FFCP PHASE1:Hg19::chr1:156611960..156611974,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=63827|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23059|TSSclassifier=S|UniProt=|association_with_transcript=36bp_to_ENST00000479949_5end|coexpression_cluster_id=C1816|description=CAGE_peak_3_at_BCAN_5end|id=chr1:156611960..156611974,+|ontology_enrichment_celltype=CL:0000148!1.49e-14!10;CL:0000541!1.49e-14!10;CL:0000047!3.23e-13!8;CL:0000147!8.31e-10!14;CL:0000540!8.77e-10!6;CL:0000031!8.77e-10!6;CL:0000404!8.77e-10!6;CL:0000133!8.76e-07!59|ontology_enrichment_celltype_v019=CL:0000148;7.23e-13;10!CL:0000147;7.22e-09;14!CL:0002567;2.39e-08;3|ontology_enrichment_celltype_v019_2=CL:0000148,6.78e-13,10;CL:0000541,6.78e-13,10;CL:0000147,6.91e-09,14;CL:0002567,2.15e-08,3;CL:0000047,7.87e-08,8|ontology_enrichment_development_v019=UBERON:0006601;1.64e-18;82!UBERON:0006241;5.27e-09;3!UBERON:0003057;5.27e-09;3!UBERON:0006215;4.17e-08;3!UBERON:0010122;8.35e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.83e-78!82;UBERON:0005743!1.17e-76!86;UBERON:0000073!4.48e-75!94;UBERON:0001016!4.48e-75!94;UBERON:0001049!1.71e-74!57;UBERON:0005068!1.71e-74!57;UBERON:0006241!1.71e-74!57;UBERON:0007135!1.71e-74!57;UBERON:0002616!5.26e-62!59;UBERON:0002780!1.85e-60!41;UBERON:0001890!1.85e-60!41;UBERON:0006240!1.85e-60!41;UBERON:0003080!9.44e-59!42;UBERON:0000955!3.66e-58!69;UBERON:0006238!3.66e-58!69;UBERON:0003075!1.70e-52!86;UBERON:0007284!1.70e-52!86;UBERON:0001893!4.77e-52!34;UBERON:0002020!8.38e-52!34;UBERON:0003528!8.38e-52!34;UBERON:0002346!2.37e-51!90;UBERON:0002791!2.81e-50!33;UBERON:0001869!1.75e-48!32;UBERON:0007023!1.30e-43!115;UBERON:0004121!3.70e-40!169;UBERON:0000924!4.68e-40!173;UBERON:0006601!4.68e-40!173;UBERON:0003056!4.97e-39!61;UBERON:0002619!3.48e-38!22;UBERON:0000956!7.43e-36!25;UBERON:0000203!7.43e-36!25;UBERON:0001950!2.33e-34!20;UBERON:0000033!2.28e-30!123;UBERON:0000153!3.09e-28!129;UBERON:0007811!3.09e-28!129;UBERON:0002420!7.59e-18!9;UBERON:0007245!7.59e-18!9;UBERON:0010009!7.59e-18!9;UBERON:0010011!7.59e-18!9;UBERON:0000454!7.59e-18!9;UBERON:0002308!2.61e-17!9;UBERON:0000125!2.61e-17!9;UBERON:0003076!3.01e-16!15;UBERON:0003057!3.01e-16!15;UBERON:0009663!5.14e-14!7;UBERON:0000025!1.20e-13!194;UBERON:0004732!3.15e-13!13;UBERON:0001871!2.20e-12!7;UBERON:0000200!1.06e-11!6;UBERON:0004733!1.81e-11!12;UBERON:0002028!1.81e-11!12;UBERON:0007277!1.81e-11!12;UBERON:0002298!2.95e-11!8;UBERON:0000349!4.20e-11!5;UBERON:0001872!3.16e-10!5;UBERON:0002021!4.36e-10!5;UBERON:0001894!1.20e-09!7;UBERON:0006222!1.20e-09!7;UBERON:0000369!6.71e-09!4;UBERON:0002435!6.71e-09!4;UBERON:0000204!6.71e-09!4;UBERON:0010082!6.71e-09!4;UBERON:0004111!6.90e-09!241;UBERON:0000064!9.04e-08!219;UBERON:0000483!1.82e-07!309;UBERON:0000119!2.94e-07!312;UBERON:0002680!4.00e-07!9;UBERON:0001895!4.00e-07!9;UBERON:0010092!4.00e-07!9;UBERON:0005383!4.30e-07!3;UBERON:0005382!4.30e-07!3;UBERON:0000922!4.99e-07!612;UBERON:0002240!8.22e-07!3;UBERON:0000477!8.41e-07!286;UBERON:0002771!9.60e-07!3|ontology_enrichment_uberon_v019=UBERON:0001893;6.40e-59;34!UBERON:0003528;4.23e-58;34!UBERON:0002020;4.23e-58;34!UBERON:0001869;1.97e-57;32!UBERON:0002791;2.23e-57;32!UBERON:0002619;1.05e-53;22!UBERON:0002780;9.06e-53;41!UBERON:0001890;9.06e-53;41!UBERON:0000073;2.25e-50;53!UBERON:0002616;2.25e-50;53!UBERON:0001950;2.84e-48;20!UBERON:0000956;9.17e-47;25!UBERON:0000203;9.17e-47;25!UBERON:0001017;2.19e-36;75!UBERON:0000955;3.95e-35;68!UBERON:0001016;4.76e-31;83!UBERON:0002420;1.34e-24;9!UBERON:0007245;1.34e-24;9!UBERON:0010009;1.34e-24;9!UBERON:0010011;1.34e-24;9!UBERON:0000454;1.34e-24;9!UBERON:0000125;6.68e-24;9!UBERON:0002308;6.68e-24;9!UBERON:0009663;3.43e-19;7!UBERON:0004732;1.48e-18;13!UBERON:0004733;4.81e-16;12!UBERON:0002028;4.81e-16;12!UBERON:0000200;6.36e-16;6!UBERON:0002298;1.43e-15;6!UBERON:0007023;2.30e-15;114!UBERON:0000349;5.27e-15;5!UBERON:0001871;7.90e-15;6!UBERON:0001872;8.96e-14;5!UBERON:0002021;1.19e-13;5!UBERON:0011216;3.46e-12;132!UBERON:0000369;6.30e-12;4!UBERON:0002435;6.30e-12;4!UBERON:0000204;6.30e-12;4!UBERON:0002680;7.56e-10;9!UBERON:0001895;7.56e-10;9!UBERON:0005383;2.11e-09;3!UBERON:0005382;2.11e-09;3!UBERON:0002240;5.27e-09;3!UBERON:0005174;5.27e-09;3!UBERON:0001137;5.27e-09;3!UBERON:0000988;1.08e-08;3!UBERON:0001896;1.45e-08;3!UBERON:0005290;1.45e-08;3!UBERON:0001870;1.79e-08;3!UBERON:0010314;8.51e-08;132!UBERON:0005162;3.68e-07;2!UBERON:0000122;3