FFCP PHASE1:Hg19::chr12:52908517..52908524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52908517..52908524,- | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52908517..52908524,- | |description=CAGE_peak_at_chr12:52908517..52908524,- | ||
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|ontology_enrichment_celltype=CL:0002076!4.86e-32!43;CL:0000223!1.28e-21!59;CL:0002251!2.16e-18!21;CL:0002368!4.18e-18!13;CL:0000066!1.16e-16!254;CL:0002159!1.60e-14!13;CL:0000076!8.69e-13!62;CL:0000622!6.38e-11!5;CL:0002623!1.45e-10!3;CL:0002621!4.85e-10!3;CL:0002328!6.97e-10!3;CL:0000240!3.40e-09!6;CL:0000311!3.40e-09!6;CL:0000079!3.40e-09!6;CL:0000237!3.40e-09!6;CL:0000036!3.40e-09!6;CL:0000357!3.40e-09!6;CL:0000114!3.40e-09!6;CL:0000154!4.35e-09!6;CL:0002202!1.60e-08!9;CL:0002632!1.60e-08!9;CL:0000575!1.63e-07!2;CL:0002327!2.33e-07!4;CL:0000244!5.66e-07!4;CL:0000731!5.66e-07!4;CL:0000362!6.11e-07!8 | |ontology_enrichment_celltype=CL:0002076!4.86e-32!43;CL:0000223!1.28e-21!59;CL:0002251!2.16e-18!21;CL:0002368!4.18e-18!13;CL:0000066!1.16e-16!254;CL:0002159!1.60e-14!13;CL:0000076!8.69e-13!62;CL:0000622!6.38e-11!5;CL:0002623!1.45e-10!3;CL:0002621!4.85e-10!3;CL:0002328!6.97e-10!3;CL:0000240!3.40e-09!6;CL:0000311!3.40e-09!6;CL:0000079!3.40e-09!6;CL:0000237!3.40e-09!6;CL:0000036!3.40e-09!6;CL:0000357!3.40e-09!6;CL:0000114!3.40e-09!6;CL:0000154!4.35e-09!6;CL:0002202!1.60e-08!9;CL:0002632!1.60e-08!9;CL:0000575!1.63e-07!2;CL:0002327!2.33e-07!4;CL:0000244!5.66e-07!4;CL:0000731!5.66e-07!4;CL:0000362!6.11e-07!8 | ||
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|ontology_enrichment_development_v019=CL:0000357;4.27e-20;6!CL:0000114;4.27e-20;6!CL:0000223;2.35e-14;58!CL:0000377;1.55e-10;3 | |ontology_enrichment_development_v019=CL:0000357;4.27e-20;6!CL:0000114;4.27e-20;6!CL:0000223;2.35e-14;58!CL:0000377;1.55e-10;3 | ||
|ontology_enrichment_disease=DOID:1749!7.88e-19!14 | |ontology_enrichment_disease=DOID:1749!7.88e-19!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.46e-08;1!DOID:3149;2.46e-08;1 | |ontology_enrichment_disease_v019=DOID:3151;2.46e-08;1!DOID:3149;2.46e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.59e-08,1;DOID:3149,1.59e-08,1 | |||
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| ||
|short_description=p@chr12:52908517..52908524,- | |short_description=p@chr12:52908517..52908524,- | ||
}} | }} |
Latest revision as of 09:34, 24 July 2015
Short description: | p@chr12:52908517..52908524, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52908517..52908524, - |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oral opening | 1.00e-19 | 22 |
mouth | 1.27e-18 | 29 |
stomodeum | 1.27e-18 | 29 |
surface structure | 7.26e-18 | 99 |
respiratory system | 3.28e-16 | 74 |
subdivision of head | 9.64e-16 | 49 |
orifice | 9.32e-15 | 36 |
head | 1.55e-13 | 56 |
anterior region of body | 4.85e-12 | 62 |
craniocervical region | 4.85e-12 | 62 |
saliva-secreting gland | 1.74e-11 | 6 |
gland of oral region | 1.74e-11 | 6 |
gland of foregut | 1.74e-11 | 6 |
oral gland | 1.74e-11 | 6 |
oral cavity | 1.74e-11 | 6 |
tongue | 1.79e-10 | 3 |
gustatory system | 1.79e-10 | 3 |
future tongue | 1.79e-10 | 3 |
gingival epithelium | 1.97e-10 | 3 |
endoderm-derived structure | 1.55e-09 | 160 |
endoderm | 1.55e-09 | 160 |
presumptive endoderm | 1.55e-09 | 160 |
mouth mucosa | 5.33e-09 | 13 |
skin epidermis | 3.31e-08 | 15 |
outer epithelium | 3.31e-08 | 15 |
enveloping layer of ectoderm | 3.31e-08 | 15 |
cornea | 4.08e-08 | 4 |
eye surface | 4.08e-08 | 4 |
optic eminence | 4.08e-08 | 4 |
corneal primordium | 4.08e-08 | 4 |
ectoderm-derived structure | 1.50e-07 | 171 |
ectoderm | 1.50e-07 | 171 |
presumptive ectoderm | 1.50e-07 | 171 |
respiratory tract | 2.47e-07 | 54 |
gland of gut | 4.46e-07 | 10 |
digestive system | 5.92e-07 | 145 |
digestive tract | 5.92e-07 | 145 |
primitive gut | 5.92e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.59e-08 | 1 |
keratoacanthoma | 1.59e-08 | 1 |