FFCP PHASE1:Hg19::chr17:75450451..75450491,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:75450451..75450491,+ | |||
|description=CAGE_peak_at_chr17:75450451..75450491,+ | |description=CAGE_peak_at_chr17:75450451..75450491,+ | ||
|id=chr17:75450451..75450491,+ | |id=chr17:75450451..75450491,+ | ||
|ontology_enrichment_celltype=CL:0000223!5.65e-27!59;CL:0002076!7.30e-24!43;CL:0002251!1.07e-14!21;CL:0002368!1.85e-13!13;CL:0000622!8.17e-13!5;CL:0000066!7.46e-12!254;CL:0002159!5.02e-11!13;CL:0000244!5.21e-11!4;CL:0000731!5.21e-11!4;CL:0000154!1.35e-10!6;CL:0002327!3.48e-10!4;CL:0000068!1.72e-08!3;CL:0000069!1.72e-08!3;CL:0000307!1.72e-08!3;CL:0000377!1.72e-08!3;CL:0002623!2.74e-08!3;CL:0002621!8.05e-08!3;CL:0000150!6.72e-07!9;CL:0002202!7.44e-07!9;CL:0002632!7.44e-07!9 | |ontology_enrichment_celltype=CL:0000223!5.65e-27!59;CL:0002076!7.30e-24!43;CL:0002251!1.07e-14!21;CL:0002368!1.85e-13!13;CL:0000622!8.17e-13!5;CL:0000066!7.46e-12!254;CL:0002159!5.02e-11!13;CL:0000244!5.21e-11!4;CL:0000731!5.21e-11!4;CL:0000154!1.35e-10!6;CL:0002327!3.48e-10!4;CL:0000068!1.72e-08!3;CL:0000069!1.72e-08!3;CL:0000307!1.72e-08!3;CL:0000377!1.72e-08!3;CL:0002623!2.74e-08!3;CL:0002621!8.05e-08!3;CL:0000150!6.72e-07!9;CL:0002202!7.44e-07!9;CL:0002632!7.44e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.42e-25;4!CL:0000731;1.42e-25;4!CL:0000622;4.49e-20;5!CL:0000307;4.67e-19;3!CL:0000154;9.11e-17;6!CL:0000317;2.10e-13;2!CL:1000448;2.10e-13;2!CL:0002308;2.10e-13;2!CL:0000575;2.10e-13;2!CL:0002140;2.10e-13;2!CL:0000150;3.08e-11;9!CL:0002202;4.25e-11;9!CL:0002632;4.25e-11;9!CL:0002251;5.08e-11;20!CL:0002159;7.23e-11;14!CL:0002076;1.42e-09;42!CL:0002623;3.12e-09;3!CL:0002252;6.16e-08;1!CL:0002368;1.01e-07;13!CL:0002336;2.24e-07;1!CL:0002261;2.24e-07;1!CL:0002170;2.24e-07;1!CL:0002327;5.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.62e-25,4;CL:0000731,1.62e-25,4;CL:0000622,7.04e-20,5;CL:0000068,4.00e-19,3;CL:0000069,4.00e-19,3;CL:0000307,4.00e-19,3;CL:0000377,4.00e-19,3;CL:0000223,1.56e-18,58;CL:0000154,1.32e-16,6;CL:0000066,2.69e-14,253;CL:0000575,1.44e-13,2;CL:0000317,2.71e-13,2;CL:1000448,2.71e-13,2;CL:0002308,2.71e-13,2;CL:0002140,2.71e-13,2;CL:0002076,3.40e-13,42;CL:0000150,3.93e-11,9;CL:0002202,4.38e-11,9;CL:0002632,4.38e-11,9;CL:0002251,5.09e-11,20;CL:0002159,7.16e-11,14;CL:0000076,3.94e-10,63;CL:0002623,3.84e-09,3;CL:0002252,6.37e-08,1;CL:0002368,1.03e-07,13;CL:0002336,1.58e-07,1;CL:0002261,1.58e-07,1;CL:0002170,1.58e-07,1;CL:0002327,6.08e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;4.67e-19;3!CL:0000223;2.57e-12;58 | |||
|ontology_enrichment_disease=DOID:1749!3.14e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.58e-11;14!DOID:3151;5.05e-08;1!DOID:3149;5.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.50e-11,14;DOID:3151,4.89e-08,1;DOID:3149,4.89e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.69e-17!169;UBERON:0000925!1.69e-17!169;UBERON:0006595!1.69e-17!169;UBERON:0000166!1.46e-16!21;UBERON:0002365!1.59e-16!31;UBERON:0002330!1.59e-16!31;UBERON:0002530!3.29e-15!59;UBERON:0000161!3.91e-15!35;UBERON:0001004!9.06e-14!72;UBERON:0000165!1.06e-13!28;UBERON:0000930!1.06e-13!28;UBERON:0001007!5.67e-11!155;UBERON:0001555!5.67e-11!155;UBERON:0007026!5.67e-11!155;UBERON:0001911!3.48e-10!4;UBERON:0005333!3.48e-10!4;UBERON:0008425!3.48e-10!4;UBERON:0005311!3.48e-10!4;UBERON:0003102!4.07e-10!95;UBERON:0001444!4.65e-09!48;UBERON:0000365!8.82e-09!5;UBERON:0003729!1.18e-08!5;UBERON:0000077!2.55e-08!130;UBERON:0003408!6.11e-08!10;UBERON:0001949!8.05e-08!3;UBERON:0001041!9.12e-08!98;UBERON:0004921!1.36e-07!129;UBERON:0004185!1.36e-07!129;UBERON:0005911!1.92e-07!82;UBERON:0005910!2.72e-07!6;UBERON:0001044!8.14e-07!6;UBERON:0003293!8.14e-07!6;UBERON:0003294!8.14e-07!6;UBERON:0010047!8.14e-07!6;UBERON:0000167!8.