FFCP PHASE1:Hg19::chr19:48994431..48994444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48994431..48994444,- | |||
|description=CAGE_peak_at_chr19:48994431..48994444,- | |description=CAGE_peak_at_chr19:48994431..48994444,- | ||
|id=chr19:48994431..48994444,- | |id=chr19:48994431..48994444,- | ||
|ontology_enrichment_celltype=CL:0002322!1.02e-09!5;CL:1000507!4.19e-09!12;CL:1000494!4.19e-09!12 | |ontology_enrichment_celltype=CL:0002322!1.02e-09!5;CL:1000507!4.19e-09!12;CL:1000494!4.19e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.73e-20;10!CL:1000494;4.73e-20;10!CL:0002322;1.10e-14;5!CL:1000449;2.49e-13;15!CL:0000239;5.27e-12;3!CL:1000615;5.27e-12;3!CL:0002306;5.27e-12;3!CL:1000497;9.59e-12;17!CL:0002518;9.59e-12;17!CL:0002681;4.58e-11;12!CL:0002584;4.58e-11;12!CL:0000148;1.33e-07;10!CL:0000075;2.92e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.04e-20,10;CL:1000494,4.04e-20,10;CL:0002322,1.15e-14,5;CL:1000449,2.24e-13,15;CL:0000239,5.13e-12,3;CL:1000615,5.13e-12,3;CL:0002306,5.13e-12,3;CL:1000497,8.76e-12,17;CL:0002518,8.76e-12,17;CL:0002681,4.35e-11,12;CL:0002584,4.35e-11,12;CL:0000148,1.46e-07,10;CL:0000541,1.46e-07,10;CL:0000075,3.06e-07,27;CL:0000066,4.57e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.53e-09;1 | |||
|ontology_enrichment_disease=DOID:5093!1.49e-08!4;DOID:1612!1.49e-08!4 | |ontology_enrichment_disease=DOID:5093!1.49e-08!4;DOID:1612!1.49e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.66e-32;4!DOID:1612;1.66e-32;4!DOID:6193;8.31e-10;1!DOID:12603;3.53e-09;1!DOID:299;4.34e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.02e-32,4;DOID:1612,1.02e-32,4;DOID:6193,8.68e-10,1;DOID:12603,5.28e-09,1;DOID:299,3.94e-08,25;DOID:7,5.83e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000489!8.75e-10!32;UBERON:0009773!4.19e-09!12;UBERON:0001231!4.19e-09!12;UBERON:0004810!4.19e-09!12;UBERON:0002113!2.53e-08!27;UBERON:0003918!2.53e-08!27;UBERON:0005095!2.53e-08!27;UBERON:0007687!2.53e-08!27;UBERON:0005177!6.00e-08!107;UBERON:0003887!7.41e-08!21;UBERON:0005172!3.06e-07!55;UBERON:0005173!3.06e-07!55;UBERON:0009569!5.36e-07!113;UBERON:0000464!5.61e-07!104;UBERON:0006554!9.39e-07!44 | |ontology_enrichment_uberon=UBERON:0000489!8.75e-10!32;UBERON:0009773!4.19e-09!12;UBERON:0001231!4.19e-09!12;UBERON:0004810!4.19e-09!12;UBERON:0002113!2.53e-08!27;UBERON:0003918!2.53e-08!27;UBERON:0005095!2.53e-08!27;UBERON:0007687!2.53e-08!27;UBERON:0005177!6.00e-08!107;UBERON:0003887!7.41e-08!21;UBERON:0005172!3.06e-07!55;UBERON:0005173!3.06e-07!55;UBERON:0009569!5.36e-07!113;UBERON:0000464!5.61e-07!104;UBERON:0006554!9.39e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.73e-20;10!UBERON:0009773;4.73e-20;10!UBERON:0001231;4.73e-20;10!UBERON:0004810;4.73e-20;10!UBERON:0006555;2.49e-13;15!UBERON:0004819;2.49e-13;15!UBERON:0001285;2.49e-13;15!UBERON:0007684;2.49e-13;15!UBERON:0000310;3.68e-13;10!UBERON:0006853;5.27e-12;3!UBERON:0007685;5.27e-12;3!UBERON:0004134;5.27e-12;3!UBERON:0001443;5.56e-12;11!UBERON:0002113;1.19e-11;24