FFCP PHASE1:Hg19::chr15:49170195..49170218,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=399694 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000558220_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_SHC4_5end | |||
|id=chr15:49170195..49170218,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.65e-21;82!UBERON:0006241;2.05e-12;3!UBERON:0003057;2.05e-12;3!UBERON:0006215;4.20e-11;3!UBERON:0010122;3.78e-08;2!UBERON:0002532;5.81e-07;206!UBERON:0010316;5.81e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.88e-37!57;UBERON:0005068!8.88e-37!57;UBERON:0006241!8.88e-37!57;UBERON:0007135!8.88e-37!57;UBERON:0002616!9.84e-31!59;UBERON:0001017!1.32e-30!82;UBERON:0005743!4.47e-29!86;UBERON:0000955!4.53e-29!69;UBERON:0006238!4.53e-29!69;UBERON:0000073!1.36e-28!94;UBERON:0001016!1.36e-28!94;UBERON:0002780!5.56e-28!41;UBERON:0001890!5.56e-28!41;UBERON:0006240!5.56e-28!41;UBERON:0003080!6.87e-27!42;UBERON:0003075!9.59e-26!86;UBERON:0007284!9.59e-26!86;UBERON:0002346!3.61e-25!90;UBERON:0002020!7.62e-25!34;UBERON:0003528!7.62e-25!34;UBERON:0001893!9.58e-25!34;UBERON:0002791!5.98e-24!33;UBERON:0001869!7.10e-23!32;UBERON:0007023!5.59e-22!115;UBERON:0003056!1.20e-18!61;UBERON:0000153!1.34e-17!129;UBERON:0007811!1.34e-17!129;UBERON:0000956!5.17e-17!25;UBERON:0000203!5.17e-17!25;UBERON:0002619!1.45e-16!22;UBERON:0000033!4.38e-16!123;UBERON:0004121!1.28e-15!169;UBERON:0000924!1.37e-15!173;UBERON:0006601!1.37e-15!173;UBERON:0001950!8.20e-15!20;UBERON:0000025!6.19e-13!194;UBERON:0004111!2.77e-12!241;UBERON:0000475!4.44e-12!365;UBERON:0000477!4.10e-11!286;UBERON:0000483!5.63e-11!309;UBERON:0003076!7.40e-11!15;UBERON:0003057!7.40e-11!15;UBERON:0000119!8.37e-11!312;UBERON:0002308!1.90e-09!9;UBERON:0000125!1.90e-09!9;UBERON:0002420!2.47e-09!9;UBERON:0007245!2.47e-09!9;UBERON:0010009!2.47e-09!9;UBERON:0010011!2.47e-09!9;UBERON:0000454!2.47e-09!9;UBERON:0004732!4.11e-09!13;UBERON:0004733!2.47e-08!12;UBERON:0002028!2.47e-08!12;UBERON:0007277!2.47e-08!12;UBERON:0000064!3.19e-08!219;UBERON:0009663!1.22e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.72e-73;34!UBERON:0003528;3.19e-71;34!UBERON:0002020;3.19e-71;34!UBERON:0002791;1.16e-68;32!UBERON:0001869;2.82e-68;32!UBERON:0000073;2.86e-62;53!UBERON:0002616;2.86e-62;53!UBERON:0002619;2.21e-61;22!UBERON:0002780;8.06e-61;41!UBERON:0001890;8.06e-61;41!UBERON:0001950;3.80e-54;20!UBERON:0000956;1.05e-53;25!UBERON:0000203;1.05e-53;25!UBERON:0001017;5.54e-40;75!UBERON:0000955;3.09e-39;68!UBERON:0001016;2.84e-34;83!UBERON:0000125;9.98e-34;9!UBERON:0002308;9.98e-34;9!UBERON:0002420;3.44e-33;9!UBERON:0007245;3.44e-33;9!UBERON:0010009;3.44e-33;9!UBERON:0010011;3.44e-33;9!UBERON:0000454;3.44e-33;9!UBERON:0004732;3.22e-27;13!UBERON:0009663;2.39e-26;7!UBERON:0004733;3.75e-24;12!UBERON:0002028;3.75e-24;12!UBERON:0002298;2.01e-23;6!UBERON:0000200;3.04e-22;6!UBERON:0000349;2.49e-19;5!UBERON:0001872;1.58e-18;5!UBERON:0007023;1.26e-17;114!UBERON:0000369;7.28e-15;4!UBERON:0002435;7.28e-15;4!UBERON:0000204;7.28e-15;4!UBERON:0002680;1.77e-14;9!UBERON:0001895;1.77e-14;9!UBERON:0001871;1.50e-13;6!UBERON:0000988;1.08e-12;