FFCP PHASE1:Hg19::chr17:424968..425008,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!6.04e-12!42;CL:0000860!4.39e-11!45;CL:0000766!2.56e-07!76 | |ontology_enrichment_celltype=CL:0002057!6.04e-12!42;CL:0000860!4.39e-11!45;CL:0000766!2.56e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-24;33!CL:0002057;2.10e-24;33!CL:0000473;1.86e-16;39!CL:0000234;1.86e-16;39!CL:0000576;9.07e-14;48!CL:0000766;8.74e-11;69!CL:1000449;3.40e-09;15!CL:0002681;4.52e-09;12!CL:0002584;4.52e-09;12!CL:0000767;5.96e-09;3!CL:1000507;2.21e-08;10!CL:1000494;2.21e-08;10!CL:0000094;4.55e-08;8!CL:1000497;5.99e-08;17!CL:0002518;5.99e-08;17!CL:0000197;1.07e-07;6!CL:0000098;1.07e-07;6!CL:0002167;1.07e-07;6!CL:0000239;1.37e-07;3!CL:1000615;1.37e-07;3!CL:0002306;1.37e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;2.10e-24;33!CL:0002057;2.10e-24;33!CL:0000473;1.86e-16;39!CL:0000234;1.86e-16;39!CL:0000576;9.07e-14;48!CL:0000766;8.74e-11;69!CL:1000449;3.40e-09;15!CL:0002681;4.52e-09;12!CL:0002584;4.52e-09;12!CL:0000767;5.96e-09;3!CL:1000507;2.21e-08;10!CL:1000494;2.21e-08;10!CL:0000094;4.55e-08;8!CL:1000497;5.99e-08;17!CL:0002518;5.99e-08;17!CL:0000197;1.07e-07;6!CL:0000098;1.07e-07;6!CL:0002167;1.07e-07;6!CL:0000239;1.37e-07;3!CL:1000615;1.37e-07;3!CL:0002306;1.37e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.30e-25,42;CL:0002057,9.30e-25,42;CL:0000473,7.30e-21,48;CL:0000234,7.30e-21,48;CL:0000766,4.98e-19,72;CL:0002194,1.91e-15,59;CL:0000576,1.91e-15,59;CL:0000040,1.91e-15,59;CL:0000559,1.91e-15,59;CL:0002009,9.44e-15,61;CL:0000839,3.34e-13,66;CL:0000557,6.40e-13,67;CL:0000763,2.54e-10,108;CL:0000049,2.54e-10,108;CL:1000449,3.26e-09,15;CL:0002681,4.65e-09,12;CL:0002584,4.65e-09,12;CL:0000767,5.97e-09,3;CL:1000507,2.09e-08,10;CL:1000494,2.09e-08,10;CL:0000094,3.91e-08,8;CL:1000497,5.79e-08,17;CL:0002518,5.79e-08,17;CL:0000197,1.10e-07,6;CL:0000098,1.10e-07,6;CL:0002167,1.10e-07,6;CL:0000239,1.42e-07,3;CL:1000615,1.42e-07,3;CL:0002306,1.42e-07,3;CL:0000738,1.63e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-20;42 | |ontology_enrichment_development_v019=CL:0002057;1.02e-20;42 | ||
|ontology_enrichment_disease=DOID:2394!3.86e-07!14 | |ontology_enrichment_disease=DOID:2394!3.86e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.66e-15;14!DOID:120;4.74e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;1.66e-15;14!DOID:120;4.74e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-15,14;DOID:120,4.45e-07,27 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001851;2.23e-09;15!UBERON:0006555;3.40e-09;15!UBERON:0004819;3.40e-09;15!UBERON:0001285;3.40e-09;15!UBERON:0007684;3.40e-09;15!UBERON:0001225;4.52e-09;12!UBERON:0008987;4.52e-09;12!UBERON:0000353;4.88e-09;15!UBERON:0004211;2.21e-08;10!UBERON:0009773;2.21e-08;10!UBERON:0001231;2.21e-08;10!UBERON:0004810;2.21e-08;10!UBERON:0000992;2.77e-08;13!UBERON:0002118;4.52e-08;5!UBERON:0006853;1.37e-07;3!UBERON:0007685;1.37e-07;3!UBERON:0004134;1.37e-07;3!UBERON:0000178;6.51e-07;15!UBERON:0000179;6.51e-07;15!UBERON:0000463;6.51e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0001851;2.23e-09;15!UBERON:0006555;3.40e-09;15!UBERON:0004819;3.40e-09;15!UBERON:0001285;3.40e-09;15!UBERON:0007684;3.40e-09;15!UBERON:0001225;4.52e-09;12!UBERON:0008987;4.52e-09;12!UBERON:0000353;4.88e-09;15!UBERON:0004211;2.21e-08;10!UBERON:0009773;2.21e-08;10!UBERON:0001231;2.21e-08;10!UBERON:0004810;2.21