FFCP PHASE1:Hg19::chr19:55598636..55598675,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:55598636..55598675,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_at_chr19:55598636..55598675,+ | |description=CAGE_peak_at_chr19:55598636..55598675,+ | ||
|id=chr19:55598636..55598675,+ | |id=chr19:55598636..55598675,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.07e-20!35;CL:0002078!1.86e-20!44;CL:0000055!7.23e-19!180;CL:0002139!9.03e-19!24;CL:0000222!2.20e-17!119;CL:0000071!9.47e-15!18;CL:0002546!9.47e-15!18;CL:0002321!2.46e-14!248;CL:0000220!5.98e-14!246;CL:1000497!1.01e-11!18;CL:0002518!1.01e-11!18;CL:1000449!7.37e-11!16;CL:0002681!3.70e-09!13;CL:0002584!3.70e-09!13;CL:0000183!3.96e-09!59;CL:0000213!7.11e-09!57;CL:0000215!7.11e-09!57;CL:0000393!2.43e-08!60;CL:0000211!2.43e-08!60;CL:1000507!5.85e-08!12;CL:1000494!5.85e-08!12;CL:1000413!6.11e-08!9;CL:0000680!2.06e-07!57;CL:0000056!2.06e-07!57;CL:0000355!2.06e-07!57;CL:0000133!3.21e-07!59;CL:0000187!5.13e-07!54 | |ontology_enrichment_celltype=CL:0000115!1.07e-20!35;CL:0002078!1.86e-20!44;CL:0000055!7.23e-19!180;CL:0002139!9.03e-19!24;CL:0000222!2.20e-17!119;CL:0000071!9.47e-15!18;CL:0002546!9.47e-15!18;CL:0002321!2.46e-14!248;CL:0000220!5.98e-14!246;CL:1000497!1.01e-11!18;CL:0002518!1.01e-11!18;CL:1000449!7.37e-11!16;CL:0002681!3.70e-09!13;CL:0002584!3.70e-09!13;CL:0000183!3.96e-09!59;CL:0000213!7.11e-09!57;CL:0000215!7.11e-09!57;CL:0000393!2.43e-08!60;CL:0000211!2.43e-08!60;CL:1000507!5.85e-08!12;CL:1000494!5.85e-08!12;CL:1000413!6.11e-08!9;CL:0000680!2.06e-07!57;CL:0000056!2.06e-07!57;CL:0000355!2.06e-07!57;CL:0000133!3.21e-07!59;CL:0000187!5.13e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.05e-31;36!CL:0002139;2.60e-31;24!CL:0000071;2.30e-24;18!CL:0002078;1.28e-22;45!CL:1000497;1.05e-16;17!CL:0002518;1.05e-16;17!CL:1000449;1.98e-15;15!CL:0000213;7.96e-13;58!CL:0000215;7.96e-13;58!CL:0002681;1.25e-12;12!CL:0002584;1.25e-12;12!CL:1000413;1.37e-12;9!CL:1000746;1.86e-10;7!CL:1000612;1.86e-10;7!CL:0002543;1.99e-09;6!CL:1000507;3.10e-09;10!CL:1000494;3.10e-09;10!CL:0002544;5.09e-09;6!CL:0002138;1.73e-08;6!CL:0002188;4.80e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.18e-38,36;CL:0002078,2.87e-35,45;CL:0002139,2.83e-31,24;CL:0000071,2.59e-24,18;CL:0002546,2.59e-24,18;CL:0000222,9.88e-21,121;CL:0000213,9.35e-20,58;CL:0000215,9.35e-20,58;CL:1000497,3.99e-17,17;CL:0002518,3.99e-17,17;CL:1000449,1.27e-15,15;CL:0002321,2.27e-15,250;CL:0002681,1.07e-12,12;CL:0002584,1.07e-12,12;CL:1000413,1.46e-12,9;CL:1000746,1.91e-10,7;CL:1000612,1.91e-10,7;CL:1000507,2.01e-09,10;CL:1000494,2.01e-09,10;CL:0002543,2.04e-09,6;CL:0002544,5.31e-09,6;CL:0005020,1.68e-08,6;CL:0002138,1.68e-08,6;CL:0005022,1.68e-08,6;CL:0002188,4.95e-08,5;CL:0002319,6.46e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002546;2.30e-24;18!CL:0005