FFCP PHASE1:Hg19::chr9:134103484..134103487,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8021 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8064 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-74bp_to_ENST00000498010_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_16_at_NUP214_5end | |||
|id=chr9:134103484..134103487,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.82e-59!76;CL:0002057!2.56e-58!42;CL:0002194!1.58e-55!63;CL:0000576!1.58e-55!63;CL:0000040!1.58e-55!63;CL:0000559!1.58e-55!63;CL:0000860!1.24e-53!45;CL:0002009!2.06e-53!65;CL:0000839!1.20e-48!70;CL:0000557!8.93e-48!71;CL:0000763!7.54e-46!112;CL:0000049!7.54e-46!112;CL:0000738!1.13e-36!140;CL:0000037!1.49e-35!172;CL:0000566!1.49e-35!172;CL:0002087!9.69e-35!119;CL:0000988!1.36e-32!182;CL:0002032!4.02e-32!165;CL:0000837!4.02e-32!165;CL:0002031!3.48e-28!124;CL:0002393!6.39e-18!9;CL:0002397!6.39e-18!9;CL:0000094!4.98e-10!8;CL:0000134!3.66e-08!358;CL:0000775!5.06e-08!3;CL:0002320!1.03e-07!365;CL:0000767!2.30e-07!3;CL:0000081!5.06e-07!11;CL:0000875!5.50e-07!3;CL:0002396!5.50e-07!3;CL:0000842!7.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-54;33!CL:0002057;2.31e-54;33!CL:0000473;1.87e-40;39!CL:0000234;1.87e-40;39!CL:0000576;5.79e-39;48!CL:0000766;2.87e-32;69!CL:0000775;1.98e-19;3!CL:0000094;4.20e-19;8!CL:0000763;3.97e-16;100!CL:0000081;7.75e-14;11!CL:0000738;1.43e-10;136!CL:0002087;1.31e-09;104!CL:0002393;2.75e-09;6!CL:0002397;2.75e-09;6!CL:0000767;5.72e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-69,42;CL:0002057,1.68e-69,42;CL:0000473,3.12e-60,48;CL:0000234,3.12e-60,48;CL:0000766,1.56e-58,72;CL:0002194,2.99e-47,59;CL:0000576,2.99e-47,59;CL:0000040,2.99e-47,59;CL:0000559,2.99e-47,59;CL:0002009,1.42e-45,61;CL:0000839,8.02e-42,66;CL:0000557,3.88e-41,67;CL:0000763,1.95e-37,108;CL:0000049,1.95e-37,108;CL:0000738,1.12e-28,136;CL:0002032,2.07e-23,161;CL:0000837,2.07e-23,161;CL:0000037,3.26e-22,168;CL:0002087,3.75e-22,115;CL:0002031,4.86e-21,120;CL:0000988,8.20e-21,177;CL:0000775,1.88e-19,3;CL:0000094,2.96e-19,8;CL:0000081,6.03e-14,11;CL:0002393,2.06e-10,9;CL:0002397,2.06e-10,9;CL:0000767,4.08e-09,3;CL:0000134,1.17e-07,354;CL:0002320,2.11e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.26e-50;42!CL:0000049;3.63e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-54!102;UBERON:0003061!2.22e-54!102;UBERON:0002193!5.02e-48!112;UBERON:0002371!6.19e-43!80;UBERON:0001474!5.45e-39!86;UBERON:0004765!3.46e-31!101;UBERON:0001434!3.46e-31!101;UBERON:0002405!1.61e-28!115;UBERON:0003081!1.44e-20!216;UBERON:0002204!1.55e-14!167;UBERON:0000178!1.08e-12!15;UBERON:0000179!1.08e-12!15;UBERON:0000463!1.08e-12!15;UBERON:0002384!1.53e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-09;15!UBERON:0000179;1.61e-09;15!UBERON:0000463;1.61e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.12e-41,98;UBERON:0003061,3.12e-41,98;UBERON:0002193,5.88e-37,108;UBERON:0002371,8.88e-36,76;UBERON:0001474,7.53e-33,82;UBERON:0004765,1.52e-29,90;UBERON:0002405,1.89e-28,93;UBERON:0001434,3.78e-26,100;UBERON:0003081,3.29e-17,203;UBERON:0002204,8.05e-14,167;UBERON:0000178,1.44e-09,15;UBERON:0000179,1.44e-09,15;UBERON:0000463,1.44e-09,15;UBERON:0000926,3.84e-09,315;UBERON:0004120,3.84e-09