FFCP PHASE1:Hg19::chr13:32835894..32835907,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:32835894..32835907,+ | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr13:32835894..32835907,+ | |description=CAGE_peak_at_chr13:32835894..32835907,+ | ||
|id=chr13:32835894..32835907,+ | |id=chr13:32835894..32835907,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.95e-48!35;CL:0002139!3.12e-47!24;CL:0002078!8.30e-39!44;CL:0000071!3.17e-36!18;CL:0002546!3.17e-36!18;CL:0000213!1.44e-27!57;CL:0000215!1.44e-27!57;CL:1000413!1.29e-18!9;CL:0002543!1.26e-13!6;CL:0000222!4.03e-13!119;CL:0002544!4.45e-13!6;CL:0005020!1.79e-12!6;CL:0002138!1.79e-12!6;CL:0005022!1.79e-12!6;CL:0002618!1.05e-07!3;CL:1000612!2.72e-07!7;CL:1000746!2.72e-07!7;CL:0002144!3.06e-07!3 | |ontology_enrichment_celltype=CL:0000115!1.95e-48!35;CL:0002139!3.12e-47!24;CL:0002078!8.30e-39!44;CL:0000071!3.17e-36!18;CL:0002546!3.17e-36!18;CL:0000213!1.44e-27!57;CL:0000215!1.44e-27!57;CL:1000413!1.29e-18!9;CL:0002543!1.26e-13!6;CL:0000222!4.03e-13!119;CL:0002544!4.45e-13!6;CL:0005020!1.79e-12!6;CL:0002138!1.79e-12!6;CL:0005022!1.79e-12!6;CL:0002618!1.05e-07!3;CL:1000612!2.72e-07!7;CL:1000746!2.72e-07!7;CL:0002144!3.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.37e-111;24!CL:0000115;1.98e-98;36!CL:0000071;2.83e-92;18!CL:0002078;9.22e-59;45!CL:1000413;5.18e-46;9!CL:0000213;2.15e-42;58!CL:0000215;2.15e-42;58!CL:0002543;6.07e-33;6!CL:0002544;1.69e-31;6!CL:0002138;3.29e-21;6!CL:0002618;1.74e-17;3!CL:0002188;8.83e-17;5!CL:0002144;2.77e-16;3!CL:0000076;1.45e-14;63!CL:1000746;4.98e-12;7!CL:1000612;4.98e-12;7!CL:0002262;1.12e-11;2!CL:1000398;1.12e-11;2!CL:0002545;1.39e-11;2!CL:0002681;4.73e-07;12!CL:0002584;4.73e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.23e-117,36;CL:0002139,1.31e-111,24;CL:0002078,1.06e-92,45;CL:0000071,3.62e-92,18;CL:0002546,3.62e-92,18;CL:0000213,1.45e-70,58;CL:0000215,1.45e-70,58;CL:1000413,6.08e-46,9;CL:0002543,6.77e-33,6;CL:0002544,1.83e-31,6;CL:0000222,1.27e-30,121;CL:0000076,2.10e-23,63;CL:0005020,2.60e-21,6;CL:0002138,2.60e-21,6;CL:0005022,2.60e-21,6;CL:0002618,1.70e-17,3;CL:0002188,6.49e-17,5;CL:0002144,2.70e-16,3;CL:0002321,1.61e-12,250;CL:0000066,1.84e-12,253;CL:1000746,4.01e-12,7;CL:1000612,4.01e-12,7;CL:0002262,1.04e-11,2;CL:1000398,1.04e-11,2;CL:0002545,1.28e-11,2;CL:0002681,4.18e-07,12;CL:0002584,4.18e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.83e-92;18!CL:0005022;3.29e-21;6!CL:0000222;2.64e-13;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.17e-36!18;UBERON:0004638!3.17e-36!18;UBERON:0004852!3.17e-36!18;UBERON:0000487!1.57e-28!22;UBERON:0006914!5.63e-27!25;UBERON:0000055!1.01e-20!69;UBERON:0002049!1.76e-19!79;UBERON:0007798!1.76e-19!79;UBERON:0003915!1.29e-18!9;UBERON:0004700!1.29e-18!9;UBERON:0001917!1.29e-18!9;UBERON:0001009!1.06e-17!113;UBERON:0004535!2.26e-17!110;UBERON:0004111!4.73e-15!241;UBERON:0004872!9.74