FFCP PHASE1:Hg19::chr22:39640227..39640240,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.24e-30!254;CL:0000076!4.13e-13!62;CL:0000213!1.53e-12!57;CL:0000215!1.53e-12!57;CL:1000449!3.68e-11!16;CL:1000497!1.05e-10!18;CL:0002518!1.05e-10!18;CL:0002078!1.88e-10!44;CL:1000507!7.91e-10!12;CL:1000494!7.91e-10!12;CL:0000115!1.22e-09!35;CL:0002139!7.20e-09!24;CL:0002681!1.31e-08!13;CL:0002584!1.31e-08!13;CL:0000071!9.21e-07!18;CL:0002546!9.21e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.24e-30!254;CL:0000076!4.13e-13!62;CL:0000213!1.53e-12!57;CL:0000215!1.53e-12!57;CL:1000449!3.68e-11!16;CL:1000497!1.05e-10!18;CL:0002518!1.05e-10!18;CL:0002078!1.88e-10!44;CL:1000507!7.91e-10!12;CL:1000494!7.91e-10!12;CL:0000115!1.22e-09!35;CL:0002139!7.20e-09!24;CL:0002681!1.31e-08!13;CL:0002584!1.31e-08!13;CL:0000071!9.21e-07!18;CL:0002546!9.21e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.49e-25;15!CL:1000497;5.60e-22;17!CL:0002518;5.60e-22;17!CL:0002681;4.28e-20;12!CL:0002584;4.28e-20;12!CL:1000507;3.28e-19;10!CL:1000494;3.28e-19;10!CL:1000746;1.73e-14;7!CL:1000612;1.73e-14;7!CL:0000239;3.64e-12;3!CL:1000615;3.64e-12;3!CL:0002306;3.64e-12;3!CL:0002078;9.50e-10;45!CL:0000650;1.72e-09;2!CL:1000500;1.72e-09;2!CL:1000618;1.72e-09;2!CL:1001318;1.72e-09;2!CL:0002173;1.72e-09;2!CL:0000115;7.74e-09;36!CL:0002536;1.13e-08;2!CL:0002188;9.31e-08;5!CL:0000071;4.07e-07;18!CL:1000413;5.41e-07;9!CL:0002139;6.29e-07;24 | |ontology_enrichment_celltype_v019=CL:1000449;3.49e-25;15!CL:1000497;5.60e-22;17!CL:0002518;5.60e-22;17!CL:0002681;4.28e-20;12!CL:0002584;4.28e-20;12!CL:1000507;3.28e-19;10!CL:1000494;3.28e-19;10!CL:1000746;1.73e-14;7!CL:1000612;1.73e-14;7!CL:0000239;3.64e-12;3!CL:1000615;3.64e-12;3!CL:0002306;3.64e-12;3!CL:0002078;9.50e-10;45!CL:0000650;1.72e-09;2!CL:1000500;1.72e-09;2!CL:1000618;1.72e-09;2!CL:1001318;1.72e-09;2!CL:0002173;1.72e-09;2!CL:0000115;7.74e-09;36!CL:0002536;1.13e-08;2!CL:0002188;9.31e-08;5!CL:0000071;4.07e-07;18!CL:1000413;5.41e-07;9!CL:0002139;6.29e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.96e-25,15;CL:1000497,7.62e-22,17;CL:0002518,7.62e-22,17;CL:0002681,6.19e-20,12;CL:0002584,6.19e-20,12;CL:1000507,2.07e-19,10;CL:1000494,2.07e-19,10;CL:0000066,4.73e-17,253;CL:1000746,4.05e-14,7;CL:1000612,4.05e-14,7;CL:0002078,1.18e-13,45;CL:0000239,1.94e-12,3;CL:1000615,1.94e-12,3;CL:0002306,1.94e-12,3;CL:0000115,1.01e-10,36;CL:0000650,1.74e-09,2;CL:1000500,1.74e-09,2;CL:1000618,1.74e-09,2;CL:1001318,1.74e-09,2;CL:0002173,1.74e-09,2;CL:0002536,6.59e-09,2;CL:0000213,2.00e-08,58;CL:0000215,2.00e-08,58;CL:0002188,1.86e-07,5;CL:0000071,3.09e-07,18;CL:0002546,3.09e-07,18;CL:0002139,5.65e-07,24;CL:1000413,6.62e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.07e-07;18 | |ontology_enrichment_development_v019=CL:0002546;4.07e-07;18 | ||
