FFCP PHASE1:Hg19::chr10:9062678..9062682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:9062678..9062682,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr10:9062678..9062682,- | |description=CAGE_peak_at_chr10:9062678..9062682,- | ||
|id=chr10:9062678..9062682,- | |id=chr10:9062678..9062682,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.17e-08;3!CL:0002178;1.17e-08;3!CL:0002327;6.49e-07;4!CL:0000083;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,9.66e-09,3;CL:0002178,1.30e-08,3;CL:0002327,6.50e-07,4;CL:0000083,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1!UBERON:0005425;2.93e-23;1!UBERON:0006215;1.17e-08;3!UBERON:0003056;1.17e-08;3 | |||
|ontology_enrichment_disease=DOID:305!4.89e-10!106;DOID:5093!1.66e-08!4;DOID:1612!1.66e-08!4;DOID:1325!2.28e-07!7;DOID:3904!2.28e-07!7;DOID:1324!6.47e-07!15;DOID:0050687!8.36e-07!143 | |ontology_enrichment_disease=DOID:305!4.89e-10!106;DOID:5093!1.66e-08!4;DOID:1612!1.66e-08!4;DOID:1325!2.28e-07!7;DOID:3904!2.28e-07!7;DOID:1324!6.47e-07!15;DOID:0050687!8.36e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.88e-23;4!DOID:1612;3.88e-23;4!DOID:4074;2.45e-12;2!DOID:4905;2.45e-12;2!DOID:3910;2.45e-12;2!DOID:3498;2.45e-12;2!DOID:1793;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.63e-23,4;DOID:1612,2.63e-23,4;DOID:3910,1.85e-12,2;DOID:4074,2.07e-12,2;DOID:4905,2.07e-12,2;DOID:3498,2.07e-12,2;DOID:305,1.69e-07,106;DOID:1793,7.70e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.93e-23;1!UBERON:0001785;2.93e-23;1!UBERON:0002464;2.93e-23;1!UBERON:0004904;2.93e-23;1!UBERON:0001021;2.93e-23;1!UBERON:0006562;2.45e-12;2!UBERON:0004903;2.45e-12;2!UBERON:0003714;2.45e-12;2!UBERON:0005162;2.45e-12;2!UBERON:0000122;2.45e-12;2!UBERON:0002173;2.45e-12;2!UBERON:0002186;2.45e-12;2!UBERON:0000310;7.24e-10;10!UBERON:0001443;4.70e-09;11!UBERON:0004821;1.17e-08;3!UBERON:0007499;1.17e-08;3!UBERON:0003215;1.17e-08;3!UBERON:0010368;1.17e-08;3!UBERON:0009911;1.17e-08;3!UBERON:0002299;1.17e-08;3!UBERON:0006524;1.17e-08;3!UBERON:0008874;1.17e-08;3!UBERON:0002169;1.17e-08;3!UBERON:0004894;1.17e-08;3!UBERON:0004732;9.84e-08;13!UBERON:0001911;6.49e-07;4!UBERON:0009856;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0004903,1.85e-12,2;UBERON:0002173,1.85e-12,2;UBERON:0002186,1.85e-12,2;UBERON:0003714,2.59e-12,2;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0000310,6.20e-10,10;UBERON:0001443,4.08e-09,11;UBERON:0004821,9.66e-09,3;UBERON:0003215,9.66e-09,3;UBERON:0010368,9.66e-09,3;UBERON:0009911,9.66e-09,3;UBERON:0002299,9.66e-09,3;UBERON:0006524,9.66e-09,3;UBERON:0008874,9.66e-09,3;UBERON:0002169,9.66e-09,3;UBERON:0004894,9.66e-09,3;UBERON:0004732,9.84e-08,13;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001781,8.61e-07,4 | |||
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| ||
|short_description=p@chr10:9062678..9062682,- | |short_description=p@chr10:9062678..9062682,- | ||
}} | }} |
Latest revision as of 16:29, 23 July 2015
Short description: | p@chr10:9062678..9062682, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:9062678..9062682, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 9.66e-09 | 3 |
epithelial cell of stomach | 1.30e-08 | 3 |
mammary gland epithelial cell | 6.50e-07 | 4 |
epithelial cell of pancreas | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.28e-23 | 1 |
cranial nerve | 3.28e-23 | 1 |
nerve trunk | 3.28e-23 | 1 |
nerve connecting eye with brain | 3.28e-23 | 1 |
nerve | 3.28e-23 | 1 |
retinal neural layer | 3.28e-23 | 1 |
presumptive neural retina | 3.28e-23 | 1 |
bronchoalveolar duct junction | 1.85e-12 | 2 |
alveolar duct | 1.85e-12 | 2 |
bronchiole | 1.85e-12 | 2 |
neural tissue | 2.59e-12 | 2 |
multi cell component structure | 2.59e-12 | 2 |
neuron projection bundle | 2.59e-12 | 2 |
breast | 6.20e-10 | 10 |
chest | 4.08e-09 | 11 |
pulmonary alveolus epithelium | 9.66e-09 | 3 |
alveolus | 9.66e-09 | 3 |
pulmonary lobule | 9.66e-09 | 3 |
lobule | 9.66e-09 | 3 |
alveolus of lung | 9.66e-09 | 3 |
alveolar system | 9.66e-09 | 3 |
pulmonary acinus | 9.66e-09 | 3 |
alveolar sac | 9.66e-09 | 3 |
alveolar wall | 9.66e-09 | 3 |
segmental subdivision of nervous system | 9.84e-08 | 13 |
mammary gland | 6.50e-07 | 4 |
mammary bud | 6.50e-07 | 4 |
mammary ridge | 6.50e-07 | 4 |
mammary placode | 6.50e-07 | 4 |
layer of retina | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.63e-23 | 4 |
breast cancer | 2.63e-23 | 4 |
lung adenocarcinoma | 1.85e-12 | 2 |
pancreas adenocarcinoma | 2.07e-12 | 2 |
pancreatic carcinoma | 2.07e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.07e-12 | 2 |
carcinoma | 1.69e-07 | 106 |
pancreatic cancer | 7.70e-07 | 4 |