FFCP PHASE1:Hg19::chr13:111522424..111522444,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283487|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27492|TSSclassifier=S|UniProt=|association_with_transcript=210bp_to_NR_027701,uc001vrk.2_5end|description=CAGE_peak_6_at_LINC00346_5end|id=chr13:111522424..111522444,-|ontology_enrichment_celltype=CL:0000860!1.47e-07!45|ontology_enrichment_celltype_v019=CL:0000860;1.06e-22;33!CL:0002057;1.06e-22;33!CL:0000473;2.99e-17;39!CL:0000234;2.99e-17;39!CL:0000576;7.80e-09;48!CL:0000319;2.37e-08;1!CL:0000766;8.87e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,7.26e-19,42;CL:0002057,7.26e-19,42;CL:0000473,2.88e-16,48;CL:0000234,2.88e-16,48;CL:0002194,1.25e-12,59;CL:0000576,1.25e-12,59;CL:0000040,1.25e-12,59;CL:0000559,1.25e-12,59;CL:0002009,3.70e-12,61;CL:0000839,4.16e-11,66;CL:0000557,6.46e-11,67;CL:0000766,4.89e-10,72;CL:0000319,2.29e-08,1|ontology_enrichment_development_v019=CL:0002057;5.47e-15;42!UBERON:0004874;2.37e-08;1|ontology_enrichment_disease=DOID:305!1.56e-11!106;DOID:0050687!1.15e-07!143|ontology_enrichment_disease_v019=DOID:3030;2.37e-08;1|ontology_enrichment_disease_v019_2=DOID:3030,2.29e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005090;1.34e-15;2!UBERON:0001630;1.34e-15;2!UBERON:0001723;9.54e-11;3!UBERON:0001033;9.54e-11;3!UBERON:0001389;5.80e-09;1!UBERON:0000026;5.80e-09;1!UBERON:0008784;5.80e-09;1!UBERON:0006058;5.80e-09;1!UBERON:0003663;5.80e-09;1!UBERON:0004256;5.80e-09;1!UBERON:0004708;5.80e-09;1!UBERON:0002101;5.80e-09;1!UBERON:0004709;5.80e-09;1!UBERON:0002529;5.80e-09;1!UBERON:0010538;5.80e-09;1!UBERON:0003661;5.80e-09;1!UBERON:0010890;5.80e-09;1!UBERON:0002471;5.80e-09;1!UBERON:0001383;5.80e-09;1!UBERON:0010758;5.80e-09;1!UBERON:0010707;5.80e-09;1!UBERON:0000978;5.80e-09;1!UBERON:0002103;5.80e-09;1!UBERON:0001665;5.80e-09;1!UBERON:0003823;5.80e-09;1!UBERON:0000154;5.80e-09;1!UBERON:0010709;5.80e-09;1!UBERON:0000989;2.37e-08;1!UBERON:0008811;2.37e-08;1!UBERON:0002426;2.37e-08;1!UBERON:0003831;2.37e-08;1!UBERON:0003898;2.37e-08;1!UBERON:0004830;2.37e-08;1!UBERON:0003830;2.37e-08;1!UBERON:0005175;2.37e-08;1!UBERON:0001774;2.37e-08;1!UBERON:0001103;2.37e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.08e-15,2;UBERON:0001630,1.08e-15,2;UBERON:0001723,1.00e-10,3;UBERON:0001033,1.00e-10,3;UBERON:0010056,1.00e-10,3;UBERON:0002371,2.04e-09,76;UBERON:0005418,6.03e-09,1;UBERON:0001389,6.03e-09,1;UBERON:0000026,6.03e-09,1;UBERON:0008784,6.03e-09,1;UBERON:0006058,6.03e-09,1;UBERON:0003663,6.03e-09,1;UBERON:0004256,6.03e-09,1;UBERON:0004708,6.03e-09,1;UBERON:0002101,6.03e-09,1;UBERON:0004709,6.03e-09,1;UBERON:0002529,6.03e-09,1;UBERON:0010538,6.03e-09,1;UBERON:0003661,6.03e-09,1;UBERON:0010890,6.03e-09,1;UBERON:0002471,6.03e-09,1;UBERON:0001383,6.03e-09,1;UBERON:0004357,6.03e-09,1;UBERON:0004347,6.03e-09,1;UBERON:0005420,6.03e-09,1;UBERON:0005732,6.03e-09,1;UBERON:0010758,6.03e-09,1;UBERON:0010707,6.03e-09,1;UBERON:0000978,6.03e-09,1;UBERON:0002103,6.03e-09,1;UBERON:0001665,6.03e-09,1;UBERON:0003823,6.03e-09,1;UBERON:0000154,6.03e-09,1;UBERON:0010709,6.03e-09,1;UBERON:0005733,6.03e-09,1;UBERON:0005730,6.03e-09,1;UBERON:0001474,1.34e-08,82;UBERON:0002426,1.84e-08,1;UBERON:0003831,1.84e-08,1;UBERON:0003898,1.84e-08,1;UBERON:0004830,1.84e-08,1;UBERON:0003830,1.84e-08,1;UBERON:0005175,1.84e-08,1;UBERON:0001774,1.84e-08,1;UBERON:0001103,1.84e-08,1;UBERON:0010084,1.84e-08,1;UBERON:0000989,2.13e-08,1;UBERON:0008811,2.13e-08,1;UBERON:0006258,2.13e-08,1;UBERON:0005876,2.13e-08,1;UBERON:0004874,2.13e-08,1;UBERON:0004765,1.12e-07,90;UBERON:0002405,2.27e-07,93;UBERON:0002390,6.65e-07,98;UBERON:0003061,6.65e-07,98;UBERON:0002204,7.82e-07,167;UBERON:0001434,9.91e-07,100|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0.619412741790207,0.575384784644301,1.0246428261164,0.709446689665756,3.10271112662957,3.87290810150296,2.70852973188684,0,0,0,0,1.28371610830437,1.91801137739712,0,0.199463657621632,0,2.03146467040009,3.40431134814684,3.11411124497787,0,0,0.217188844705117,1.21079900526674,2.57794345191295,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,0.775250277507987,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.487185025805993,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0.168584690078102,0,0.55146986366197,0.217879444092406,0.71181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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283487 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27492 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=210bp_to_NR_027701,uc001vrk.2_5end | |||
|description=CAGE_peak_6_at_LINC00346_5end | |||
|id=chr13:111522424..111522444,- | |||
|ontology_enrichment_celltype=CL:0000860!1.47e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-22;33!CL:0002057;1.06e-22;33!CL:0000473;2.99e-17;39!CL:0000234;2.99e-17;39!CL:0000576;7.80e-09;48!CL:0000319;2.37e-08;1!CL:0000766;8.87e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.26e-19,42;CL:0002057,7.26e-19,42;CL:0000473,2.88e-16,48;CL:0000234,2.88e-16,48;CL:0002194,1.25e-12,59;CL:0000576,1.25e-12,59;CL:0000040,1.25e-12,59;CL:0000559,1.25e-12,59;CL:0002009,3.70e-12,61;CL:0000839,4.16e-11,66;CL:0000557,6.46e-11,67;CL:0000766,4.89e-10,72;CL:0000319,2.29e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.47e-15;42!UBERON:0004874;2.37e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.56e-11!106;DOID:0050687!1.15e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3030;2.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.29e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.34e-15;2!UBERON:0001630;1.34e-15;2!UBERON:0001723;9.54e-11;3!UBERON:0001033;9.54e-11;3!UBERON:0001389;5.80e-09;1!UBERON:0000026;5.80e-09;1!UBERON:0008784;5.80e-09;1!UBERON:0006058;5.80e-09;1!UBERON:0003663;5.80e-09;1!UBERON:0004256;5.80e-09;1!UBERON:0004708;5.80e-09;1!UBERON:0002101;5.80e-09;1!UBERON:0004709;5.80e-09;1!UBERON:0002529;5.80e-09;1!UBERON:0010538;5.80e-09;1!UBERON:0003661;5.80e-09;1!UBERON:0010890;5.80e-09;1!UBERON:0002471;5.80e-09;1!UBERON:0001383;5.80e-09;1!