!UBERON:0011143;1.19e-11;24!UBERON:0001225;4.58e-11;12!UBERON:0008987;4.58e-11;12!UBERON:0000489;1.47e-09;29!UBERON:0006554;3.18e-09;30!UBERON:0001008;3.18e-09;30!UBERON:0001851;7.01e-09;15!UBERON:0000353;7.01e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.04e-20,10;UBERON:0004211,2.24e-13,15;UBERON:0009773,2.24e-13,15;UBERON:0001231,2.24e-13,15;UBERON:0001285,2.24e-13,15;UBERON:0007684,2.24e-13,15;UBERON:0004208,2.24e-13,15;UBERON:0000310,3.04e-13,10;UBERON:0006555,1.57e-12,16;UBERON:0004819,1.57e-12,16;UBERON:0001443,4.69e-12,11;UBERON:0006853,5.13e-12,3;UBERON:0007685,5.13e-12,3;UBERON:0004134,5.13e-12,3;UBERON:0001225,4.35e-11,12;UBERON:0008987,4.35e-11,12;UBERON:0002113,9.59e-11,26;UBERON:0003918,9.59e-11,26;UBERON:0011143,9.59e-11,26;UBERON:0005095,9.59e-11,26;UBERON:0007687,9.59e-11,26;UBERON:0009569,7.67e-10,112;UBERON:0000489,6.23e-09,31;UBERON:0001851,6.73e-09,15;UBERON:0000353,6.73e-09,15 | |||
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| ||
|short_description=p@chr19:48994431..48994444,- | |short_description=p@chr19:48994431..48994444,- | ||
}} | }} |
Latest revision as of 15:44, 27 July 2015
Short description: | p@chr19:48994431..48994444, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48994431..48994444, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.04e-20 | 10 |
nephron tubule epithelial cell | 4.04e-20 | 10 |
embryonic stem cell | 1.15e-14 | 5 |
epithelial cell of nephron | 2.24e-13 | 15 |
brush border epithelial cell | 5.13e-12 | 3 |
kidney cortex tubule cell | 5.13e-12 | 3 |
epithelial cell of proximal tubule | 5.13e-12 | 3 |
kidney cell | 8.76e-12 | 17 |
kidney epithelial cell | 8.76e-12 | 17 |
kidney cortical cell | 4.35e-11 | 12 |
renal cortical epithelial cell | 4.35e-11 | 12 |
melanocyte | 1.46e-07 | 10 |
melanoblast | 1.46e-07 | 10 |
columnar/cuboidal epithelial cell | 3.06e-07 | 27 |
epithelial cell | 4.57e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 4.04e-20 | 10 |
nephron epithelium | 2.24e-13 | 15 |
renal tubule | 2.24e-13 | 15 |
nephron tubule | 2.24e-13 | 15 |
nephron | 2.24e-13 | 15 |
uriniferous tubule | 2.24e-13 | 15 |
nephrogenic mesenchyme | 2.24e-13 | 15 |
breast | 3.04e-13 | 10 |
excretory tube | 1.57e-12 | 16 |
kidney epithelium | 1.57e-12 | 16 |
chest | 4.69e-12 | 11 |
renal cortex tubule | 5.13e-12 | 3 |
region of nephron tubule | 5.13e-12 | 3 |
proximal tubule | 5.13e-12 | 3 |
cortex of kidney | 4.35e-11 | 12 |
renal parenchyma | 4.35e-11 | 12 |
kidney | 9.59e-11 | 26 |
kidney mesenchyme | 9.59e-11 | 26 |
upper urinary tract | 9.59e-11 | 26 |
kidney rudiment | 9.59e-11 | 26 |
kidney field | 9.59e-11 | 26 |
subdivision of trunk | 7.67e-10 | 112 |
cavitated compound organ | 6.23e-09 | 31 |
cortex | 6.73e-09 | 15 |
parenchyma | 6.73e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.02e-32 | 4 |
breast cancer | 1.02e-32 | 4 |
epithelioid sarcoma | 8.68e-10 | 1 |
acute leukemia | 5.28e-09 | 1 |
adenocarcinoma | 3.94e-08 | 25 |
disease of anatomical entity | 5.83e-07 | 39 |