.68e-07;2!UBERON:0001876;4.19e-07;2!UBERON:0001954;4.78e-07;2!UBERON:0003022;4.78e-07;2!UBERON:0002421;4.78e-07;2!UBERON:0002600;4.78e-07;2!UBERON:0001897;5.29e-07;2!UBERON:0010225;5.29e-07;2!UBERON:0002784;6.85e-07;4!UBERON:0001873;8.35e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.27e-96,56;UBERON:0005068,1.27e-96,56;UBERON:0006241,1.27e-96,56;UBERON:0007135,1.27e-96,56;UBERON:0001017,5.16e-92,81;UBERON:0000073,5.16e-89,53;UBERON:0002616,5.16e-89,53;UBERON:0001016,3.54e-85,89;UBERON:0000955,9.92e-77,68;UBERON: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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=63827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23059 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENST00000479949_5end | |||
|coexpression_cluster_id=C1816 | |||
|description=CAGE_peak_3_at_BCAN_5end | |||
|id=chr1:156611960..156611974,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.49e-14!10;CL:0000541!1.49e-14!10;CL:0000047!3.23e-13!8;CL:0000147!8.31e-10!14;CL:0000540!8.77e-10!6;CL:0000031!8.77e-10!6;CL:0000404!8.77e-10!6;CL:0000133!8.76e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.23e-13;10!CL:0000147;7.22e-09;14!CL:0002567;2.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.78e-13,10;CL:0000541,6.78e-13,10;CL:0000147,6.91e-09,14;CL:0002567,2.15e-08,3;CL:0000047,7.87e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-18;82!UBERON:0006241;5.27e-09;3!UBERON:0003057;5.27e-09;3!UBERON:0006215;4.17e-08;3!UBERON:0010122;8.35e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51877810467109,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0972672136748,1.52795370223311,14.0660936652056,6.84289784090821,23.5474958290611,8.10926256178577,132.051811875327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0079613260152,11.712586847186,3.09315525111078,2.17771144934653,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.882952955326,23.9138007897872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0493151289518,12.6164613500118,25.9497937401552,0,0,0,0,0,0,0,0,0,15.0576035588353,17.4864836006842,3.05163472634166,4.86548743697388,7.97978571174578,11.8468114463145,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.313265848516366,19.0071195005509,0,22.2551223439072,0,0,0,0,0,19.2825839827209,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,1.12990370390266,0,0,11.3959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8138695274231,11.0893356902514,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,16.6998234859954,26.6958675978688,0.160753148465019,0.275078873194468,0.415440338029185,0,0,15.6733856177704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0575785925166,10.1819103341871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2024772597689,15.2532831127454,9.51451073369399,6.30750115259078,7.4322464529691,14.8410403029906,0,0,4.09452617362449,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4110683067179,0.194860308839388,0.132864840313363,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.431299245586727,0,0,0,0,0.123935764259002,0,0,0,0,0,0,15.800389373729,5.6678630530234,11.0147362749434,21.3321018810385,8.06629427909498,15.4912245519848,16.1475645631851,31.409272457014,0,0,0,0,0,0,0,0,0,0,0,0,0,13.169829000587,10.9350933805939,11.9878341970687,13.2539043305265,18.5971435066195,0.548257766857182,1.48863353516788,0,0,3.74991285114801,0.672567444437648,0,0.227662191351298,0,0,0,10.9431270092699,12.628372524067,0,0,0,16.9684837109282,0,3.65263488203798,0,0,4.78892845983597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.655678681511872,0,0,0,11.5821995597818,5.04978880556046,98.4787845269322,0,0,0.0644578879735772,0,0,0,0,0,0,10.8938083195103,0.157771562193185,21.2133449395654,13.5268714005517,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,19.9000665470107,19.5488362178982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p3@BCAN | |||
}} |
Revision as of 00:55, 12 September 2013
Short description: | p3@BCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BCAN_5end |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | 36bp_to_ENST00000479949_5end |
EntrezGene: | BCAN |
HGNC: | 23059 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.78e-13 | 10 |
melanoblast | 6.78e-13 | 10 |
pigment cell | 6.91e-09 | 14 |
light melanocyte | 2.15e-08 | 3 |
neuronal stem cell | 7.87e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.