FFCP PHASE1:Hg19::chr10:33247574..33247613,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_ENST00000450890_5end | |association_with_transcript=-159bp_to_ENST00000450890_5end | ||
|cluster_id=chr10:33247574..33247613,+ | |||
|description=CAGE_peak_3_at_ENST00000450890_5end | |description=CAGE_peak_3_at_ENST00000450890_5end | ||
|id=chr10:33247574..33247613,+ | |id=chr10:33247574..33247613,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.45e-11!246;CL:0002321!2.84e-11!248;CL:0002076!1.05e-09!43;CL:0000548!6.53e-09!679;CL:0000004!6.53e-09!679;CL:0000255!6.53e-09!679;CL:0000066!6.68e-09!254;CL:0000012!1.20e-08!682;CL:0000223!4.22e-08!59 | |ontology_enrichment_celltype=CL:0000220!1.45e-11!246;CL:0002321!2.84e-11!248;CL:0002076!1.05e-09!43;CL:0000548!6.53e-09!679;CL:0000004!6.53e-09!679;CL:0000255!6.53e-09!679;CL:0000066!6.68e-09!254;CL:0000012!1.20e-08!682;CL:0000223!4.22e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002328;2.20e-25;3!CL:0002202;7.80e-23;9!CL:0002632;7.80e-23;9!CL:0002368;1.28e-22;13!CL:0000746;2.76e-12;3!CL:0000307;5.26e-12;3!CL:0000313;1.25e-09;1!CL:0000737;1.95e-09;4!CL:0002539;3.96e-08;10!CL:0002076;1.66e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,9.55e-26,3;CL:0002202,6.84e-23,9;CL:0002632,6.84e-23,9;CL:0002368,1.12e-22,13;CL:0000746,2.69e-12,3;CL:0000513,2.69e-12,3;CL:0000068,7.78e-12,3;CL:0000069,7.78e-12,3;CL:0000307,7.78e-12,3;CL:0000377,7.78e-12,3;CL:0002076,1.12e-11,42;CL:0000223,2.61e-10,58;CL:0000737,1.92e-09,4;CL:0000313,2.08e-09,1;CL:0002539,3.64e-08,10;CL:0002321,1.36e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000513;2.76e-12;3!CL:0000377;5.26e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.08e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!4.59e-07!35;UBERON:0001004!6.73e-07!72 | |ontology_enrichment_uberon=UBERON:0000161!4.59e-07!35;UBERON:0001004!6.73e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.20e-25;3!UBERON:0002031;2.20e-25;3!UBERON:0002185;1.73e-15;5!UBERON:0007196;1.14e-13;15!UBERON:0001558;1.14e-13;15!UBERON:0000485;3.18e-11;7!UBERON:0004911;1.25e-09;1!UBERON:0004237;3.96e-08;10!UBERON:0004695;3.96e-08;10!UBERON:0002111;3.96e-08;10!UBERON:0004178;3.96e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,9.55e-26,3;UBERON:0002031,9.55e-26,3;UBERON:0002185,1.05e-15,5;UBERON:0007196,1.05e-13,15;UBERON:0001558,1.05e-13,15;UBERON:0004911,2.08e-09,1;UBERON:0000485,5.83e-09,9;UBERON:0004237,3.64e-08,10;UBERON:0004695,3.64e-08,10;UBERON:0002111,3.64e-08,10;UBERON:0004178,3.64e-08,10 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0,0,0,2.01697543935533,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.204823675113,1.84877005083394,0.232401601740905,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0.728590576585084,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,5.29636723252875,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0.423863802319124,1.50045548042201,0,0,0,1.5189869901714,0.194874010322397,0,0,0,1.06502877754984,0,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.219500570817251,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.503946384596579,0.283550194484773,0.0895585227028483,0.871901815541886,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0.336393253036082,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.40101294060657,0,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,2.55225424989168,0,0,1.88887408098384,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,1.27281299170375,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0.288666338176536,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,1.21390189767046,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.174118413160805,0.17472666824203,0.687944129886466,0,0,0.164230914106418,0,0.441280633457501,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.372757606696298,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0.542999601753713,0,0.326587360109409,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0.604923695052956,0,0.147855149989634,0.318593534327405,1.34940933649081,0,0.414706207840855,0,0.521745061811734,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.687034029507179,1.06172751012966,0.183428598521679,0.231051332300676,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,2.76503864725637,0,0.236664001461131,0.0852134047591577,0,0,0,0,1.11855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0.37199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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0,0,0,2.01697543935533,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.204823675113,1.84877005083394,0.232401601740905,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0.728590576585084,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,5.29636723252875,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0.423863802319124,1.50045548042201,0,0,0,1.5189869901714,0.194874010322397,0,0,0,1.06502877754984,0,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.219500570817251,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.503946384596579,0.283550194484773,0.0895585227028483,0.871901815541886,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0.336393253036082,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.40101294060657,0,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,2.55225424989168,0,0,1.88887408098384,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,1.27281299170375,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0.288666338176536,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,1.21390189767046,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.174118413160805,0.17472666824203,0.687944129886466,0,0,0.164230914106418,0,0.441280633457501,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.372757606696298,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0.542999601753713,0,0.326587360109409,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0.604923695052956,0,0.147855149989634,0.318593534327405,1.34940933649081,0,0.414706207840855,0,0.521745061811734,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.687034029507179,1.06172751012966,0.183428598521679,0.231051332300676,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.414432328326074,0,2.76503864725637,0,0.236664001461131,0.0852134047591577,0,0,0,0,1.11855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0.37199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| ||
|short_description=p3@ENST00000450890 | |short_description=p3@ENST00000450890 | ||
}} | }} |
Latest revision as of 13:20, 23 July 2015
Short description: | p3@ENST00000450890 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000450890_5end |
Coexpression cluster: | NA |
Association with transcript: | -159bp_to_ENST00000450890_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 9.55e-26 | 3 |
epithelial cell of tracheobronchial tree | 6.84e-23 | 9 |
epithelial cell of lower respiratory tract | 6.84e-23 | 9 |
respiratory epithelial cell | 1.12e-22 | 13 |
cardiac muscle cell | 2.69e-12 | 3 |
cardiac muscle myoblast | 2.69e-12 | 3 |
duct epithelial cell | 7.78e-12 | 3 |
branched duct epithelial cell | 7.78e-12 | 3 |
tracheal epithelial cell | 7.78e-12 | 3 |
tracheoblast | 7.78e-12 | 3 |
endo-epithelial cell | 1.12e-11 | 42 |
endodermal cell | 2.61e-10 | 58 |
striated muscle cell | 1.92e-09 | 4 |
serous secreting cell | 2.08e-09 | 1 |
aortic smooth muscle cell | 3.64e-08 | 10 |
embryonic cell | 1.36e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 9.55e-26 | 3 |
epithelium of bronchus | 9.55e-26 | 3 |
bronchus | 1.05e-15 | 5 |
tracheobronchial tree | 1.05e-13 | 15 |
lower respiratory tract | 1.05e-13 | 15 |
epithelium of female gonad | 2.08e-09 | 1 |
simple columnar epithelium | 5.83e-09 | 9 |
blood vessel smooth muscle | 3.64e-08 | 10 |
arterial system smooth muscle | 3.64e-08 | 10 |
artery smooth muscle tissue | 3.64e-08 | 10 |
aorta smooth muscle tissue | 3.64e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.08e-09 | 1 |