022;1.73e-08;6!CL:0000222;1.69e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.72e-18!79;UBERON:0007798!3.72e-18!79;UBERON:0000119!4.71e-18!312;UBERON:0000483!4.16e-17!309;UBERON:0000468!6.89e-17!659;UBERON:0000477!3.24e-16!286;UBERON:0004111!4.24e-16!241;UBERON:0000475!2.62e-15!365;UBERON:0001986!9.47e-15!18;UBERON:0004638!9.47e-15!18;UBERON:0004852!9.47e-15!18;UBERON:0003914!1.18e-14!118;UBERON:0000055!1.55e-14!69;UBERON:0000467!8.18e-14!625;UBERON:0000480!1.27e-13!626;UBERON:0004535!7.25e-13!110;UBERON:0000481!2.11e-12!347;UBERON:0005256!2.95e-12!143;UBERON:0001009!3.12e-12!113;UBERON:0000025!6.69e-12!194;UBERON:0004872!1.46e-11!84;UBERON:0000487!1.53e-11!22;UBERON:0000080!5.44e-11!18;UBERON:0002120!5.44e-11!18;UBERON:0004875!5.44e-11!18;UBERON:0005721!5.44e-11!18;UBERON:0005754!5.44e-11!18;UBERON:0007297!5.44e-11!18;UBERON:0000490!6.27e-11!138;UBERON:0001981!6.43e-11!60;UBERON:0007500!6.43e-11!60;UBERON:0004537!6.43e-11!60;UBERON:0006965!6.43e-11!60;UBERON:0004211!7.37e-11!16;UBERON:0001285!7.37e-11!16;UBERON:0007684!7.37e-11!16;UBERON:0003220!7.37e-11!16;UBERON:0004208!7.37e-11!16;UBERON:0006914!7.42e-11!25;UBERON:0006555!8.18e-11!17;UBERON:0005103!8.18e-11!17;UBERON:0000083!8.18e-11!17;UBERON:0009201!8.18e-11!17;UBERON:0004819!8.18e-11!17;UBERON:0006553!8.18e-11!17;UBERON:0003074!8.18e-11!17;UBERON:0003060!8.18e-11!17;UBERON:0000914!1.77e-10!83;UBERON:0002329!1.77e-10!83;UBERON:0003077!1.77e-10!83;UBERON:0003059!1.77e-10!83;UBERON:0007282!1.77e-10!83;UBERON:0009618!1.77e-10!83;UBERON:0007285!1.77e-10!83;UBERON:0000922!2.99e-10!612;UBERON:0004876!3.44e-10!20;UBERON:0003887!6.90e-10!21;UBERON:0004290!8.87e-10!70;UBERON:0001225!3.70e-09!13;UBERON:0008987!3.70e-09!13;UBERON:0002050!6.75e-09!605;UBERON:0005423!6.75e-09!605;UBERON:0000923!1.34e-08!604;UBERON:0005291!1.34e-08!604;UBERON:0006598!1.34e-08!604;UBERON:0002532!1.34e-08!604;UBERON:0002385!1.54e-08!63;UBERON:0001015!1.54e-08!63;UBERON:0000383!1.54e-08!63;UBERON:0001134!1.79e-08!61;UBERON:0002036!1.79e-08!61;UBERON:0003082!1.79e-08!61;UBERON:0000353!2.05e-08!17;UBERON:0002100!3.07e-08!216;UBERON:0000486!3.19e-08!82;UBERON:0002113!3.60e-08!27;UBERON:0003918!3.60e-08!27;UBERON:0005095!3.60e-08!27;UBERON:0007687!3.60e-08!27;UBERON:0009773!5.85e-08!12;UBERON:0001231!5.85e-08!12;UBERON:0004810!5.85e-08!12;UBERON:0003915!6.11e-08!9;UBERON:0004700!6.11e-08!9;UBERON:0001917!6.11e-08!9;UBERON:0003103!7.15e-08!69;UBERON:0000489!2.55e-07!32;UBERON:0001638!3.40e-07!9;UBERON:0003920!3.40e-07!9;UBERON:0004582!3.40e-07!9;UBERON:0000064!3.48e-07!219;UBERON:0004121!6.91e-07!169;UBERON:0001851!6.99e-07!16;UBERON:0003104!7.39e-07!238;UBERON:0009142!7.39e-07!238;UBERON:0001473!9.57e-07!8;UBERON:0004536!9.57e-07!8;UBERON:0006558!9.57e-07!8 | |ontology_enrichment_uberon=UBERON:0002049!3.72e-18!79;UBERON:0007798!3.72e-18!79;UBERON:0000119!4.71e-18!312;UBERON:0000483!4.16e-17!309;UBERON:0000468!6.89e-17!659;UBERON:0000477!3.24e-16!286;UBERON:0004111!4.24e-16!241;UBERON:0000475!2.62e-15!365;UBERON:0001986!9.47e-15!18;UBERON:0004638!9.47e-15!18;UBERON:0004852!9.47e-15!18;UBERON:0003914!1.18e-14!118;UBERON:0000055!1.55e-14!69;UBERON:0000467!8.18e-14!625;UBERON:0000480!1.27e-13!626;UBERON:0004535!7.25e-13!110;UBERON:0000481!2.11e-12!347;UBERON:0005256!2.95e-12!143;UBERON:0001009!3.12e-12!113;UBERON:0000025!6.69e-12!194;UBERON:0004872!1.46e-11!84;UBERON:0000487!1.53e-11!22;UBERON:0000080!5.44e-11!18;UBERON:0002120!5.44e-11!18;UBERON:0004875!5.44e-11!18;UBERON:0005721!5.44e-11!18;UBERON:0005754!5.44e-11!18;UBERON:0007297!5.44e-11!18;UBERON:0000490!6.27e-11!138;UBERON:0001981!6.43e-11!60;UBERON:0007500!6.43e-11!60;UBERON:0004537!6.43e-11!60;UBERON:0006965!6.43e-11!60;UBERON:0004211!7.37e-11!16;UBERON:0001285!7.37e-11!16;UBERON:0007684!7.37e-11!16;UBERON:0003220!7.37e-11!16;UBERON:0004208!7.37e-11!16;UBERON:0006914!7.42e-11!25;UBERON:0006555!8.18e-11!17;UBERON:0005103!8.18e-11!17;UBERON:0000083!8.18e-11!17;UBERON:0009201!8.18e-11!17;UBERON:0004819!8.18e-11!17;UBERON:0006553!8.18e-11!17;UBERON:0003074!8.18e-11!17;UBERON:0003060!8.18e-11!17;UBERON:0000914!1.77e-10!83;UBERON:0002329!1.77e-10!83;UBERON:0003077!1.77e-10!83;UBERON:0003059!1.77e-10!83;UBERON:0007282!1.77e-10!83;UBERON:0009618!1.77e-10!83;UBERON:0007285!1.77e-10!83;UBERON:0000922!2.99e-10!612;UBERON:0004876!3.44e-10!20;UBERON:0003887!6.90e-10!21;UBERON:0004290!8.87e-10!70;UBERON:0001225!3.70e-09!13;UBERON:0008987!3.70e-09!13;UBERON:0002050!6.75e-09!605;UBERON:0005423!6.75e-09!605;UBERON:0000923!1.34e-08!604;UBERON:0005291!1.34e-08!604;UBERON:0006598!1.34e-08!604;UBERON:0002532!1.34e-08!604;UBERON:0002385!1.54e-08!63;UBERON:0001015!1.54e-08!63;UBERON:0000383!1.54e-08!63;UBERON:0001134!1.79e-08!61;UBERON:0002036!1.79e-08!61;UBERON:0003082!1.79e-08!61;UBERON:0000353!2.05e-08!17;UBERON:0002100!3.07e-08!216;UBERON:0000486!3.19e-08!82;UBERON:0002113!3.60e-08!27;UBERON:0003918!3.60e-08!27;UBERON:0005095!3.60e-08!27;UBERON:0007687!3.60e-08!27;UBERON:0009773!5.85e-08!12;UBERON:0001231!5.85e-08!12;UBERON:0004810!5.85e-08!12;UBERON:0003915!6.11e-08!9;UBERON:0004700!6.11e-08!9;UBERON:0001917!6.11e-08!9;UBERON:0003103!7.15e-08!69;UBERON:0000489!2.55e-07!32;UBERON:0001638!3.40e-07!9;UBERON:0003920!3.40e-07!9;UBERON:0004582!3.40e-07!9;UBERON:0000064!3.48e-07!219;UBERON:0004121!6.91e-07!169;UBERON:0001851!6.99e-07!16;UBERON:0003104!7.39e-07!238;UBERON:0009142!7.39e-07!238;UBERON:0001473!9.57e-07!8;UBERON:0004536!9.57e-07!8;UBERON:0006558!9.57e-07!8 | ||