e-08;10!UBERON:0000992;2.77e-08;13!UBERON:0002118;4.52e-08;5!UBERON:0006853;1.37e-07;3!UBERON:0007685;1.37e-07;3!UBERON:0004134;1.37e-07;3!UBERON:0000178;6.51e-07;15!UBERON:0000179;6.51e-07;15!UBERON:0000463;6.51e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.47e-14,108;UBERON:0002390,5.76e-14,98;UBERON:0003061,5.76e-14,98;UBERON:0002371,9.95e-11,76;UBERON:0002405,1.48e-09,93;UBERON:0001474,1.52e-09,82;UBERON:0001851,2.30e-09,15;UBERON:0004211,3.26e-09,15;UBERON:0009773,3.26e-09,15;UBERON:0001231,3.26e-09,15;UBERON:0001285,3.26e-09,15;UBERON:0007684,3.26e-09,15;UBERON:0004208,3.26e-09,15;UBERON:0001225,4.65e-09,12;UBERON:0008987,4.65e-09,12;UBERON:0000353,5.01e-09,15;UBERON:0006555,1.50e-08,16;UBERON:0004819,1.50e-08,16;UBERON:0004810,2.09e-08,10;UBERON:0000992,2.86e-08,13;UBERON:0004765,3.20e-08,90;UBERON:0002118,5.03e-08,5;UBERON:0001434,1.21e-07,100;UBERON:0006853,1.42e-07,3;UBERON:0007685,1.42e-07,3;UBERON:0004134,1.42e-07,3;UBERON:0000178,7.28e-07,15;UBERON:0000179,7.28e-07,15;UBERON:0000463,7.28e-07,15 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0.164201178899891,0,46.8103489450196,9.21190555433311,3.40595471295367,0,0,0,0.0774672005803016,0,0,0,2.60707781711184,2.38711957787437,0.223915474239924,0,0,5.96132778996215,5.66813915533214,0,11.3890228083785,4.52284676824008,0,6.32923263108731,3.33008918487831,0,9.65287906062532,1.93645405075148,0,10.3533286748433,6.27684145133045,0,10.7129362329816,7.38136762275015,0.639337125799041,5.93732340336089,3.19141852194611,0,11.3181603065148,4.53908179752912,0,9.2962006144995,4.17186334736161,0,9.6863920421339,8.10210799172642,0,0,0,0.209658645508376,0.22465726229299,0.901061357049038,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,1.10864698731282,0.263504357079378,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,2.84258435086262,0.35576626268671,1.00416183829401,0,0,0,0,0,1.51809538082936,0.673588117878509,1.35133776579987,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0.70296429550139,0.312160076830321,0,0,0,0,0,0,0.61417158655884,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,1.31693286264251,0,0.150238058906597,0,3.7671823494661,1.92201649936711,0,0,0.103052529238439,0.772921620136887,1.11670113798954,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,1.18692414617341,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,2.90090859405225,0.12269149171914,0,0,6.23912584592421,11.062597305424,13.8778125229863,8.19989904948992,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,1.17400313583789,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,1.18011973463482,0.451199612907412,0.462092022626489,3.92174884588428,0,0,0,0.170093705276516,3.02282282542995,1.54227252690289,4.6060894382455,8.02703638167765,1.01950509218015,3.3243040357149,1.79099803777743,0,0,0.256450125116389,1.64007322849853,0.325378394664303,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,7.24394736910534,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0.975267478179181,0,0,6.14249601335936,0.565621727814851,0,0.551365343546124,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,1.13841952129715,0.699869440489966,0,0.670302275535787,0,0.188287601553558,0,0,0,0,2.02979043692868,3.82318603571188,2.27858874869665,0.238231775457789,0,2.59389324477087,0.540031437238115,2.37937552888281,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,1.479651084554,