FFCP PHASE1:Hg19::chr6:132455157..132455176,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100507254 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000458028,NR_038981,uc003qdc.2,uc003qdd.2_5end | |||
|coexpression_cluster_id=C4560 | |||
|description=CAGE_peak_1_at_LOC100507254_5end | |||
|id=chr6:132455157..132455176,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.07e-55!24;CL:0000115!1.18e-41!35;CL:0000071!2.92e-41!18;CL:0002546!2.92e-41!18;CL:0002078!2.07e-31!44;CL:0000213!2.22e-22!57;CL:0000215!2.22e-22!57;CL:1000413!3.76e-22!9;CL:0000236!1.27e-18!14;CL:0002544!2.82e-15!6;CL:0005020!5.72e-15!6;CL:0002138!5.72e-15!6;CL:0005022!5.72e-15!6;CL:0002543!1.23e-14!6;CL:0000945!1.99e-13!24;CL:0000826!1.99e-13!24;CL:0000222!4.06e-10!119;CL:0000076!2.91e-08!62;CL:0002618!3.94e-08!3;CL:0002144!9.91e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.98e-100;24!CL:0000115;4.50e-72;36!CL:0000071;1.11e-70;18!CL:1000413;1.57e-46;9!CL:0002078;4.55e-43;45!CL:0000236;4.19e-36;13!CL:0002544;1.82e-31;6!CL:0000213;4.46e-31;58!CL:0000215;4.46e-31;58!CL:0002138;9.27e-31;6!CL:0002543;4.99e-30;6!CL:0000945;9.97e-19;24!CL:0002618;7.72e-16;3!CL:0002545;9.82e-12;2!CL:0000076;2.06e-11;63!CL:0002188;2.57e-09;5!CL:1000746;8.81e-07;7!CL:1000612;8.81e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.71e-100,24;CL:0000115,4.14e-84,36;CL:0000071,1.09e-70,18;CL:0002546,1.09e-70,18;CL:0002078,3.59e-66,45;CL:0000213,4.40e-50,58;CL:0000215,4.40e-50,58;CL:1000413,1.57e-46,9;CL:0000236,2.10e-33,14;CL:0002544,1.87e-31,6;CL:0005020,8.81e-31,6;CL:0002138,8.81e-31,6;CL:0005022,8.81e-31,6;CL:0002543,4.75e-30,6;CL:0000222,5.75e-25,121;CL:0000945,9.88e-19,24;CL:0000826,9.88e-19,24;CL:0000076,1.34e-17,63;CL:0002618,7.34e-16,3;CL:0002545,1.06e-11,2;CL:0002188,2.72e-09,5;CL:0002321,6.47e-09,250;CL:0000838,1.10e-07,52;CL:0000542,1.66e-07,53;CL:0000051,1.66e-07,53;CL:0000066,3.25e-07,253;CL:1000746,9.18e-07,7;CL:1000612,9.18e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-70;18!CL:0005022;9.27e-31;6!CL:0000222;8.06e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.92e-41!18;UBERON:0004638!2.92e-41!18;UBERON:0004852!2.92e-41!18;UBERON:0000487!1.01e-32!22;UBERON:0006914!4.07e-28!25;UBERON:0003915!3.76e-22!9;UBERON:0004700!3.76e-22!9;UBERON:0001917!3.76e-22!9;UBERON:0000055!1.41e-21!69;UBERON:0002049!9.51e-18!79;UBERON:0007798!9.51e-18!79;UBERON:0001981!6.01e-15!60;UBERON:0007500!6.01e-15!60;UBERON:0004537!6.01e-15!60;UBERON:0006965!6.01e-15!60;UBERON:0001638!2.15e-12!9;UBERON:0003920!2.15e-12!9;UBERON:0004582!2.15e-12!9;UBERON:0004535!2.33e-12!110;UBERON:0001009!8.34e-12!113;UBERON:0002465!2.54e-11!10;UBERON:0001473!5.53e-11!8;UBERON:0004536!5.53e-11!8;UBERON:0006558!5.53e-11!8;UBERON:0004872!8.31e-10!84;UBERON:0001915!9.91e-08!3;UBERON:0001982!9.91e-08!3;UBERON:0003914!2.30e-07!118;UBERON:0001637!9.79e-07!42;UBERON:0003509!9.79e-07!42;UBERON:0004572!9.79e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.11e-70;18!UBERON:0001986;1.11e-70;18!UBERON:0004852;1.11e-70;18!UBERON:0000487;3.59e-57;22!UBERON:0006914;7.10e-50;25!UBERON:0003915;1.57e-46;9!UBERON:0004700;1.57e-46;9!UBERON:0001917;1.57e-46;9!UBERON:0000490;4.72e-34;33!UBERON:0001473;6.15e-23;8!UBERON:0004536;6.15e-23;8!UBERON:0006558;6.15e-23;8!UBERON:0000055;3.30e-21;65!UBERON:0001638;7.57e-20;9!UBERON:0003920;7.57e-20;9!UBERON:0004582;7.57e-20;9!UBERON:0002465;3.08e-18;10!UBERON:0002049;6.04e-15;75!UBERON:0007798;6.04e-15;75!UBERON:0007500;2.21e-14;56!UBERON:0001981;2.21e-14;56!UBERON:0004537;2.21e-14;56!UBERON:0005800;9.82e-12;2!UBERON:0001515;9.82e-12;2!UBERON:0003914;4.21e-11;74!UBERON:0001637;2.08e-10;42!UBERON:0003509;2.08e-10;42!UBERON:0004572;2.08e-10;42!UBERON:0002066;1.06e-09;5!UBERON:0000947;1.50e-08;21!UBERON:0010191;1.50e-08;21!UBERON:0004111;4.87e-08;130!UBERON:0004535;1.22e-07;109!UBERON:0001009;1.43e-07;112!UBERON:0000025;1.92e-07;93!UBERON:0004573;7.