FFCP PHASE1:Hg19::chr13:44272206..44272244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:44272206..44272244,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr13:44272206..44272244,- | |description=CAGE_peak_at_chr13:44272206..44272244,- | ||
|id=chr13:44272206..44272244,- | |id=chr13:44272206..44272244,- | ||
|ontology_enrichment_celltype=CL:0000990!2.04e-17!8;CL:0000451!4.75e-14!10;CL:0000453!9.49e-12!5;CL:0000840!1.33e-08!5;CL:0001029!1.33e-08!5 | |ontology_enrichment_celltype=CL:0000990!2.04e-17!8;CL:0000451!4.75e-14!10;CL:0000453!9.49e-12!5;CL:0000840!1.33e-08!5;CL:0001029!1.33e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;9.01e-33;5!CL:0000990;2.35e-18;8!CL:0000451;4.57e-15;10!CL:0002393;1.86e-07;6!CL:0002397;1.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.40e-33,5;CL:0000990,2.40e-18,8;CL:0000451,4.66e-15,10;CL:0000988,2.44e-10,177;CL:0000738,1.28e-08,136;CL:0000860,5.42e-08,42;CL:0002057,5.42e-08,42;CL:0000763,1.11e-07,108;CL:0000049,1.11e-07,108;CL:0002009,4.75e-07,61;CL:0002032,5.32e-07,161;CL:0000837,5.32e-07,161;CL:0000473,6.12e-07,48;CL:0000234,6.12e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.07e-11;1!UBERON:0005425;3.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.78e-11;1!DOID:0060061;1.78e-11;1!DOID:8691;1.78e-11;1!DOID:630;2.07e-11;1!DOID:0050177;2.07e-11;1!DOID:0050427;2.07e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.78e-11,1;DOID:0060061,1.78e-11,1;DOID:8691,1.78e-11,1;DOID:630,1.97e-11,1;DOID:0050177,1.97e-11,1;DOID:0050427,1.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.36e-08!112;UBERON:0007023!1.88e-08!115;UBERON:0002390!7.65e-08!102;UBERON:0003061!7.65e-08!102;UBERON:0004177!1.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.07e-11;1!UBERON:0001153;2.07e-11;1!UBERON:0009854;2.07e-11;1!UBERON:0002372;3.81e-11;1!UBERON:0000941;3.81e-11;1!UBERON:0001785;3.81e-11;1!UBERON:0002464;3.81e-11;1!UBERON:0004904;3.81e-11;1!UBERON:0001961;3.81e-11;1!UBERON:0001021;3.81e-11;1!UBERON:0001744;3.81e-11;1!UBERON:0001042;3.81e-11;1!UBERON:0001735;3.81e-11;1!UBERON:0002331;7.76e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.18e-11,1;UBERON:0001153,2.18e-11,1;UBERON:0001045,2.18e-11,1;UBERON:0002372,2.96e-11,1;UBERON:0001961,2.96e-11,1;UBERON:0001744,2.96e-11,1;UBERON:0001735,2.96e-11,1;UBERON:0002193,3.11e-11,108;UBERON:0000941,3.63e-11,1;UBERON:0001785,3.63e-11,1;UBERON:0002464,3.63e-11,1;UBERON:0004904,3.63e-11,1;UBERON:0001021,3.63e-11,1;UBERON:0003902,3.63e-11,1;UBERON:0005425,3.63e-11,1;UBERON:0002390,1.87e-10,98;UBERON:0003061,1.87e-10,98;UBERON:0002331,7.76e-10,10;UBERON:0000358,7.76e-10,10;UBERON:0000307,7.76e-10,10;UBERON:0000091,7.76e-10,10;UBERON:0000087,7.76e-10,10;UBERON:0007010,7.76e-10,10;UBERON:0007806,7.76e-10,10;UBERON:0008780,7.76e-10,10;UBERON:0005728,7.76e-10,10;UBERON:0002405,3.10e-07,93 | |||
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| ||
|short_description=p@chr13:44272206..44272244,- | |short_description=p@chr13:44272206..44272244,- | ||
}} | }} |
Latest revision as of 16:08, 24 July 2015
Short description: | p@chr13:44272206..44272244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:44272206..44272244, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.40e-33 | 5 |
conventional dendritic cell | 2.40e-18 | 8 |
dendritic cell | 4.66e-15 | 10 |
hematopoietic cell | 2.44e-10 | 177 |
leukocyte | 1.28e-08 | 136 |
classical monocyte | 5.42e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-08 | 42 |
myeloid cell | 1.11e-07 | 108 |
common myeloid progenitor | 1.11e-07 | 108 |
macrophage dendritic cell progenitor | 4.75e-07 | 61 |
hematopoietic oligopotent progenitor cell | 5.32e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.32e-07 | 161 |
defensive cell | 6.12e-07 | 48 |
phagocyte | 6.12e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.18e-11 | 1 |
caecum | 2.18e-11 | 1 |
midgut | 2.18e-11 | 1 |
tonsil | 2.96e-11 | 1 |
mucosa-associated lymphoid tissue | 2.96e-11 | 1 |
lymphoid tissue | 2.96e-11 | 1 |
tonsillar ring | 2.96e-11 | 1 |
hemolymphoid system | 3.11e-11 | 108 |
cranial nerve II | 3.63e-11 | 1 |
cranial nerve | 3.63e-11 | 1 |
nerve trunk | 3.63e-11 | 1 |
nerve connecting eye with brain | 3.63e-11 | 1 |
nerve | 3.63e-11 | 1 |
retinal neural layer | 3.63e-11 | 1 |
presumptive neural retina | 3.63e-11 | 1 |
hematopoietic system | 1.87e-10 | 98 |
blood island | 1.87e-10 | 98 |
umbilical cord | 7.76e-10 | 10 |
blastocyst | 7.76e-10 | 10 |
blastula | 7.76e-10 | 10 |
bilaminar disc | 7.76e-10 | 10 |
inner cell mass | 7.76e-10 | 10 |
cleaving embryo | 7.76e-10 | 10 |
connecting stalk | 7.76e-10 | 10 |
inner cell mass derived epiblast | 7.76e-10 | 10 |
extraembryonic mesoderm | 7.76e-10 | 10 |
immune system | 3.10e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.78e-11 | 1 |
cutaneous T cell lymphoma | 1.78e-11 | 1 |
mycosis fungoides | 1.78e-11 | 1 |
genetic disease | 1.97e-11 | 1 |
monogenic disease | 1.97e-11 | 1 |
xeroderma pigmentosum | 1.97e-11 | 1 |