e-15!84;UBERON:0003914!4.39e-14!118;UBERON:0001981!1.03e-13!60;UBERON:0007500!1.03e-13!60;UBERON:0004537!1.03e-13!60;UBERON:0006965!1.03e-13!60;UBERON:0000119!2.09e-13!312;UBERON:0000477!1.49e-12!286;UBERON:0001473!3.37e-12!8;UBERON:0004536!3.37e-12!8;UBERON:0006558!3.37e-12!8;UBERON:0002465!6.70e-12!10;UBERON:0000483!8.40e-12!309;UBERON:0000025!2.22e-11!194;UBERON:0001638!4.10e-11!9;UBERON:0003920!4.10e-11!9;UBERON:0004582!4.10e-11!9;UBERON:0000490!1.67e-08!138;UBERON:0000074!2.72e-07!7;UBERON:0001229!2.72e-07!7;UBERON:0001230!2.72e-07!7;UBERON:0005749!2.72e-07!7;UBERON:0004199!2.72e-07!7;UBERON:0004209!2.72e-07!7;UBERON:0004198!2.72e-07!7;UBERON:0001915!3.06e-07!3;UBERON:0001982!3.06e-07!3;UBERON:0002066!5.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.83e-92;18!UBERON:0001986;2.83e-92;18!UBERON:0004852;2.83e-92;18!UBERON:0000487;9.27e-75;22!UBERON:0006914;2.67e-65;25!UBERON:0003915;5.18e-46;9!UBERON:0004700;5.18e-46;9!UBERON:0001917;5.18e-46;9!UBERON:0000490;2.04e-44;33!UBERON:0000055;4.38e-24;65!UBERON:0001638;9.00e-22;9!UBERON:0003920;9.00e-22;9!UBERON:0004582;9.00e-22;9!UBERON:0007500;1.03e-20;56!UBERON:0001981;1.03e-20;56!UBERON:0004537;1.03e-20;56!UBERON:0003914;1.31e-16;74!UBERON:0010523;2.77e-16;3!UBERON:0001915;2.77e-16;3!UBERON:0001982;2.77e-16;3!UBERON:0002049;4.96e-16;75!UBERON:0007798;4.96e-16;75!UBERON:0001473;7.27e-16;8!UBERON:0004536;7.27e-16;8!UBERON:0006558;7.27e-16;8!UBERON:0000025;4.11e-14;93!UBERON:0002465;1.19e-12;10!UBERON:0000074;4.98e-12;7!UBERON:0001229;4.98e-12;7!UBERON:0000353;5.27e-12;15!UBERON:0001009;6.05e-12;112!UBERON:0001281;1.12e-11;2!UBERON:0003497;1.12e-11;2!UBERON:0003909;1.12e-11;2!UBERON:0003835;1.12e-11;2!UBERON:0005800;1.39e-11;2!UBERON:0001515;1.39e-11;2!UBERON:0004535;1.39e-11;109!UBERON:0002066;1.12e-10;5!UBERON:0004111;2.94e-09;130!UBERON:0000947;1.40e-08;21!UBERON:0010191;1.40e-08;21!UBERON:0001637;1.46e-08;42!UBERON:0003509;1.46e-08;42!UBERON:0004572;1.46e-08;42!UBERON:0001280;4.62e-08;3!UBERON:0004647;4.62e-08;3!UBERON:0001225;4.73e-07;12!UBERON:0008987;4.73e-07;12!UBERON:0000119;7.54e-07;139 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.62e-92,18;UBERON:0001986,3.62e-92,18;UBERON:0004852,3.62e-92,18;UBERON:0000487,1.13e-74,22;UBERON:0006914,3.18e-65,25;UBERON:0000055,7.80e-47,68;UBERON:0003915,6.08e-46,9;UBERON:0004700,6.08e-46,9;UBERON:0001917,6.08e-46,9;UBERON:0002049,4.25e-40,78;UBERON:0007798,4.25e-40,78;UBERON:0007500,5.39e-35,59;UBERON:0001981,5.39e-35,59;UBERON:0004537,5.39e-35,59;UBERON:0006965,5.39e-35,59;UBERON:0004535,7.62e-32,109;UBERON:0001009,7.88e-31,112;UBERON:0004872,1.55e-28,83;UBERON:0003914,5.20e-27,117;UBERON:0001638,9.67e-22,9;UBERON:0003920,9.67e-22,9;UBERON:0004582,9.67e-22,9;UBERON:0004111,7.70e-20,240;UBERON:0000025,3.58e-18,192;UBERON:0010523,2.70e-16,3;UBERON:0001915,2.70e-16,3;UBERON:0001982,2.70e-16,3;UBERON:0001473,6.11e-16,8;UBERON:0004536,6.11e-16,8;UBERON:0006558,6.11e-16,8;UBERON:0003081,5.56e-13,203;UBERON:0002465,1.04e-12,10;UBERON:0000490,2.24e-12,148;UBERON:0010532,4.01e-12,7;UBERON:0000074,4.01e-12,7;UBERON:0001229,4.01e-12,7;UBERON:0001230,4.01e-12,7;UBERON:0003220,4.01e-12,7;UBERON:0005749,4.01e-12,7;UBERON:0004199,4.01e-12,7;UBERON:0004209,4.01e-12,7;UBERON:0004198,4.01e-12,7;UBERON:0000353,4.41e-12,15;UBERON:0000483,7.88e-12,306;UBERON:0001281,1.04e-11,2;UBERON:0003497,1.04e-11,2;UBERON:0003909,1.04e-11,2;UBERON:0003835,1.04e-11,2;UBERON:0000119,1.19e-11,309;UBERON:0005800,1.28e-11,2;UBERON:0001515,1.28e-11,2;UBERON:0002066,1.10e-10,5;UBERON:0005103,1.27e-10,8;UBERON:0000083,1.27e-10,8;UBERON:0009201,1.27e-10,8;UBERON:0006553,1.27e-10,8;UBERON:0003074,1.27e-10,8;UBERON:0003060,1.27e-10,8;UBERON:0000080,1.88e-09,9;UBERON:0002120,1.88e-09,9;UBERON:0004875,1.88e-09,9;UBERON:0005721,1.88e-09,9;UBERON:0005754,1.88e-09,9;UBERON:0007297,1.88e-09,9;UBERON:0000058,2.06e-09,19;UBERON:0001637,1.24e-08,42;UBERON:0003509,1.24e-08,42;UBERON:0004572,1.24e-08,42;UBERON:0000947,1.43e-08,21;UBERON:0010191,1.43e-08,21;UBERON:0001280,4.38e-08,3;UBERON:0004647,4.38e-08,3;UBERON:0005171,4.38e-08,3;UBERON:0000926,8.37e-08,315;UBERON:0004120,8.37e-08,315;UBERON:0006603,8.37e-08,315;UBERON:0004876,9.56e-08,11;UBERON:0001225,4.18e-07,12;UBERON:0008987,4.18e-07,12;UBERON:0003887,4.18e-07,12 | |||
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|short_description=p@chr13:32835894..32835907,+ | |short_description=p@chr13:32835894..32835907,+ | ||
}} | }} |
Latest revision as of 15:40, 24 July 2015
Short description: | p@chr13:32835894..32835907, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:32835894..32835907, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.23e-117 | 36 |
endothelial cell of vascular tree | 1.31e-111 | 24 |
meso-epithelial cell | 1.06e-92 | 45 |
blood vessel endothelial cell | 3.62e-92 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.62e-92 | 18 |
lining cell | 1.45e-70 | 58 |
barrier cell | 1.45e-70 | 58 |
endothelial cell of artery | 6.08e-46 | 9 |
vein endothelial cell | 6.77e-33 | 6 |
aortic endothelial cell | 1.83e-31 | 6 |
mesodermal cell | 1.27e-30 | 121 |
squamous epithelial cell | 2.10e-23 | 63 |
lymphangioblast | 2.60e-21 | 6 |
endothelial cell of lymphatic vessel | 2.60e-21 | 6 |
vascular lymphangioblast | 2.60e-21 | 6 |
endothelial cell of umbilical vein | 1.70e-17 | 3 |
glomerular endothelial cell | 6.49e-17 | 5 |
capillary endothelial cell | 2.70e-16 | 3 |
embryonic cell | 1.61e-12 | 250 |
epithelial cell | 1.84e-12 | 253 |
glomerular cell | 4.01e-12 | 7 |
kidney corpuscule cell | 4.01e-12 | 7 |
endothelial cell of sinusoid | 1.04e-11 | 2 |
endothelial cell of hepatic sinusoid | 1.04e-11 | 2 |
thoracic aorta endothelial cell | 1.28e-11 | 2 |
kidney cortical cell | 4.18e-07 | 12 |
renal cortical epithelial cell | 4.18e-07 | 12 |