FFCP PHASE1:Hg19::chr11:120110546..120110551,-: Difference between revisions
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|id=chr11:120110546..120110551,-
|short_description=p@chr11:120110546..120110551,-
|description=CAGE_peak_at_chr11:120110546..120110551,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:120110546..120110551,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr11:120110546..120110551,- | |||
|id=chr11:120110546..120110551,- | |||
|ontology_enrichment_celltype=CL:0002322!5.50e-09!5;CL:0002327!2.26e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000307;2.18e-38;3!CL:0002174;2.05e-29;1!CL:0000501;2.05e-29;1!CL:0002253;1.91e-15;2!CL:0002202;1.49e-13;9!CL:0002632;1.49e-13;9!CL:0000174;9.43e-11;3!CL:0000346;9.43e-11;3!CL:1000428;9.43e-11;3!CL:0002368;1.08e-09;13!CL:0002327;1.70e-08;4!CL:0002563;2.18e-08;4!CL:0002559;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.64e-38,3;CL:0000069,2.64e-38,3;CL:0000307,2.64e-38,3;CL:0000377,2.64e-38,3;CL:0002174,2.37e-29,1;CL:0000501,2.37e-29,1;CL:0002253,2.37e-15,2;CL:0002202,1.58e-13,9;CL:0002632,1.58e-13,9;CL:0000346,7.42e-11,3;CL:1000428,7.42e-11,3;CL:0000174,9.90e-11,3;CL:0002368,1.13e-09,13;CL:0002327,1.70e-08,4;CL:0002563,2.43e-08,4;CL:0002559,5.08e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;2.18e-38;3!UBERON:0008425;7.47e-30;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.30e-13!143;DOID:162!7.88e-12!235;DOID:14566!2.31e-11!239;DOID:305!5.58e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.70e-08;4!DOID:1612;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.70e-08,4;DOID:1612,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001723!2.82e-09!3;UBERON:0001033!2.82e-09!3;UBERON:0010056!2.82e-09!3;UBERON:0001911!2.26e-07!4;UBERON:0005333!2.26e-07!4;UBERON:0008425!2.26e-07!4;UBERON:0005311!2.26e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;4.02e-17;7!UBERON:0001005;4.02e-17;7!UBERON:0000412;9.43e-11;3!UBERON:0001992;9.43e-11;3!UBERON:0007196;1.59e-08;15!UBERON:0001558;1.59e-08;15!UBERON:0001911;1.70e-08;4!UBERON:0001052;2.18e-08;4!UBERON:0001242;2.18e-08;4!UBERON:0001262;2.18e-08;4!UBERON:0004786;2.18e-08;4!UBERON:0004808;2.18e-08;4!UBERON:0001277;2.18e-08;4!UBERON:0002073;5.86e-07;5!UBERON:0004907;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.36e-17,7;UBERON:0001005,4.36e-17,7;UBERON:0000412,7.42e-11,3;UBERON:0001992,7.42e-11,3;UBERON:0007196,1.65e-08,15;UBERON:0001558,1.65e-08,15;UBERON:0001911,1.70e-08,4;UBERON:0005333,1.70e-08,4;UBERON:0008425,1.70e-08,4;UBERON:0005311,1.70e-08,4;UBERON:0001052,2.43e-08,4;UBERON:0001242,2.43e-08,4;UBERON:0001262,2.43e-08,4;UBERON:0004786,2.43e-08,4;UBERON:0004808,2.43e-08,4;UBERON:0001277,2.43e-08,4;UBERON:0002073,5.08e-07,5;UBERON:0005086,5.08e-07,5;UBERON:0004907,6.39e-07,5 | |||
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| ||
|short_description=p@chr11:120110546..120110551,- | |||
}} | }} |
Latest revision as of 19:06, 23 July 2015
Short description: | p@chr11:120110546..120110551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:120110546..120110551, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.64e-38 | 3 |
branched duct epithelial cell | 2.64e-38 | 3 |
tracheal epithelial cell | 2.64e-38 | 3 |
tracheoblast | 2.64e-38 | 3 |
follicular cell of ovary | 2.37e-29 | 1 |
granulosa cell | 2.37e-29 | 1 |
epithelial cell of large intestine | 2.37e-15 | 2 |
epithelial cell of tracheobronchial tree | 1.58e-13 | 9 |
epithelial cell of lower respiratory tract | 1.58e-13 | 9 |
hair follicle dermal papilla cell | 7.42e-11 | 3 |
stem cell of epidermis | 7.42e-11 | 3 |
steroid hormone secreting cell | 9.90e-11 | 3 |
respiratory epithelial cell | 1.13e-09 | 13 |
mammary gland epithelial cell | 1.70e-08 | 4 |
intestinal epithelial cell | 2.43e-08 | 4 |
hair follicle cell | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.36e-17 | 7 |
respiratory airway | 4.36e-17 | 7 |
dermal papilla | 7.42e-11 | 3 |
papillary layer of dermis | 7.42e-11 | 3 |
tracheobronchial tree | 1.65e-08 | 15 |
lower respiratory tract | 1.65e-08 | 15 |
mammary gland | 1.70e-08 | 4 |
mammary bud | 1.70e-08 | 4 |
mammary ridge | 1.70e-08 | 4 |
mammary placode | 1.70e-08 | 4 |
rectum | 2.43e-08 | 4 |
intestinal mucosa | 2.43e-08 | 4 |
wall of intestine | 2.43e-08 | 4 |
gastrointestinal system mucosa | 2.43e-08 | 4 |
gastrointestinal system epithelium | 2.43e-08 | 4 |
intestinal epithelium | 2.43e-08 | 4 |
hair follicle | 5.08e-07 | 5 |
hair follicle placode | 5.08e-07 | 5 |
lower digestive tract | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.70e-08 | 4 |
breast cancer | 1.70e-08 | 4 |