FFCP PHASE1:Hg19::chr16:30751953..30751988,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10847 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16974 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000483578_5end | |||
|coexpression_cluster_id=C2370 | |||
|description=CAGE_peak_3_at_SRCAP_5end | |||
|id=chr16:30751953..30751988,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.99e-35!254;CL:0002076!3.35e-18!43;CL:0000223!1.01e-12!59;CL:0000076!4.89e-10!62;CL:0002321!5.19e-10!248;CL:0000220!1.09e-09!246;CL:0002368!2.57e-09!13;CL:0002251!6.75e-08!21 | |||
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|ontology_enrichment_development_v019=CL:0000223;2.82e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.00e-09!106;DOID:1749!7.62e-07!14;DOID:299!7.96e-07!25 | |||
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| |||
|short_description=p3@SRCAP | |||
}} |
Revision as of 10:11, 11 September 2013
Short description: | p3@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SRCAP_5end |
Coexpression cluster: | C2370_Placental_Alveolar_Urothelial_Amniotic_renal_serous_amniotic |
Association with transcript: | 0bp_to_ENST00000483578_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.68e-38 | 253 |
endo-epithelial cell | 1.86e-21 | 42 |
endodermal cell | 6.03e-15 | 58 |
respiratory epithelial cell | 5.12e-11 | 13 |
squamous epithelial cell | 6.37e-11 | 63 |
general ecto-epithelial cell | 2.23e-08 | 14 |
epithelial cell of alimentary canal | 3.28e-08 | 20 |
kidney cell | 6.82e-08 | 17 |
kidney epithelial cell | 6.82e-08 | 17 |
kidney tubule cell | 8.65e-08 | 10 |
nephron tubule epithelial cell | 8.65e-08 | 10 |
extraembryonic cell | 1.46e-07 | 19 |
epithelial cell of tracheobronchial tree | 1.91e-07 | 9 |
epithelial cell of lower respiratory tract | 1.91e-07 | 9 |
ecto-epithelial cell | 5.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.57e-10 | 106 |
squamous cell carcinoma | 3.53e-09 | 14 |
adenocarcinoma | 1.45e-07 | 25 |
cell type cancer | 2.05e-07 | 143 |
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