FFCP PHASE1:Hg19::chr10:104154951..104154972,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104154951..104154972,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:104154951..104154972,- | |description=CAGE_peak_at_chr10:104154951..104154972,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!3.33e-71!140;CL:0002057!1.98e-64!42;CL:0000860!2.87e-59!45;CL:0000988!3.75e-59!182;CL:0000037!9.48e-59!172;CL:0000566!9.48e-59!172;CL:0000766!4.27e-58!76;CL:0002031!3.66e-51!124;CL:0002032!4.90e-51!165;CL:0000837!4.90e-51!165;CL:0002087!6.83e-49!119;CL:0000557!7.63e-47!71;CL:0000839!3.79e-43!70;CL:0002009!4.91e-43!65;CL:0000763!1.87e-42!112;CL:0000049!1.87e-42!112;CL:0002194!3.51e-40!63;CL:0000576!3.51e-40!63;CL:0000040!3.51e-40!63;CL:0000559!3.51e-40!63;CL:0000134!1.95e-26!358;CL:0002320!1.78e-25!365;CL:0000219!4.30e-22!390;CL:0000034!8.24e-20!444;CL:0000048!1.71e-19!430;CL:0000723!6.76e-19!436;CL:0000094!3.35e-16!8;CL:0000081!4.57e-14!11;CL:0002393!5.09e-14!9;CL:0002397!5.09e-14!9;CL:0000080!4.91e-11!6;CL:0002371!1.11e-09!591;CL:0000144!5.09e-09!625;CL:0000838!9.63e-09!52;CL:0000542!1.74e-08!53;CL:0000051!1.74e-08!53;CL:0000063!5.28e-08!578;CL:0000775!1.13e-07!3;CL:0000623!2.30e-07!3;CL:0000825!2.30e-07!3;CL:0000842!5.19e-07!3;CL:0000784!6.46e-07!3;CL:0000003!7.50e-07!722 | |ontology_enrichment_celltype=CL:0000738!3.33e-71!140;CL:0002057!1.98e-64!42;CL:0000860!2.87e-59!45;CL:0000988!3.75e-59!182;CL:0000037!9.48e-59!172;CL:0000566!9.48e-59!172;CL:0000766!4.27e-58!76;CL:0002031!3.66e-51!124;CL:0002032!4.90e-51!165;CL:0000837!4.90e-51!165;CL:0002087!6.83e-49!119;CL:0000557!7.63e-47!71;CL:0000839!3.79e-43!70;CL:0002009!4.91e-43!65;CL:0000763!1.87e-42!112;CL:0000049!1.87e-42!112;CL:0002194!3.51e-40!63;CL:0000576!3.51e-40!63;CL:0000040!3.51e-40!63;CL:0000559!3.51e-40!63;CL:0000134!1.95e-26!358;CL:0002320!1.78e-25!365;CL:0000219!4.30e-22!390;CL:0000034!8.24e-20!444;CL:0000048!1.71e-19!430;CL:0000723!6.76e-19!436;CL:0000094!3.35e-16!8;CL:0000081!4.57e-14!11;CL:0002393!5.09e-14!9;CL:0002397!5.09e-14!9;CL:0000080!4.91e-11!6;CL:0002371!1.11e-09!591;CL:0000144!5.09e-09!625;CL:0000838!9.63e-09!52;CL:0000542!1.74e-08!53;CL:0000051!1.74e-08!53;CL:0000063!5.28e-08!578;CL:0000775!1.13e-07!3;CL:0000623!2.30e-07!3;CL:0000825!2.30e-07!3;CL:0000842!5.19e-07!3;CL:0000784!6.46e-07!3;CL:0000003!7.50e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.09e-53;33!CL:0002057;7.09e-53;33!CL:0000576;2.09e-39;48!CL:0000473;2.26e-35;39!CL:0000234;2.26e-35;39!CL:0000766;6.53e-26;69!CL:0002393;1.15e-22;6!CL:0002397;1.15e-22;6!CL:0002087;9.51e-19;104!CL:0000738;4.08e-14;136!CL:0000775;8.28e-13;3!CL:0000094;1.36e-12;8!CL:0000623;3.05e-12;3!CL:0000784;1.95e-11;3!CL:0000763;2.55e-11;100!CL:0000988;1.09e-10;177!CL:0000624;1.19e-09;6!CL:0000771;2.72e-09;2!CL:0000081;4.77e-09;11!CL:0000791;6.91e-09;18!CL:0000789;6.91e-09;18!CL:0002419;6.91e-09;18!CL:0000219;6.19e-08;193 | |ontology_enrichment_celltype_v019=CL:0000860;7.09e-53;33!CL:0002057;7.09e-53;33!CL:0000576;2.09e-39;48!CL:0000473;2.26e-35;39!CL:0000234;2.26e-35;39!CL:0000766;6.53e-26;69!CL:0002393;1.15e-22;6!CL:0002397;1.15e-22;6!CL:0002087;9.51e-19;104!CL:0000738;4.08e-14;136!CL:0000775;8.28e-13;3!CL:0000094;1.36e-12;8!CL:0000623;3.05e-12;3!CL:0000784;1.95e-11;3!CL:0000763;2.55e-11;100!CL:0000988;1.09e-10;177!CL:0000624;1.19e-09;6!CL:0000771;2.72e-09;2!CL:0000081;4.77e-09;11!CL:0000791;6.91e-09;18!CL:0000789;6.91e-09;18!CL:0002419;6.91e-09;18!CL:0000219;6.19e-08;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-71,42;CL:0002057,1.34e-71,42;CL:0000738,3.57e-66,136;CL:0000473,1.08e-61,48;CL:0000234,1.08e-61,48;CL:0000766,1.06e-57,72;CL:0002087,2.03e-57,115;CL:0000037,1.23e-51,168;CL:0002194,2.99e-51,59;CL:0000576,2.99e-51,59;CL:0000040,2.99e-51,59;CL:0000559,2.99e-51,59;CL:0002009,2.40e-49,61;CL:0002031,4.36e-49,120;CL:0000988,1.74e-48,177;CL:0000839,4.44e-45,66;CL:0002032,6.30e-45,161;CL:0000837,6.30e-45,161;CL:0000557,2.66e-44,67;CL:0000763,9.92e-36,108;CL:0000049,9.92e-36,108;CL:0000134,6.34e-19,354;CL:0002320,2.40e-18,361;CL:0000219,2.60e-16,386;CL:0002393,7.01e-15,9;CL:0002397,7.01e-15,9;CL:0000034,7.35e-15,441;CL:0000048,8.08e-14,427;CL:0000723,1.78e-13,433;CL:0000775,8.13e-13,3;CL:0000094,1.35e-12,8;CL:0000623,3.00e-12,3;CL:0000825,3.00e-12,3;CL:0000784,1.99e-11,3;CL:0000624,1.06e-09,6;CL:0000771,2.72e-09,2;CL:0000081,4.74e-09,11;CL:0000838,5.05e-09,52;CL:0000791,6.78e-09,18;CL:0000789,6.78e-09,18;CL:0002420,6.78e-09,18;CL:0002419,6.78e-09,18;CL:0000790,6.78e-09,18;CL:0000542,8.42e-09,53;CL:0000051,8.42e-09,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-48;42!CL:0000049;6.04e-09;108!CL:0000790;6.91e-09;18 | |ontology_enrichment_development_v019=CL:0002057;5.05e-48;42!CL:0000049;6.04e-09;108!CL:0000790;6.91e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.81e-42!80;UBERON:0002390!6.33e-42!102;UBERON:0003061!6.33e-42!102;UBERON:0001474!6.63e-40!86;UBERON:0002193!9.13e-37!112;UBERON:0004765!2.21e-33!101;UBERON:0001434!2.21e-33!101;UBERON:0002405!1.20e-27!115;UBERON:0002384!3.64e-24!375;UBERON:0002204!2.28e-16!167;UBERON:0003081!6.29e-14!216 | |ontology_enrichment_uberon=UBERON:0002371!5.81e-42!80;UBERON:0002390!6.33e-42!102;UBERON:0003061!6.33e-42!102;UBERON:0001474!6.63e-40!86;UBERON:0002193!9.13e-37!112;UBERON:0004765!2.21e-33!101;UBERON:0001434!2.21e-33!101;UBERON:0002405!1.20e-27!115;UBERON:0002384!3.64e-24!375;UBERON:0002204!2.28e-16!167;UBERON:0003081!6.29e-14!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.27e-38,76;UBERON:0001474,6.90e-35,82;UBERON:0002390,8.34e-35,98;UBERON:0003061,8.34e-35,98;UBERON:0002405,4.24e-32,93;UBERON:0004765,3.87e-31,90;UBERON:0002193,7.63e-31,108;UBERON:0001434,2.73e-27,100;UBERON:0002384,1.47e-17,371;UBERON:0002204,2.12e-13,167;UBERON:0003081,1.13e-12,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.157421562627358,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0,0,0,0.293600439334847,24.9297933839345,50.7377452099458,39.2789675995692,0,0,0,0.436194716338694,0,1.4555043671269,1.62700325833979,1.6446715520873,1.54853185447552,1.1507695692886,1.0246428261164,3.54723344832878,7.23965929546899,0,9.47985406160392,0.941211697713023,0.818718450173537,1.34834090667051,12.549439587207,7.38136762275015,12.7867425159808,0.659702600373432,0.199463657621632,1.27867425159808,9.86711411337186,5.10646702222026,16.8162007228805,1.00499466102697,1.0429658368404,1.08594422352558,9.08099253950053,5.52416453981347,11.7091083353127,1.26753171787165,3.82687739937078,3.35453832813401,0.673971786878971,1.50176892841506