,315;UBERON:0006603,3.84e-09,315;UBERON:0002384,4.73e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.383829398097213,1.85779347979291,0,0,0,0,0,0.293600439334847,0.553995408531877,0.802177789880567,1.08505435357926,0.671746422719773,0.32389366601898,0.257575567634187,3.19876125315042,1.51150377475524,1.69808842831471,1.62700325833979,0,0.929119112685311,0,0.768482119587302,0,2.75796544589295,1.29096936716765,2.70852973188684,3.01187743268168,0.545812300115692,0.224723484445085,1.22433556948361,1.60464513538047,1.27867425159808,0.329851300186716,1.79517291859469,0.426224750532694,1.7412554317715,0,0,2.00998932205395,1.0429658368404,0.217188844705117,0,1.10483290796269,0.316462387440884,1.26753171787165,1.06302149982522,0.628975936525128,2.47122988522289,2.4028302854641,1.12507910687956,0.285012743741249,1.9891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,2.24702107184155,5.9832291840805,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.52234282769651,0,1.13929437434833,0.952927101831156,1.64544909234478,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0.614481528616916,0.447352215784832,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p16@NUP214 | |||
}} |
Revision as of 03:46, 23 January 2014
Short description: | p16@NUP214 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NUP214_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -74bp_to_ENST00000498010_5end |
EntrezGene: | NUP214 |
HGNC: | 8064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-69 | 42 |
defensive cell | 3.12e-60 | 48 |
phagocyte | 3.12e-60 | 48 |
myeloid leukocyte | 1.56e-58 | 72 |
monopoietic cell | 2.99e-47 | 59 |
monocyte | 2.99e-47 | 59 |
monoblast | 2.99e-47 | 59 |
promonocyte | 2.99e-47 | 59 |
macrophage dendritic cell progenitor | 1.42e-45 | 61 |
myeloid lineage restricted progenitor cell | 8.02e-42 | 66 |
granulocyte monocyte progenitor cell | 3.88e-41 | 67 |
myeloid cell | 1.95e-37 | 108 |
common myeloid progenitor | 1.95e-37 | 108 |
leukocyte | 1.12e-28 | 136 |
hematopoietic oligopotent progenitor cell | 2.07e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-23 | 161 |
hematopoietic stem cell | 3.26e-22 | 168 |
nongranular leukocyte | 3.75e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 4.86e-21 | 120 |
hematopoietic cell | 8.20e-21 | 177 |
neutrophil | 1.88e-19 | 3 |
granulocyte | 2.96e-19 | 8 |
blood cell | 6.03e-14 | 11 |
intermediate monocyte | 2.06e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.06e-10 | 9 |
basophil | 4.08e-09 | 3 |
mesenchymal cell | 1.17e-07 | 354 |
connective tissue cell | 2.11e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.12e-41 | 98 |
blood island | 3.12e-41 | 98 |
hemolymphoid system | 5.88e-37 | 108 |
bone marrow | 8.88e-36 | 76 |
bone element | 7.53e-33 | 82 |
skeletal element | 1.52e-29 | 90 |
immune system | 1.89e-28 | 93 |
skeletal system | 3.78e-26 | 100 |
lateral plate mesoderm | 3.29e-17 | 203 |
musculoskeletal system | 8.05e-14 | 167 |
blood | 1.44e-09 | 15 |
haemolymphatic fluid | 1.44e-09 | 15 |
organism substance | 1.44e-09 | 15 |
mesoderm | 3.84e-09 | 315 |
mesoderm-derived structure | 3.84e-09 | 315 |
presumptive mesoderm | 3.84e-09 | 315 |
connective tissue | 4.73e-07 | 371 |