18e-07;33!UBERON:0004571;7.18e-07;33!UBERON:0000074;8.81e-07;7!UBERON:0001229;8.81e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.09e-70,18;UBERON:0001986,1.09e-70,18;UBERON:0004852,1.09e-70,18;UBERON:0000487,3.52e-57,22;UBERON:0006914,6.99e-50,25;UBERON:0003915,1.57e-46,9;UBERON:0004700,1.57e-46,9;UBERON:0001917,1.57e-46,9;UBERON:0000055,3.69e-35,68;UBERON:0002049,5.62e-30,78;UBERON:0007798,5.62e-30,78;UBERON:0001473,5.92e-23,8;UBERON:0004536,5.92e-23,8;UBERON:0006558,5.92e-23,8;UBERON:0007500,1.49e-21,59;UBERON:0001981,1.49e-21,59;UBERON:0004537,1.49e-21,59;UBERON:0006965,1.49e-21,59;UBERON:0004535,5.88e-20,109;UBERON:0001638,7.32e-20,9;UBERON:0003920,7.32e-20,9;UBERON:0004582,7.32e-20,9;UBERON:0001009,2.78e-19,112;UBERON:0002465,2.99e-18,10;UBERON:0004872,3.28e-14,83;UBERON:0003914,5.45e-13,117;UBERON:0005800,1.06e-11,2;UBERON:0001515,1.06e-11,2;UBERON:0001637,1.17e-10,42;UBERON:0003509,1.17e-10,42;UBERON:0004572,1.17e-10,42;UBERON:0002066,1.03e-09,5;UBERON:0004111,1.09e-08,240;UBERON:0000947,1.51e-08,21;UBERON:0010191,1.51e-08,21;UBERON:0000490,2.63e-07,148;UBERON:0004573,7.48e-07,33;UBERON:0004571,7.48e-07,33;UBERON:0010532,9.18e-07,7;UBERON:0000074,9.18e-07,7;UBERON:0001229,9.18e-07,7;UBERON:0001230,9.18e-07,7;UBERON:0003220,9.18e-07,7;UBERON:0005749,9.18e-07,7;UBERON:0004199,9.18e-07,7;UBERON:0004209,9.18e-07,7;UBERON:0004198,9.18e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,8.19207916893197,6.22656477704488,6.82768356106412,10.8106916499723,10.9202963591352,10.5767179645578,11.4486450544244,1.70763890732835,1.17447437874188,0.764546456250458,0,0,8.42829071280246,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0502512913713,18.9251610923347,18.3984465852025,19.2204700254163,37.7549492588915,27.7869222359468,18.6005520217761,30.7515943411501,35.576626268671,41.1706353700544,0.805658634218294,11.4040815857777,0.976248230192678,18.0154909369476,31.5955359673886,25.0932236478264,7.85852804191594,7.77019215334923,9.19899824795299,9.49265659568129,14.1065342826414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55707732316674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.8063533134255,2.31492756288305,10.6542325251375,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06168669497728,7.55705706357488,6.16909010761157,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p1@LOC100507254 | |||
}} |
Revision as of 13:55, 22 January 2014
Short description: | p1@LOC100507254 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100507254_5end |
Coexpression cluster: | C4560_Endothelial_CD19_Lymphatic_CD34_Renal_Fibroblast_basal |
Association with transcript: | 39bp_to_ENST00000458028, NR_038981, uc003qdc.2, uc003qdd.2_5end |
EntrezGene: | LOC100507254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.71e-100 | 24 |
endothelial cell | 4.14e-84 | 36 |
blood vessel endothelial cell | 1.09e-70 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-70 | 18 |
meso-epithelial cell | 3.59e-66 | 45 |
lining cell | 4.40e-50 | 58 |
barrier cell | 4.40e-50 | 58 |
endothelial cell of artery | 1.57e-46 | 9 |
B cell | 2.10e-33 | 14 |
aortic endothelial cell | 1.87e-31 | 6 |
lymphangioblast | 8.81e-31 | 6 |
endothelial cell of lymphatic vessel | 8.81e-31 | 6 |
vascular lymphangioblast | 8.81e-31 | 6 |
vein endothelial cell | 4.75e-30 | 6 |
mesodermal cell | 5.75e-25 | 121 |
lymphocyte of B lineage | 9.88e-19 | 24 |
pro-B cell | 9.88e-19 | 24 |
squamous epithelial cell | 1.34e-17 | 63 |
endothelial cell of umbilical vein | 7.34e-16 | 3 |
thoracic aorta endothelial cell | 1.06e-11 | 2 |
glomerular endothelial cell | 2.72e-09 | 5 |
embryonic cell | 6.47e-09 | 250 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 52 |
lymphocyte | 1.66e-07 | 53 |
common lymphoid progenitor | 1.66e-07 | 53 |
epithelial cell | 3.25e-07 | 253 |
glomerular cell | 9.18e-07 | 7 |
kidney corpuscule cell | 9.18e-07 | 7 |