FFCP PHASE1:Hg19::chr2:219247021..219247037,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6556 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10907 | |||
|TSSclassifier=strong | |||
|UniProt=C0H5Y3 | |||
|association_with_transcript=0bp_to_ENST00000475225,ENST00000539932_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_SLC11A1_5end | |||
|id=chr2:219247021..219247037,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.18e-52!76;CL:0002194!3.07e-48!63;CL:0000576!3.07e-48!63;CL:0000040!3.07e-48!63;CL:0000559!3.07e-48!63;CL:0002009!5.09e-46!65;CL:0002057!5.05e-45!42;CL:0000839!2.68e-42!70;CL:0000557!2.29e-41!71;CL:0000860!9.95e-41!45;CL:0000738!8.76e-40!140;CL:0002087!1.05e-37!119;CL:0002031!4.89e-32!124;CL:0000763!4.48e-29!112;CL:0000049!4.48e-29!112;CL:0000037!7.45e-28!172;CL:0000566!7.45e-28!172;CL:0002032!1.95e-26!165;CL:0000837!1.95e-26!165;CL:0000988!1.41e-24!182;CL:0002393!5.26e-10!9;CL:0002397!5.26e-10!9;CL:0000094!1.29e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-44;33!CL:0002057;1.99e-44;33!CL:0000473;1.84e-43;39!CL:0000234;1.84e-43;39!CL:0000576;4.07e-37;48!CL:0000766;1.28e-29;69!CL:0000763;1.10e-12;100!CL:0002087;1.17e-12;104!CL:0000094;1.63e-12;8!CL:0000738;2.88e-10;136!CL:0002393;2.99e-09;6!CL:0002397;2.99e-09;6!CL:0000235;7.25e-09;6!CL:0000081;1.54e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.34e-69,72;CL:0000473,1.63e-68,48;CL:0000234,1.63e-68,48;CL:0002194,1.19e-64,59;CL:0000576,1.19e-64,59;CL:0000040,1.19e-64,59;CL:0000559,1.19e-64,59;CL:0002009,6.52e-62,61;CL:0000860,8.74e-61,42;CL:0002057,8.74e-61,42;CL:0000839,8.60e-56,66;CL:0000557,1.12e-54,67;CL:0000738,3.24e-46,136;CL:0002087,8.28e-43,115;CL:0000763,3.01e-39,108;CL:0000049,3.01e-39,108;CL:0002031,1.22e-35,120;CL:0000037,1.15e-32,168;CL:0002032,1.67e-30,161;CL:0000837,1.67e-30,161;CL:0000988,9.11e-30,177;CL:0002393,4.88e-13,9;CL:0002397,4.88e-13,9;CL:0000094,1.65e-12,8;CL:0000235,7.37e-09,6;CL:0000081,1.55e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-43;42!CL:0000049;2.55e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.41e-51!115;UBERON:0002390!8.69e-43!102;UBERON:0003061!8.69e-43!102;UBERON:0002193!1.05e-38!112;UBERON:0002371!4.60e-34!80;UBERON:0001474!4.41e-30!86;UBERON:0002405!7.05e-25!115;UBERON:0004765!3.56e-23!101;UBERON:0001434!3.56e-23!101;UBERON:0001049!4.19e-21!57;UBERON:0005068!4.19e-21!57;UBERON:0006241!4.19e-21!57;UBERON:0007135!4.19e-21!57;UBERON:0002616!1.84e-16!59;UBERON:0003080!8.51e-16!42;UBERON:0002780!2.96e-15!41;UBERON:0001890!2.96e-15!41;UBERON:0006240!2.96e-15!41;UBERON:0003081!2.06e-14!216;UBERON:0003075!4.22e-14!86;UBERON:0007284!4.22e-14!86;UBERON:0002346!8.48e-13!90;UBERON:0000955!1.02e-12!69;UBERON:0006238!1.02e-12!69;UBERON:0001017!2.20e-12!82;UBERON:0002020!5.61e-12!34;UBERON:0003528!5.61e-12!34;UBERON:0005743!7.21e-12!86;UBERON:0001893!1.37e-11!34;UBERON:0002791!3.47e-11!33;UBERON:0001869!1.94e-10!32;UBERON:0000073!1.77e-09!94;UBERON:0001016!1.77e-09!94;UBERON:0002204!1.93e-09!167;UBERON:0003056!4.70e-09!61;UBERON:0000178!7.14e-09!15;UBERON:0000179!7.14e-09!15;UBERON:0000463!7.14e-09!15;UBERON:0002619!1.84e-08!22;UBERON:0000062!1.15e-07!511;UBERON:0002308!2.26e-07!9;UBERON:0000125!2.26e-07!9;UBERON:0001950!3.41e-07!20;UBERON:0002420!3.90e-07!9;UBERON:0007245!3.90e-07!9;UBERON:0010009!3.90e-07!9;UBERON:0010011!3.90e-07!9;UBERON:0000454!3.90e-07!9;UBERON:0002298!4.71e-07!8;UBERON:0000479!6.23e-07!787;UBERON:0000956!6.53e-07!25;UBERON:0000203!6.53e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.95e-12;15!UBERON:0000179;4.95e-12;15!UBERON:0000463;4.95e-12;15!UBERON:0002298;2.89e-07;6!UBERON:0007023;6.84e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.74e-57,98;UBERON:0003061,1.74e-57,98;UBERON:0002193,1.10e-51,108;UBERON:0002371,5.66e-46