|ontology_enrichment_disease=DOID:305!6.03e-10!106;DOID:0050687!5.07e-07!143 | |ontology_enrichment_disease=DOID:305!6.03e-10!106;DOID:0050687!5.07e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!5.47e-12!286;UBERON:0006555!1.28e-11!17;UBERON:0005103!1.28e-11!17;UBERON:0000083!1.28e-11!17;UBERON:0009201!1.28e-11!17;UBERON:0004819!1.28e-11!17;UBERON:0006553!1.28e-11!17;UBERON:0003074!1.28e-11!17;UBERON:0003060!1.28e-11!17;UBERON:0000064!1.64e-11!219;UBERON:0006554!1.92e-11!44;UBERON:0004111!3.41e-11!241;UBERON:0004211!3.68e-11!16;UBERON:0001285!3.68e-11!16;UBERON:0007684!3.68e-11!16;UBERON:0003220!3.68e-11!16;UBERON:0004208!3.68e-11!16;UBERON:0000119!3.87e-11!312;UBERON:0001008!6.00e-11!45;UBERON:0000489!6.40e-11!32;UBERON:0000483!1.15e-10!309;UBERON:0000080!1.23e-10!18;UBERON:0002120!1.23e-10!18;UBERON:0004875!1.23e-10!18;UBERON:0005721!1.23e-10!18;UBERON:0005754!1.23e-10!18;UBERON:0007297!1.23e-10!18;UBERON:0005177!1.95e-10!107;UBERON:0003887!2.58e-10!21;UBERON:0000025!2.69e-10!194;UBERON:0002113!5.97e-10!27;UBERON:0003918!5.97e-10!27;UBERON:0005095!5.97e-10!27;UBERON:0007687!5.97e-10!27;UBERON:0009773!7.91e-10!12;UBERON:0001231!7.91e-10!12;UBERON:0004810!7.91e-10!12;UBERON:0004876!5.52e-09!20;UBERON:0003064!7.78e-09!37;UBERON:0005172!1.14e-08!55;UBERON:0005173!1.14e-08!55;UBERON:0001225!1.31e-08!13;UBERON:0008987!1.31e-08!13;UBERON:0001851!1.75e-08!16;UBERON:0000058!3.17e-08!26;UBERON:0005911!2.97e-07!82;UBERON:0009569!3.00e-07!113;UBERON:0004119!3.88e-07!169;UBERON:0000925!3.88e-07!169;UBERON:0006595!3.88e-07!169;UBERON:0000481!4.70e-07!347;UBERON:0000353!5.24e-07!17;UBERON:0002417!7.82e-07!61;UBERON:0000916!7.82e-07!61;UBERON:0001986!9.21e-07!18;UBERON:0004638!9.21e-07!18;UBERON:0004852!9.21e-07!18 | |ontology_enrichment_uberon=UBERON:0000477!5.47e-12!286;UBERON:0006555!1.28e-11!17;UBERON:0005103!1.28e-11!17;UBERON:0000083!1.28e-11!17;UBERON:0009201!1.28e-11!17;UBERON:0004819!1.28e-11!17;UBERON:0006553!1.28e-11!17;UBERON:0003074!1.28e-11!17;UBERON:0003060!1.28e-11!17;UBERON:0000064!1.64e-11!219;UBERON:0006554!1.92e-11!44;UBERON:0004111!3.41e-11!241;UBERON:0004211!3.68e-11!16;UBERON:0001285!3.68e-11!16;UBERON:0007684!3.68e-11!16;UBERON:0003220!3.68e-11!16;UBERON:0004208!3.68e-11!16;UBERON:0000119!3.87e-11!312;UBERON:0001008!6.00e-11!45;UBERON:0000489!6.40e-11!32;UBERON:0000483!1.15e-10!309;UBERON:0000080!1.23e-10!18