.02!HOXC13;;chr16:54964740..54964789,+!p1@IRX5!1.09!16.31!IRX5;;chr1:201979703..201979721,+!p2@ELF3!1.08!11.16!ELF3;;chr20:52210553..52210568,-!p7@ZNF217!1.08!11.16!ZNF217;;chr1:935398..935465,-!p2@HES4!1.05!21.46!HES4;;chr14:105267423..105267443,+!p2@ZBTB42!1.05!10.30!ZBTB42;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.05!10.30!ZBED1;;chr14:95236551..95236576,-!p2@GSC!1.05!10.30!GSC;;chr8:22550982..22550999,-!p1@EGR3!1.04!28.33!EGR3;;chr17:59477275..59477286,+!p3@TBX2!1.03!12.88!TBX2;;chr16:29818160..29818188,+!p6@MAZ!1.02!44.64!MAZ;;chr5:174151612..174151633,+!p2@MSX2!1.02!9.44!MSX2;;chr6:152128782..152128803,+!p5@ESR1!1.02!9.44!ESR1;;chr10:48355030..48355090,+!p1@ZNF488!1.01!12.02!ZNF488;;chr1:149858461..149858479,+!p1@BOLA1!0.98!3417.63!BOLA1;;chr17:61920023..61920110,-!p1@SMARCD2!0.98!121.91!SMARCD2;;chr3:128206762..128206781,-!p2@GATA2!0.98!54.08!GATA2;;chr15:67418177..67418204,+!p9@SMAD3!0.98!8.58!SMAD3;;chr10:135122906..135122921,+!p4@ZNF511!0.98!8.58!ZNF511;;chr14:38065203..38065215,-!p9@FOXA1!0.98!8.58!FOXA1;;chr7:156803329..156803362,-!p1@MNX1!0.98!8.58!MNX1;;chr1:23857698..23857733,-!p1@E2F2!0.97!15.45!E2F2;;chr1:209979467..209979494,-!p1@IRF6!0.97!9.44!IRF6;;chr5:176738887..176738934,-!p1@MXD3!0.96!55.80!MXD3;;chr19:48774586..48774670,+!p1@ZNF114!0.96!10.30!ZNF114;;chr8:116681409..116681431,-!p2@TRPS1!0.95!22.32!TRPS1;;chr8:37553292..37553317,+!p1@ZNF703!0.94!188.87!ZNF703;;chr17:17726907..17726958,-!p2@SREBF1!0.94!49.79!SREBF1;;chr15:67418119..67418162,+!p5@SMAD3!0.94!8.58!SMAD3;;chr20:18038521..18038571,-!p1@OVOL2!0.94!7.73!OVOL2;;chr17:61919985..61920012,-!p3@SMARCD2!0.93!18.89!SMARCD2;;chr8:125985531..125985571,+!p1@ZNF572!0.93!15.45!ZNF572;;chr2:157199008..157199023,-!p3@NR4A2!0.91!15.45!NR4A2;;chr2:71127699..71127744,+!p1@VAX2!0.90!14.59!VAX2;;chr6:10413188..10413249,-!p7@TFAP2A!0.90!6.87!TFAP2A;;chr6:152011654..152011682,+!p1@ESR1!0.90!6.87!ESR1;;chr6:152126830..152126847,+!p4@ESR1!0.90!6.87!ESR1;;chr14:95236440..95236465,-!p1@GSC!0.90!6.87!GSC;;chr19:33793430..33793447,-!p1@CEBPA!0.89!30.05!CEBPA;;chr20:46130602..46130613,+!p3@NCOA3!0.89!20.60!NCOA3;;chr15:67418047..67418093,+!p4@SMAD3!0.89!8.58!SMAD3;;chr6:10412392..10412409,-!p4@TFAP2A!0.89!7.73!TFAP2A;;chr9:110252035..110252057,-!p1@KLF4!0.88!110.74!KLF4;;chr7:149470641..149470694,-!p1@ZNF467!0.86!30.05!ZNF467;;chr11:47236584..47236679,+!p1@DDB2!0.85!70.40!DDB2;;chr6:34524049..34524089,-!p2@SPDEF!0.85!6.01!SPDEF;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!0.85!6.01!EN2;;chr17:80797886..80797906,-!p1@ZNF750!0.85!6.01!ZNF750;;chr20:46130