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|phase1_expression=0.726713517082227,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,1.47440361900905,18.8406315352555,0.655324116390517,0,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0.487932798790507,1.84681587115182,3.67201244239655,0.940364164434263,7.15589967827642,10.1287074553934,9.91786852798942,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.12786256184353,0.361439152384566,1.50401373190767,0.579386075843295,0,0,1.70162670895322,2.4390233720882,0.966182642624386,0.523916301990851,0,0,0,0,0.398873881556595,0,0,0,14.5096557377695,4.30117297553062,13.1913390610886,18.0898541415683,11.3264847776675,5.22724279686128,10.6587432933773,5.42675194255591,2.84613010149368,10.3763389957048,38.268785125369,23.5684352772739,14.399661395342,9.92690316933846,14.5825550618717,8.8406731001239,18.6359379279721,16.441276150565,29.1301611185178,17.0867818722263,26.3810511259786,0,0,0,0,0.379891534993739,0,0,0.709336764396714,0,1.06748995729705,0.24666754841716,0.311211035399766,1.0776853765575,4.08654757783647,0.454072282934794,0,0.468642863667593,0.312160076830321,1.1409436430889,0.747243402759005,0.939475989150119,0.647491777472526,1.12360645361799,0.61246251376468,2.21101771161182,1.13658359293342,1.18800285728205,1.23633464639278,4.55080680969013,2.87447256726495,1.85169725349473,0.375355559615893,1.6623846929051,1.75591048352335,0.30648779579902,0.600952235626387,1.24775401476023,0.538168907066586,0.213557388818567,0.423863802319124,0.300091096084402,1.33968288009971,0.515281080091258,1.11670113798954,0.675105328965065,1.07180705677318,0.252433774244115,0.276149695926898,0.646584227275248,0.355009592516614,0.10075209822764,0.508681776931463,1.35282597214308,0.818238361772504,0.573609190778008,0.609868530647977,0.927708378250397,0.69716365721711,1.24393266018445,0.252320850875628,1.45990943630332,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,16.9775754563669,8.41450642820675,1.2347220339942,1.47008711385542,0,0,0,0,0,0.686271241194102,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,7.27954349695705,1.44331342025273,2.55046890945169,0.70445216541493,9.3838191044698,12.0376233269919,8.18092854608773,0,0,0,0,0,0,0.839910640994298,0.567100388969546,0,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0.288239906833923,0.25248486685276,4.69884417762051,1.14596527667483,5.86087236050235,1.71072446022705,1.23392991243988,0.600686115687835,5.71652865261156,2.80327710863402,1.30788020649984,0.95339771567235,0.387815147273333,0,0,1.32969058292435,1.04007436911366,2.05765899409714,2.83698264046557,3.72991050622539,0.142977993658148,1.08524321078289,0.823240336780769,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0.479249710983165,3.44585807502342,1.42636905040718,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,1.77866236955724,1.30139853857622,0,2.34522771468088,0.637938751653163,0,0,0,0.12269149171914,2.00068208423871,0.271265023699736,0.415941723061614,0.178428988797162,0.315404830067869,0,0,0,4.1389228517002,1