FFCP PHASE1:Hg19::chr1:230883128..230883162,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.91e-08;1 | |ontology_enrichment_celltype_v019=CL:0000313;1.91e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.22e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.73e-09;1!UBERON:0001045;1.27e-08;1!UBERON:0005425;1.91e-08;1!UBERON:0006595;1.90e-07;86 | |ontology_enrichment_development_v019=UBERON:0006242;9.73e-09;1!UBERON:0001045;1.27e-08;1!UBERON:0005425;1.91e-08;1!UBERON:0006595;1.90e-07;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.59e-08;4!DOID:1612;1.59e-08;4!DOID:2152;1.91e-08;1 | |ontology_enrichment_disease_v019=DOID:5093;1.59e-08;4!DOID:1612;1.59e-08;4!DOID:2152;1.91e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.53e-08,4;DOID:1612,1.53e-08,4;DOID:2152,2.22e-08,1 | |||
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| ||
|short_description=p1@CAPN9 | |short_description=p1@CAPN9 | ||
}} | }} |
Revision as of 16:53, 15 November 2012
Short description: | p1@CAPN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CAPN9_5end |
Coexpression cluster: | C3948_stomach_colon_temporal_MCF7_rectum_duodenum_small |
Association with transcript: | 0bp_to_ENST00000271971, ENST00000354537, NM_006615, NM_016452, uc001htz.1, uc001hua.1, uc009xfg.1_5end |
EntrezGene: | CAPN9 |
HGNC: | 1486 |
UniProt: | O14815Q6PIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.05e-27 | 25 |
intestine | 1.03e-25 | 17 |
large intestine | 4.83e-17 | 11 |
open tracheal system trachea | 9.16e-16 | 2 |
subdivision of digestive tract | 7.59e-15 | 118 |
small intestine | 3.35e-14 | 4 |
colon | 1.45e-13 | 9 |
digestive system | 4.10e-13 | 145 |
digestive tract | 4.10e-13 | 145 |
primitive gut | 4.10e-13 | 145 |
endoderm-derived structure | 1.42e-11 | 160 |
endoderm | 1.42e-11 | 160 |
presumptive endoderm | 1.42e-11 | 160 |
lower lobe of right lung | 5.70e-09 | 1 |
right lung lobe | 5.70e-09 | 1 |
lower lobe of lung | 5.70e-09 | 1 |
lobe of lung | 5.70e-09 | 1 |
right lung | 5.70e-09 | 1 |
tonsil | 1.22e-08 | 1 |
mucosa-associated lymphoid tissue | 1.22e-08 | 1 |
lymphoid tissue | 1.22e-08 | 1 |
tonsillar ring | 1.22e-08 | 1 |
vermiform appendix | 1.42e-08 | 1 |
caecum | 1.42e-08 | 1 |
midgut | 1.42e-08 | 1 |
cranial nerve II | 1.78e-08 | 1 |
cranial nerve | 1.78e-08 | 1 |
nerve trunk | 1.78e-08 | 1 |
nerve connecting eye with brain | 1.78e-08 | 1 |
nerve | 1.78e-08 | 1 |
retinal neural layer | 1.78e-08 | 1 |
presumptive neural retina | 1.78e-08 | 1 |
epithelium of female gonad | 2.22e-08 | 1 |
organ system subdivision | 2.87e-08 | 223 |
adult organism | 4.17e-07 | 114 |
lower digestive tract | 6.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.53e-08 | 4 |
breast cancer | 1.53e-08 | 4 |
ovary epithelial cancer | 2.22e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.