,76;UBERON:0001474,3.06e-41,82;UBERON:0002405,2.84e-40,93;UBERON:0004765,6.33e-36,90;UBERON:0001434,1.67e-30,100;UBERON:0007023,6.80e-24,114;UBERON:0003081,5.75e-23,203;UBERON:0002204,1.02e-12,167;UBERON:0000178,4.97e-12,15;UBERON:0000179,4.97e-12,15;UBERON:0000463,4.97e-12,15;UBERON:0001049,2.53e-11,56;UBERON:0005068,2.53e-11,56;UBERON:0006241,2.53e-11,56;UBERON:0007135,2.53e-11,56;UBERON:0000073,3.06e-10,53;UBERON:0002616,3.06e-10,53;UBERON:0000926,5.53e-09,315;UBERON:0004120,5.53e-09,315;UBERON:0006603,5.53e-09,315;UBERON:0002780,1.66e-07,41;UBERON:0001890,1.66e-07,41;UBERON:0003080,1.66e-07,41;UBERON:0006240,1.66e-07,41;UBERON:0002298,2.77e-07,6;UBERON:0003528,4.29e-07,34;UBERON:0002020,4.29e-07,34;UBERON:0000955,5.10e-07,68;UBERON:0006238,5.10e-07,68;UBERON:0001017,9.63e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,25.1753137183299,23.41359328393,39.1684791989672,0,0,0,0,0,0,40.9956602313589,71.9954566417809,38.6279349874216,1.79132379391939,2.59114932815184,3.60605794687861,74.5892964939167,85.7778392173597,65.2551124595226,113.425370009974,109.370658213806,134.10285859758,118.816958029048,118.090085709915,80.1674759322304,125.832173468866,91.6588250689033,97.5070703479261,126.122367493545,85.4196249681057,58.8775529246122,134.064744858455,112.325159476633,113.802008392229,60.362787934169,70.6101347980577,47.3109473091291,94.3180025542898,83.4056280295976,62.9050471485531,168.336605722018,173.132328915507,115.327276538417,77.4911363370712,88.018355001028,41.140110367315,47.321184133875,40.8200255932884,40.4641185831166,66.6108782698716,45.8039523166594,52.8787180233394,43.0369243049285,41.3746688574107,40.0034496744548,1.75996244461323,1.09227722252426,1.77901850772711,1.70692089026603,0.400395987036012,0.574752439954483,1.32208974556972,1.90810750907073,0.569212969109448,4.11066032559657,1.14681968437569,0,13.4522055115569,0.263384084775077,0.196709770113833,0,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,1.35517607169996,0.895906278080929,2.49861453104692,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,4.84622579341537,0,0,0.324547393654683,1.0447784237956,6.78085598646212,2.14641561874808,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.5640963796049,116.334079244498,0,0,0,0,0,2.12801029319014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9133135417784,85.4115567758218,83.2334508816878,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,6.52934218861764,18.9750545534728,0,0,0,0,0,0,0,2.36436912242313,0.431255149719035,0.898401253958239,0,0,0,0,0,107.857011448394,131.631042049771,108.576864520241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5377148473947,24.5914188933223,18.7840501734062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,5.93105944893709,0,0,0,0,34.5064374277875,37.4672231499764,30.1913009202306,20.2497009139121,31.2635327545508,49.2839716506465,34.0219805460012,33.3112574043594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.687010689511529,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,6.44635988796334,0,0,0,0.23874448473769,0,0.307160702099232,2.98244294329889,1.54736358051564,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,3.15658898038188,23.948309234694,0,0,2.78304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,2.65722415744152,0.964771509003264,1.52581736317083,0.552896299656123,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,1.41542379259422,0,0.234264445725339,0,0,0,0.789168805698781,0,0,15.0384059515801,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0.316553979779393,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,7.80546375322726,4.51787750343577,0,0,0,0.558564802544508,0.229160424011684,4.30723814746088,1.39775300349294,0.858452096273142,1.56220020209311,1.61240333968143,0,0,