;UBERON:0002120!1.23e-10!18;UBERON:0004875!1.23e-10!18;UBERON:0005721!1.23e-10!18;UBERON:0005754!1.23e-10!18;UBERON:0007297!1.23e-10!18;UBERON:0005177!1.95e-10!107;UBERON:0003887!2.58e-10!21;UBERON:0000025!2.69e-10!194;UBERON:0002113!5.97e-10!27;UBERON:0003918!5.97e-10!27;UBERON:0005095!5.97e-10!27;UBERON:0007687!5.97e-10!27;UBERON:0009773!7.91e-10!12;UBERON:0001231!7.91e-10!12;UBERON:0004810!7.91e-10!12;UBERON:0004876!5.52e-09!20;UBERON:0003064!7.78e-09!37;UBERON:0005172!1.14e-08!55;UBERON:0005173!1.14e-08!55;UBERON:0001225!1.31e-08!13;UBERON:0008987!1.31e-08!13;UBERON:0001851!1.75e-08!16;UBERON:0000058!3.17e-08!26;UBERON:0005911!2.97e-07!82;UBERON:0009569!3.00e-07!113;UBERON:0004119!3.88e-07!169;UBERON:0000925!3.88e-07!169;UBERON:0006595!3.88e-07!169;UBERON:0000481!4.70e-07!347;UBERON:0000353!5.24e-07!17;UBERON:0002417!7.82e-07!61;UBERON:0000916!7.82e-07!61;UBERON:0001986!9.21e-07!18;UBERON:0004638!9.21e-07!18;UBERON:0004852!9.21e-07!18 | ||
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| ||
|short_description=p6@PDGFB | |short_description=p6@PDGFB | ||
}} | }} |
Revision as of 01:54, 18 November 2012
Short description: | p6@PDGFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PDGFB_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_BC029822_5end |
EntrezGene: | PDGFB |
HGNC: | 8800 |
UniProt: | P01127 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.96e-25 | 15 |
kidney cell | 7.62e-22 | 17 |
kidney epithelial cell | 7.62e-22 | 17 |
kidney cortical cell | 6.19e-20 | 12 |
renal cortical epithelial cell | 6.19e-20 | 12 |
kidney tubule cell | 2.07e-19 | 10 |
nephron tubule epithelial cell | 2.07e-19 | 10 |
epithelial cell | 4.73e-17 | 253 |
glomerular cell | 4.05e-14 | 7 |
kidney corpuscule cell | 4.05e-14 | 7 |
meso-epithelial cell | 1.18e-13 | 45 |
brush border epithelial cell | 1.94e-12 | 3 |
kidney cortex tubule cell | 1.94e-12 | 3 |
epithelial cell of proximal tubule | 1.94e-12 | 3 |
endothelial cell | 1.01e-10 | 36 |
mesangial cell | 1.74e-09 | 2 |
kidney interstitial cell | 1.74e-09 | 2 |
juxtaglomerular complex cell | 1.74e-09 | 2 |
renal interstitial pericyte | 1.74e-09 | 2 |
extraglomerular mesangial cell | 1.74e-09 | 2 |
amniotic epithelial cell | 6.59e-09 | 2 |
lining cell | 2.00e-08 | 58 |
barrier cell | 2.00e-08 | 58 |
glomerular endothelial cell | 1.86e-07 | 5 |
blood vessel endothelial cell | 3.09e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.09e-07 | 18 |
endothelial cell of vascular tree | 5.65e-07 | 24 |
endothelial cell of artery | 6.62e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.