,0.32145117339416,0,0.99458338599545,0.365328307529268,0,0,0,0.853460445133014,0,0,0,0,2.27685187643779,4.11066032559657,3.82273228125229,5.28685314316103,5.04457706683382,0,1.180258620683,3.53709686474248,3.90642848099067,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.226618685395132,1.53288197440768,0,0.506039384039006,0,0,0,0,0,0,0,0,3.02410114837099,6.15112450302067,2.75166367377318,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,1.43094374583205,4.57595928624102,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,42.6558290563158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.864719720501769,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5020150866636,8.19384784466166,8.85566950330264,0,0,0,0,0,23.9682247663098,11.966458368161,21.1351911852378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,14.2371372540287,10.7794833381479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.157421562627358,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0,0,0,0.293600439334847,24.9297933839345,50.7377452099458,39.2789675995692,0,0,0,0.436194716338694,0,1.4555043671269,1.62700325833979,1.6446715520873,1.54853185447552,1.1507695692886,1.0246428261164,3.54723344832878,7.23965929546899,0,9.47985406160392,0.941211697713023,0.818718450173537,1.34834090667051,12.549439587207,7.38136762275015,12.7867425159808,0.659702600373432,0.199463657621632,1.27867425159808,9.86711411337186,5.10646702222026,16.8162007228805,1.00499466102697,1.0429658368404,1.08594422352558,9.08099253950053,5.52416453981347,11.7091083353127,1.26753171787165,3.82687739937078,3.35453832813401,0.673971786878971,1.50176892841506,0.32145117339416,0,0.99458338599545,0.365328307529268,0,0,0,0.853460445133014,0,0,0,0,2.27685187643779,4.11066032559657,3.82273228125229,5.28685314316103,5.04457706683382,0,1.180258620683,3.53709686474248,3.90642848099067,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.226618685395132,1.53288197440768,0,0.506039384039006,0,0,0,0,0,0,0,0,3.02410114837099,6.15112450302067,2.75166367377318,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,1.43094374583205,4.57595928624102,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,42.6558290563158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.864719720501769,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5020150866636,8.19384784466166,8.85566950330264,0,0,0,0,0,23.9682247663098,11.966458368161,21.1351911852378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,14.2371372540287,10.7794833381479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:104154951..104154972,- | |short_description=p@chr10:104154951..104154972,- | ||
}} | }} |
Latest revision as of 09:45, 23 July 2015
Short description: | p@chr10:104154951..104154972, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104154951..104154972, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.27e-38 | 76 |
bone element | 6.90e-35 | 82 |
hematopoietic system | 8.34e-35 | 98 |
blood island | 8.34e-35 | 98 |
immune system | 4.24e-32 | 93 |
skeletal element | 3.87e-31 | 90 |
hemolymphoid system | 7.63e-31 | 108 |
skeletal system | 2.73e-27 | 100 |
connective tissue | 1.47e-17 | 371 |
musculoskeletal system | 2.12e-13 | 167 |
lateral plate mesoderm | 1.13e-12 | 203 |