UBERON:0010758;5.80e-09;1!UBERON:0010707;5.80e-09;1!UBERON:0000978;5.80e-09;1!UBERON:0002103;5.80e-09;1!UBERON:0001665;5.80e-09;1!UBERON:0003823;5.80e-09;1!UBERON:0000154;5.80e-09;1!UBERON:0010709;5.80e-09;1!UBERON:0000989;2.37e-08;1!UBERON:0008811;2.37e-08;1!UBERON:0002426;2.37e-08;1!UBERON:0003831;2.37e-08;1!UBERON:0003898;2.37e-08;1!UBERON:0004830;2.37e-08;1!UBERON:0003830;2.37e-08;1!UBERON:0005175;2.37e-08;1!UBERON:0001774;2.37e-08;1!UBERON:0001103;2.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.08e-15,2;UBERON:0001630,1.08e-15,2;UBERON:0001723,1.00e-10,3;UBERON:0001033,1.00e-10,3;UBERON:0010056,1.00e-10,3;UBERON:0002371,2.04e-09,76;UBERON:0005418,6.03e-09,1;UBERON:0001389,6.03e-09,1;UBERON:0000026,6.03e-09,1;UBERON:0008784,6.03e-09,1;UBERON:0006058,6.03e-09,1;UBERON:0003663,6.03e-09,1;UBERON:0004256,6.03e-09,1;UBERON:0004708,6.03e-09,1;UBERON:0002101,6.03e-09,1;UBERON:0004709,6.03e-09,1;UBERON:0002529,6.03e-09,1;UBERON:0010538,6.03e-09,1;UBERON:0003661,6.03e-09,1;UBERON:0010890,6.03e-09,1;UBERON:0002471,6.03e-09,1;UBERON:0001383,6.03e-09,1;UBERON:0004357,6.03e-09,1;UBERON:0004347,6.03e-09,1;UBERON:0005420,6.03e-09,1;UBERON:0005732,6.03e-09,1;UBERON:0010758,6.03e-09,1;UBERON:0010707,6.03e-09,1;UBERON:0000978,6.03e-09,1;UBERON:0002103,6.03e-09,1;UBERON:0001665,6.03e-09,1;UBERON:0003823,6.03e-09,1;UBERON:0000154,6.03e-09,1;UBERON:0010709,6.03e-09,1;UBERON:0005733,6.03e-09,1;UBERON:0005730,6.03e-09,1;UBERON:0001474,1.34e-08,82;UBERON:0002426,1.84e-08,1;UBERON:0003831,1.84e-08,1;UBERON:0003898,1.84e-08,1;UBERON:0004830,1.84e-08,1;UBERON:0003830,1.84e-08,1;UBERON:0005175,1.84e-08,1;UBERON:0001774,1.84e-08,1;UBERON:0001103,1.84e-08,1;UBERON:0010084,1.84e-08,1;UBERON:0000989,2.13e-08,1;UBERON:0008811,2.13e-08,1;UBERON:0006258,2.13e-08,1;UBERON:0005876,2.13e-08,1;UBERON:0004874,2.13e-08,1;UBERON:0004765,1.12e-07,90;UBERON:0002405,2.27e-07,93;UBERON:0002390,6.65e-07,98;UBERON:0003061,6.65e-07,98;UBERON:0002204,7.82e-07,167;UBERON:0001434,9.91e-07,100 | |||
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|short_description=p6@LINC00346 | |||
}} |
Revision as of 01:30, 11 September 2013
Short description: | p6@LINC00346 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LINC00346_5end |
Coexpression cluster: | NA |
Association with transcript: | 210bp_to_NR_027701, uc001vrk.2_5end |
EntrezGene: | LINC00346 |
HGNC: | 27492 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.26e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.26e-19 | 42 |
defensive cell | 2.88e-16 | 48 |
phagocyte | 2.88e-16 | 48 |
monopoietic cell | 1.25e-12 | 59 |
monocyte | 1.25e-12 | 59 |
monoblast | 1.25e-12 | 59 |
promonocyte | 1.25e-12 | 59 |
macrophage dendritic cell progenitor | 3.70e-12 | 61 |
myeloid lineage restricted progenitor cell | 4.16e-11 | 66 |
granulocyte monocyte progenitor cell | 6.46e-11 | 67 |
myeloid leukocyte | 4.89e-10 | 72 |
mucus secreting cell | 2.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.29e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.