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,3.05163472634166,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0,0,0,0,0.126621591911757,0,0,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,1.5334921960688,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.250381861413,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,3.18593534327405,0,3.10525913752519,1.65882483136342,2.65841714557995,1.5652351854352,0.601030435988874,6.47368860686952,2.03435366602331,1.45478927362048,2.04080058380728,0,8.36001366267094,0,0,0,0,0,13.2953786652454,0.260994291965212,0,47.92515218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| ||
|short_description=p@chr17:424968..425008,- | |short_description=p@chr17:424968..425008,- | ||
}} | }} |
Revision as of 15:56, 20 November 2012
Short description: | p@chr17:424968..425008, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:424968..425008, - |
Coexpression cluster: | C502_mesothelioma_Basophils_liposarcoma_Olfactory_Fibroblast_mesenchymal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.30e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.30e-25 | 42 |
defensive cell | 7.30e-21 | 48 |
phagocyte | 7.30e-21 | 48 |
myeloid leukocyte | 4.98e-19 | 72 |
monopoietic cell | 1.91e-15 | 59 |
monocyte | 1.91e-15 | 59 |
monoblast | 1.91e-15 | 59 |
promonocyte | 1.91e-15 | 59 |
macrophage dendritic cell progenitor | 9.44e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.34e-13 | 66 |
granulocyte monocyte progenitor cell | 6.40e-13 | 67 |
myeloid cell | 2.54e-10 | 108 |
common myeloid progenitor | 2.54e-10 | 108 |
epithelial cell of nephron | 3.26e-09 | 15 |
kidney cortical cell | 4.65e-09 | 12 |
renal cortical epithelial cell | 4.65e-09 | 12 |
basophil | 5.97e-09 | 3 |
kidney tubule cell | 2.09e-08 | 10 |
nephron tubule epithelial cell | 2.09e-08 | 10 |
granulocyte | 3.91e-08 | 8 |
kidney cell | 5.79e-08 | 17 |
kidney epithelial cell | 5.79e-08 | 17 |
receptor cell | 1.10e-07 | 6 |
sensory epithelial cell | 1.10e-07 | 6 |
olfactory epithelial cell | 1.10e-07 | 6 |
brush border epithelial cell | 1.42e-07 | 3 |
kidney cortex tubule cell | 1.42e-07 | 3 |
epithelial cell of proximal tubule | 1.42e-07 | 3 |
leukocyte | 1.63e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.47e-14 | 108 |
hematopoietic system | 5.76e-14 | 98 |
blood island | 5.76e-14 | 98 |
bone marrow | 9.95e-11 | 76 |
immune system | 1.48e-09 | 93 |
bone element | 1.52e-09 | 82 |
cortex | 2.30e-09 | 15 |
nephron epithelium | 3.26e-09 | 15 |
renal tubule | 3.26e-09 | 15 |
nephron tubule | 3.26e-09 | 15 |
nephron | 3.26e-09 | 15 |
uriniferous tubule | 3.26e-09 | 15 |
nephrogenic mesenchyme | 3.26e-09 | 15 |
cortex of kidney | 4.65e-09 | 12 |
renal parenchyma | 4.65e-09 | 12 |
parenchyma | 5.01e-09 | 15 |
excretory tube | 1.50e-08 | 16 |
kidney epithelium | 1.50e-08 | 16 |
nephron tubule epithelium | 2.09e-08 | 10 |
female gonad | 2.86e-08 | 13 |
skeletal element | 3.20e-08 | 90 |
right ovary | 5.03e-08 | 5 |
skeletal system | 1.21e-07 | 100 |
renal cortex tubule | 1.42e-07 | 3 |
region of nephron tubule | 1.42e-07 | 3 |
proximal tubule | 1.42e-07 | 3 |
blood | 7.28e-07 | 15 |
haemolymphatic fluid | 7.28e-07 | 15 |
organism substance | 7.28e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.45e-15 | 14 |
female reproductive organ cancer | 4.45e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.