3!UBERON:0011216;1.10e-12;132!UBERON:0002021;1.12e-12;5!UBERON:0001896;1.75e-12;3!UBERON:0005290;1.75e-12;3!UBERON:0002240;2.05e-12;3!UBERON:0005174;2.05e-12;3!UBERON:0001137;2.05e-12;3!UBERON:0001870;4.92e-12;3!UBERON:0005383;2.18e-11;3!UBERON:0005382;2.18e-11;3!UBERON:0010314;1.23e-09;132!UBERON:0001897;1.97e-09;2!UBERON:0010225;1.97e-09;2!UBERON:0001875;2.17e-09;2!UBERON:0006514;2.17e-09;2!UBERON:0002148;4.19e-09;2!UBERON:0006331;4.19e-09;2!UBERON:0009662;4.19e-09;2!UBERON:0001954;5.21e-09;2!UBERON:0003022;5.21e-09;2!UBERON:0002421;5.21e-09;2!UBERON:0002600;5.21e-09;2!UBERON:0002771;7.12e-09;2!UBERON:0005162;1.03e-08;2!UBERON:0000122;1.03e-08;2!UBERON:0002702;1.18e-08;2!UBERON:0001876;1.48e-08;2!UBERON:0001873;3.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.03e-121,56;UBERON:0005068,2.03e-121,56;UBERON:0006241,2.03e-121,56;UBERON:0007135,2.03e-121,56;UBERON:0000073,1.15e-110,53;UBERON:0002616,1.15e-110,53;UBERON:0001017,2.59e-96,81;UBERON:0000955,6.51e-92,68;UBERON:0006238,6.51e-92,68;UBERON:0001016,8.89e-90,89;UBERON:0002780,2.57e-86,41;UBERON:0001890,2.57e-86,41;UBERON:0003080,2.57e-86,41;UBERON:0006240,2.57e-86,41;UBERON:0003528,2.33e-85,34;UBERON:0002020,2.33e-85,34;UBERON:0001893,5.66e-85,34;UBERON:0003075,3.05e-84,82;UBERON:0007284,3.05e-84,82;UBERON:0002346,6.50e-80,86;UBERON:0002791,5.54e-78,32;UBERON:0001869,2.12e-77,32;UBERON:0010371,1.64e-64,104;UBERON:0002619,1.94e-61,22;UBERON:0003056,1.32e-59,61;UBERON:0007023,1.09e-58,114;UBERON:0001950,3.24e-54,20;UBERON:0000956,9.41e-54,25;UBERON:0000203,9.41e-54,25;UBERON:0010314,2.13e-51,132;UBERON:0004121,1.21e-42,171;UBERON:0000924,1.21e-42,171;UBERON:0006601,1.21e-42,171;UBERON:0011216,4.10e-35,223;UBERON:0003076,3.68e-34,15;UBERON:0003057,3.68e-34,15;UBERON:0000125,8.58e-34,9;UBERON:0002308,8.58e-34,9;UBERON:0002420,2.49e-33,9;UBERON:0007245,2.49e-33,9;UBERON:0010009,2.49e-33,9;UBERON:0010011,2.49e-33,9;UBERON:0000454,2.49e-33,9;UBERON:0000025,1.70e-30,192;UBERON:0004732,3.27e-27,13;UBERON:0009663,2.18e-26,7;UBERON:0004733,4.02e-24,12;UBERON:0002028,4.02e-24,12;UBERON:0007277,4.02e-24,12;UBERON:0002298,1.90e-23,6;UBERON:0004111,2.03e-22,240;UBERON:0000200,3.54e-22,6;UBERON:0000349,2.23e-19,5;UBERON:0001872,1.90e-18,5;UBERON:0000483,1.79e-17,306;UBERON:0000119,3.33e-17,309;UBERON:0000369,6.77e-15,4;UBERON:0002435,6.77e-15,4;UBERON:0000204,6.77e-15,4;UBERON:0010082,6.77e-15,4;UBERON:0002680,1.93e-14,9;UBERON:0001895,1.93e-14,9;UBERON:0010092,1.93e-14,9;UBERON:0001871,1.18e-13,6;UBERON:0002021,9.96e-13,5;UBERON:0000988,1.06e-12,3;UBERON:0001896,1.69e-12,3;UBERON:0005290,1.69e-12,3;UBERON:0010096,1.69e-12,3;UBERON:0002240,2.39e-12,3;UBERON:0005174,2.39e-12,3;UBERON:0001137,2.39e-12,3;UBERON:0001870,4.92e-12,3;UBERON:0005383,1.88e-11,3;UBERON:0005382,1.88e-11,3;UBERON:0001897,2.01e-09,2;UBERON:0010225,2.01e-09,2;UBERON:0001875,2.18e-09,2;UBERON:0006514,2.18e-09,2;UBERON:0002148,3.95e-09,2;UBERON:0006331,3.95e-09,2;UBERON:0009662,3.95e-09,2;UBERON:0001954,5.42e-09,2;UBERON:0003022,5.42e-09,2;UBERON:0002421,5.42e-09,2;UBERON:0002600,5.42e-09,2;UBERON:0002771,7.12e-09,2;UBERON:0005162,9.70e-09,2;UBERON:0000122,9.70e-09,2;UBERON:0001876,1.18e-08,2;UBERON:0002702,1.18e-08,2;UBERON:0001873,3.26e-08,2;UBERON:0010122,3.26e-08,2;UBERON:0000923,1.18e-07,560;UBERON:0010316,1.18e-07,560;UBERON:0005291,1.18e-07,560;UBERON:0006598,1.18e-07,560;UBERON:0010317,1.18e-07,560;UBERON:0002532,1.18e-07,560;UBERON:0002050,1.60e-07,564;UBERON:0005423,5.56e-07,581 