672..46130686,+!p2@NCOA3!0.83!27.47!NCOA3;;chr14:69262789..69262822,-!p2@ZFP36L1!0.82!15.45!ZFP36L1;;chr19:44764031..44764072,+!p1@ZNF233!0.81!6.87!ZNF233;;chr19:49140609..49140643,-!p1@DBP!0.80!32.62!DBP;;chr12:80084737..80084763,-!p3@PAWR!0.80!21.46!PAWR;;chr1:149871171..149871192,+!p4@BOLA1!0.80!12.88!BOLA1;;chr16:29818132..29818144,+!p12@MAZ!0.80!11.16!MAZ;;chr17:61919812..61919833,-!p6@SMARCD2!0.80!6.87!SMARCD2;;chr20:39317868..39317884,-!p1@MAFB!0.79!66.96!MAFB;;chr20:55205791..55205817,+!p3@TFAP2C!0.79!5.15!TFAP2C;;chr10:135122868..135122893,+!p3@ZNF511!0.79!5.15!ZNF511;;chr14:38064536..38064550,-!p7@FOXA1!0.79!5.15!FOXA1;;chr3:181429741..181429767,+!p2@SOX2!0.79!5.15!SOX2;;chr6:135502472..135502489,+!p3@MYB!0.79!5.15!MYB;;chr6:152011695..152011709,+!p6@ESR1!0.79!5.15!ESR1;;chr6:34524025..34524045,-!p3@SPDEF!0.79!5.15!SPDEF;;chr3:150126101..150126118,+!p6@TSC22D2!0.78!8.58!TSC22D2;;chr19:17356189..17356221,-!p2@NR2F6!0.78!8.58!NR2F6;;chr1:154975258..154975330,+!p1@ZBTB7B!0.77!19.75!ZBTB7B;;chr17:7388010..7388017,-!p5@ZBTB4!0.77!8.58!ZBTB4;;chr6:10412600..10412637,-!p1@TFAP2A!0.77!8.58!TFAP2A;;chr1:41827095..41827155,+!p1@FOXO6!0.77!6.87!FOXO6;;chr11:120107344..120107351,+!p1@POU2F3!0.77!6.01!POU2F3;;chr2:172967621..172967637,-!p1@DLX2!0.76!13.74!DLX2;;chr17:38465413..38465438,+!p5@RARA!0.75!7.73!RARA;;chr8:81397820..81397836,+!p2@ZBTB10!0.75!6.01!ZBTB10;;chr8:81397846..81397860,+!p3@ZBTB10!0.75!6.01!ZBTB10;;chr8:37553261..37553282,+!p2@ZNF703!0.74!37.77!ZNF703;;chr2:239148671..239148686,-!p1@HES6!0.74!18.03!HES6;;chr6:41040923..41040952,+!p2@NFYA!0.74!12.88!NFYA;;chr1:151254738..151254787,+!p1@ZNF687!0.73!45.50!ZNF687;;chr14:64971288..64971316,-!p2@ZBTB25!0.73!14.59!ZBTB25;;chr9:137217986..137218049,+!p3@RXRA!0.73!13.74!RXRA;;chr18:3449330..3449344,+!p10@TGIF1!0.73!6.01!TGIF1;;chr17:48072574..48072597,-!p1@DLX3!0.72!4.29!DLX3;;chr9:126774018..126774055,+!p1@LHX2!0.72!4.29!LHX2;;chr3:181429704..181429722,+!p1@SOX2!0.72!4.29!SOX2;;chr6:126070748..126070768,+!p2@HEY2!0.72!4.29!HEY2;;chr6:135513595..135513617,+!p4@MYB!0.72!4.29!MYB;;chr10:8100452..8100463,+!p20@GATA3!0.72!4.29!GATA3;;chr11:101000445..101000465,-!p5@PGR!0.72!4.29!PGR;;chr11:129245526..129245553,+!p1@BARX2!0.72!4.29!BARX2;;chr1:10856694..10856715,-!p3@CASZ1!0.72!4.29!CASZ1;;chr1:151804244..151804310,-!p1@RORC!0.72!4.29!RORC;;chr1:154975229..154975247,+!p6@ZBTB7B!0.72!4.29!ZBTB7B;;chr20:18037473..18037494,-!p3@OVOL2!0.72!4.29!OVOL2;;chr20:55205825..55205847,+!p2@TFAP2C!0.72!4.29!TFAP2C;;chr20:62601243..62601291,-!p1@ZNF512B!0.71!45.50!ZNF512B;;chr6:20402102