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.65e-20;5!UBERON:0002365;1.08e-18;31!UBERON:0002330;1.08e-18;31!UBERON:0005910;3.97e-17;6!UBERON:0002419;2.10e-13;2!UBERON:0007771;2.10e-13;2!UBERON:0003297;2.10e-13;2!UBERON:0001821;2.10e-13;2!UBERON:0003487;2.10e-13;2!UBERON:0001820;2.10e-13;2!UBERON:0000486;1.24e-08;12!UBERON:0003126;1.81e-08;7!UBERON:0001005;1.81e-08;7!UBERON:0000997;1.04e-07;1!UBERON:0005056;1.04e-07;1!UBERON:0004176;1.04e-07;1!UBERON:0003343;1.19e-07;4!UBERON:0004785;1.19e-07;4!UBERON:0000964;3.95e-07;4!UBERON:0010409;3.95e-07;4!UBERON:0001911;5.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.83e-20,5;UBERON:0002365,2.64e-18,31;UBERON:0002330,2.64e-18,31;UBERON:0005910,4.32e-17,6;UBERON:0002419,2.71e-13,2;UBERON:0007771,2.71e-13,2;UBERON:0003297,2.71e-13,2;UBERON:0001821,2.71e-13,2;UBERON:0003487,2.71e-13,2;UBERON:0001820,2.71e-13,2;UBERON:0005089,2.71e-13,2;UBERON:0005088,2.71e-13,2;UBERON:0004119,5.49e-09,160;UBERON:0000925,5.49e-09,160;UBERON:0006595,5.49e-09,160;UBERON:0002530,8.28e-09,59;UBERON:0003126,1.69e-08,7;UBERON:0001005,1.69e-08,7;UBERON:0003343,1.19e-07,4;UBERON:0004785,1.19e-07,4;UBERON:0000997,1.22e-07,1;UBERON:0005056,1.22e-07,1;UBERON:0000964,3.28e-07,4;UBERON:0010409,3.28e-07,4;UBERON:0004348,3.28e-07,4;UBERON:0005427,3.28e-07,4;UBERON:0001911,6.08e-07,4;UBERON:0005333,6.08e-07,4;UBERON:0008425,6.08e-07,4;UBERON:0005311,6.08e-07,4 | |||
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| ||
|short_description=p@chr17:75450451..75450491,+ | |short_description=p@chr17:75450451..75450491,+ | ||
}} | }} |
Latest revision as of 21:45, 25 July 2015
Short description: | p@chr17:75450451..75450491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75450451..75450491, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 1.83e-20 | 5 |
exocrine gland | 2.64e-18 | 31 |
exocrine system | 2.64e-18 | 31 |
transitional epithelium | 4.32e-17 | 6 |
skin gland | 2.71e-13 | 2 |
epidermis gland | 2.71e-13 | 2 |
gland of integumental system | 2.71e-13 | 2 |
sebaceous gland | 2.71e-13 | 2 |
skin sebaceous gland | 2.71e-13 | 2 |
sweat gland | 2.71e-13 | 2 |
sweat gland placode | 2.71e-13 | 2 |
sebaceous gland placode | 2.71e-13 | 2 |
endoderm-derived structure | 5.49e-09 | 160 |
endoderm | 5.49e-09 | 160 |
presumptive endoderm | 5.49e-09 | 160 |
gland | 8.28e-09 | 59 |
trachea | 1.69e-08 | 7 |
respiratory airway | 1.69e-08 | 7 |
mucosa of oral region | 1.19e-07 | 4 |
respiratory system mucosa | 1.19e-07 | 4 |
mammalian vulva | 1.22e-07 | 1 |
external female genitalia | 1.22e-07 | 1 |
cornea | 3.28e-07 | 4 |
eye surface | 3.28e-07 | 4 |
optic eminence | 3.28e-07 | 4 |
corneal primordium | 3.28e-07 | 4 |
mammary gland | 6.08e-07 | 4 |
mammary bud | 6.08e-07 | 4 |
mammary ridge | 6.08e-07 | 4 |
mammary placode | 6.08e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.50e-11 | 14 |
skin squamous cell carcinoma | 4.89e-08 | 1 |
keratoacanthoma | 4.89e-08 | 1 |