.32845119707087,0.921845842708516,0.434418072340414,1.17480694477644,2.05886054286514,0,0,0,0.303127571446259,0,0.604780586659361,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0,0.276242966807689,0.34444334449382,0.546273504020151,0.786746489756545,4.06079651616671,2.23344477602803,5.49044838423799,4.38417673959782,1.58327443339314,14.7853399292166,19.5607761067993,7.1252252313706,23.1340879035434,7.58650025122788,13.0439341202262,1.52925763827023,0.831076008928724,6.26849313222099,0,0,2.05160100093111,5.9042636225947,0,0.206082023295445,0.0915694648183434,0.330037999682352,0,0,0,0.193341436584244,0.770243085573222,1.07452572308291,1.51620229732984,0.644521469209642,0.580066775656914,0.93749290157711,1.4245125703478,0,0.960950336825531,0,0.2023155617111,0,0.31481234683064,1.3940745403212,1.54016790088044,1.59691809095107,0.869932992075073,0,0.715624433709956,0.744316738719335,1.2655176988749,1.90630193923825,1.27948895655667,0.855877976067841,0.636406495851874,0,1.43897966066652,0.823611089208164,1.29593642580255,1.2130948894399,0,0.842516912477962,1.95053495635836,0.731140468893853,2.11300293513511,1.50149902548784,0.565621727814851,0,0,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,3.09865162785466,1.72093622644862,1.17898849215745,0.35667105148125,0.709522128141196,0,0.329294892959902,3.79473173765715,8.39843328587959,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,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| ||
|short_description=p@chr19:55598636..55598675,+ | |short_description=p@chr19:55598636..55598675,+ | ||
}} | }} |
Latest revision as of 17:20, 27 July 2015
Short description: | p@chr19:55598636..55598675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55598636..55598675, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.18e-38 | 36 |
meso-epithelial cell | 2.87e-35 | 45 |
endothelial cell of vascular tree | 2.83e-31 | 24 |
blood vessel endothelial cell | 2.59e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.59e-24 | 18 |
mesodermal cell | 9.88e-21 | 121 |
lining cell | 9.35e-20 | 58 |
barrier cell | 9.35e-20 | 58 |
kidney cell | 3.99e-17 | 17 |
kidney epithelial cell | 3.99e-17 | 17 |
epithelial cell of nephron | 1.27e-15 | 15 |
embryonic cell | 2.27e-15 | 250 |
kidney cortical cell | 1.07e-12 | 12 |
renal cortical epithelial cell | 1.07e-12 | 12 |
endothelial cell of artery | 1.46e-12 | 9 |
glomerular cell | 1.91e-10 | 7 |
kidney corpuscule cell | 1.91e-10 | 7 |
kidney tubule cell | 2.01e-09 | 10 |
nephron tubule epithelial cell | 2.01e-09 | 10 |
vein endothelial cell | 2.04e-09 | 6 |
aortic endothelial cell | 5.31e-09 | 6 |
lymphangioblast | 1.68e-08 | 6 |
endothelial cell of lymphatic vessel | 1.68e-08 | 6 |
vascular lymphangioblast | 1.68e-08 | 6 |
glomerular endothelial cell | 4.95e-08 | 5 |
neural cell | 6.46e-07 | 25 |