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.382067028739756,0.492603536699674,0.865818594450472,0,0,0,0,0,0.369754010166788,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.351339142772504,0.785874452986276,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0.276149695926898,0.646584227275248,0.355009592516614,0.10075209822764,0.508681776931463,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0.514414748524284,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0,0,1.01637849688985,0,0,0,1.91381625495949,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,0,0.812839312631559,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0.732555718546747,0.495056999523528,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.340906509664404,0.0890320356467374,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0,0,0,0.390776190804081,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,1.44876399560722,0,0,0.593929361665277,0,3.97659059106519,4.92342957436795,0.445234820091624,0.16480387422676,0.211125408127993,0,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,3.15411533750294,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0,0,2.65722415744152,2.89431452700979,1.52581736317083,1.3269511191747,2.06883333267483,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,0,0,0,11.3233903407537,0,5.62234669740814,0,0,0.242780379534093,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0.328461828212837,0,0,0.677942222341597,0,0,3.54540457352921,0.391102765469606,0.320635281006135,0.213452994739353,0,0,0.229073192331831,0,0,0,0.707082103850386,0.135904206073614,0,0.305994652908965,0,13.2092463516154,18.0715100137431,0,0,0,0.837847203816763,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0.423366660328922,7.15706720828373,7.76359414835981,0,0.137539436597234,0.415440338029185,0,0,3.21972650287531,0,0,0.314727528809989,0.316801009558219,0.179287339332845,0,0.714695326373367,0.662091970365432,0.5085370753095,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,7.88626033805458,10.4463755376725,0,0,0,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,3.54427271986794,4.51497180137264,6.76031025815099,6.88091034828085,9.20711127755874,4.34674820589684,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0.256241518587947,0,0,8.29550616910385,0,0,0,0,0.737318726261158,0,0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| |||
|short_description=p2@SHC4 | |||
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Revision as of 07:16, 11 September 2013
Short description: | p2@SHC4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SHC4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 28bp_to_ENST00000558220_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.