..20402152,+!p1@E2F3!0.71!18.89!E2F3;;chr11:47270436..47270464,+!p2@NR1H3!0.71!9.44!NR1H3;;chr17:42299455..42299485,-!p12@UBTF!0.71!6.01!UBTF;;chr11:62521614..62521646,-!p1@ZBTB3!0.70!23.18!ZBTB3;;chr19:12721513..12721572,-!p1@ZNF490!0.70!18.89!ZNF490;;chr19:12551785..12551823,-!p1@ZNF443!0.70!6.87!ZNF443;;chr15:96876966..96877017,+!p12@NR2F2!0.70!6.01!NR2F2;;chr17:38465441..38465481,+!p6@RARA!0.70!5.15!RARA;;chr1:202777535..202777556,-!p1@KDM5B!0.68!146.80!KDM5B;;chr13:41593425..41593480,-!p1@ELF1!0.68!27.47!ELF1;;chr8:67525443..67525459,-!p2@MYBL1!0.68!6.01!MYBL1;;chr16:88519669..88519726,+!p1@ZFPM1!0.67!37.77!ZFPM1;;chr19:12551824..12551846,-!p2@ZNF443!0.67!5.15!ZNF443;;chr20:46130727..46130734,+!p4@NCOA3!0.67!5.15!NCOA3;;chr2:10091815..10091864,+!p1@GRHL1!0.67!5.15!GRHL1;;chr22:31742303..31742350,-!p1@PATZ1!0.66!45.50!PATZ1;;chr6:15246200..15246214,+!p2@JARID2!0.66!11.16!JARID2;;chr6:135502408..135502459,+!p2@MYB!0.66!4.29!MYB;;chr6:21593973..21593988,+!p1@SOX4!0.65!145.08!SOX4;;chr20:48807875..48807982,+!p2@CEBPB!0.65!89.28!CEBPB;;chr19:42580274..42580375,+!p1@ZNF574!0.65!46.36!ZNF574;;chr12:2986275..2986363,-!p1@FOXM1!0.65!40.35!FOXM1;;chr20:32274179..32274213,-!p1@E2F1!0.65!26.61!E2F1;;chr19:12146483..12146546,-!p1@ZNF433!0.65!14.59!ZNF433;;chr8:145669791..145669834,-!p1@TONSL!0.65!11.16!TONSL;;chr5:169532896..169532904,+!p1@FOXI1!0.65!3.43!FOXI1;;chr6:152129265..152129276,+!p13@ESR1!0.65!3.43!ESR1;;chr6:152130240..152130274,+!p9@ESR1!0.65!3.43!ESR1;;chr7:101917407..101917443,+!p3@CUX1!0.65!3.43!CUX1;;chr7:101917447..101917479,+!p4@CUX1!0.65!3.43!CUX1;;chr7:27190547..27190591,-!p1@HOXA6!0.65!3.43!HOXA6;;chr7:73038839..73038862,-!p1@MLXIPL!0.65!3.43!MLXIPL;;chr8:144512897..144512903,-!p1@MAFA!0.65!3.43!MAFA;;chr15:96880438..96880445,+!p23@NR2F2!0.65!3.43!NR2F2;;chr17:80797863..80797874,-!p2@ZNF750!0.65!3.43!ZNF750;;chr19:3574330..3574393,+!p2@HMG20B!0.65!3.43!HMG20B;;chr1:3569072..3569093,+!p1@TP73!0.65!3.43!TP73;;chr1:3569135..3569150,+!p3@TP73!0.65!3.43!TP73;;chr20:18038486..18038520,-!p2@OVOL2!0.65!3.43!OVOL2;;chr21:38071430..38071456,+!p1@SIM2!0.65!3.43!SIM2;;chr10:8097357..8097368,+!p15@GATA3!0.65!3.43!GATA3;;chr11:101000537..101000553,-!p1@PGR!0.65!3.43!PGR;;chr12:53625846..53625861,-!p6@RARG!0.65!3.43!RARG;;chr12:54393880..54393962,+!p1@HOXC9!0.65!3.43!HOXC9;;chr2:238592039..238592054,+!p4@LRRFIP1!0.65!3.43!LRRFIP1;;chr3:128207349..128207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FF:13163-141B4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:30, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0