0,0,0,0,0,4.77137813885582,3.40508515278939,0,0,0,0,0,0.242998226632099,0,0.86686278029118,0.891727998294968,0,0.537862017998534,0,0,3.31045985182716,0,0,0,0,0,0,0,0,0.439656701034247,5.30027555648885,5.68845007990822,3.70251284879532,0,0,14.3095132840711,1.72924735609633,28.1682557636093,3.96932817449561,0,0,0,0,0,0,0,0,0.886068179966986,1.58634144372552,2.50381861413,2.29363678276028,3.10601344303186,5.65077266766589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,2.8339315265117,4.62938191265739,0.205116364240755,0,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0.977734268540344,0,1.56302802246618,0,0,0,0.540300676947157,2.34323429584154,1.86018116851066,0.380494861163441,0,0,0,0,0,2.14280734351315,2.01770233331294,0.606965604236632,0.682986574053893,1.41923792260222,0,0,1.63127359144396,0.197318320688547,0,0,0.39246546425257,1.57115589916002,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,1.29485767437579,0.615976841137482,0,0,0,0,0,0,0,0,0.385870790539723,0,0,1.47088993052343,0,8.04864715171276,5.94092800654172,0.4226557275834,0,5.35708332485165,4.38313638220325,0,0,0,0,2.92134555298607,0,4.58686666084644,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p3@SLC11A1 | |||
}} |
Revision as of 08:39, 21 January 2014
Short description: | p3@SLC11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC11A1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000475225, ENST00000539932_5end |
EntrezGene: | SLC11A1 |
HGNC: | 10907 |
UniProt: | C0H5Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.34e-69 | 72 |
defensive cell | 1.63e-68 | 48 |
phagocyte | 1.63e-68 | 48 |
monopoietic cell | 1.19e-64 | 59 |
monocyte | 1.19e-64 | 59 |
monoblast | 1.19e-64 | 59 |
promonocyte | 1.19e-64 | 59 |
macrophage dendritic cell progenitor | 6.52e-62 | 61 |
classical monocyte | 8.74e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.74e-61 | 42 |
myeloid lineage restricted progenitor cell | 8.60e-56 | 66 |
granulocyte monocyte progenitor cell | 1.12e-54 | 67 |
leukocyte | 3.24e-46 | 136 |
nongranular leukocyte | 8.28e-43 | 115 |
myeloid cell | 3.01e-39 | 108 |
common myeloid progenitor | 3.01e-39 | 108 |
hematopoietic lineage restricted progenitor cell | 1.22e-35 | 120 |
hematopoietic stem cell | 1.15e-32 | 168 |
hematopoietic oligopotent progenitor cell | 1.67e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-30 | 161 |
hematopoietic cell | 9.11e-30 | 177 |
intermediate monocyte | 4.88e-13 | 9 |
CD14-positive, CD16-positive monocyte | 4.88e-13 | 9 |
granulocyte | 1.65e-12 | 8 |
macrophage | 7.37e-09 | 6 |
blood cell | 1.55e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.74e-57 | 98 |
blood island | 1.74e-57 | 98 |
hemolymphoid system | 1.10e-51 | 108 |
bone marrow | 5.66e-46 | 76 |
bone element | 3.06e-41 | 82 |
immune system | 2.84e-40 | 93 |
skeletal element | 6.33e-36 | 90 |
skeletal system | 1.67e-30 | 100 |
adult organism | 6.80e-24 | 114 |
lateral plate mesoderm | 5.75e-23 | 203 |
musculoskeletal system | 1.02e-12 | 167 |
blood | 4.97e-12 | 15 |
haemolymphatic fluid | 4.97e-12 | 15 |
organism substance | 4.97e-12 | 15 |
neural tube | 2.53e-11 | 56 |
neural rod | 2.53e-11 | 56 |
future spinal cord | 2.53e-11 | 56 |
neural keel | 2.53e-11 | 56 |
regional part of nervous system | 3.06e-10 | 53 |
regional part of brain | 3.06e-10 | 53 |
mesoderm | 5.53e-09 | 315 |
mesoderm-derived structure | 5.53e-09 | 315 |
presumptive mesoderm | 5.53e-09 | 315 |
regional part of forebrain | 1.66e-07 | 41 |
forebrain | 1.66e-07 | 41 |
anterior neural tube | 1.66e-07 | 41 |
future forebrain | 1.66e-07 | 41 |
brainstem | 2.77e-07 | 6 |
brain grey matter | 4.29e-07 | 34 |
gray matter | 4.29e-07 | 34 |
brain | 5.10e-07 | 68 |
future brain | 5.10e-07 | 68 |
central nervous system | 9.63e-07 | 81 |