FFCP PHASE1:Hg19::chr1:156073023..156073027,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156073023..156073027,- | |||
|description=CAGE_peak_at_chr1:156073023..156073027,- | |description=CAGE_peak_at_chr1:156073023..156073027,- | ||
|id=chr1:156073023..156073027,- | |id=chr1:156073023..156073027,- | ||
|ontology_enrichment_celltype=CL:0002368!9.87e-09!13;CL:0000066!1.42e-07!254;CL:0002076!1.75e-07!43;CL:0000076!9.56e-07!62 | |ontology_enrichment_celltype=CL:0002368!9.87e-09!13;CL:0000066!1.42e-07!254;CL:0002076!1.75e-07!43;CL:0000076!9.56e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.30e-21;13!CL:0002202;1.76e-20;9!CL:0002632;1.76e-20;9!CL:0000307;2.73e-16;3!CL:0002328;4.99e-16;3!CL:0002188;1.11e-09;5!CL:1000746;3.67e-07;7!CL:1000612;3.67e-07;7!CL:0001014;9.27e-07;2!CL:0000575;9.27e-07;2!CL:0001016;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.22e-21,13;CL:0002202,1.60e-20,9;CL:0002632,1.60e-20,9;CL:0000068,2.73e-16,3;CL:0000069,2.73e-16,3;CL:0000307,2.73e-16,3;CL:0000377,2.73e-16,3;CL:0002328,4.30e-16,3;CL:0002188,1.06e-09,5;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7;CL:0000575,7.20e-07,2;CL:0001014,7.61e-07,2;CL:0001016,7.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;2.73e-16;3!UBERON:0006238;7.97e-10;10 | |||
|ontology_enrichment_disease=DOID:1749!1.64e-10!14;DOID:305!1.36e-07!106;DOID:0050687!3.79e-07!143 | |ontology_enrichment_disease=DOID:1749!1.64e-10!14;DOID:305!1.36e-07!106;DOID:0050687!3.79e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3093;4.76e-09;11!DOID:4231;9.27e-07;2!DOID:1907;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.83e-09,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.99e-16;3!UBERON:0002031;4.99e-16;3!UBERON:0007196;2.14e-12;15!UBERON:0001558;2.14e-12;15!UBERON:0002185;5.44e-10;5!UBERON:0003126;1.72e-07;7!UBERON:0001005;1.72e-07;7!UBERON:0000485;2.22e-07;7!UBERON:0000074;3.67e-07;7!UBERON:0001229;3.67e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.30e-16,3;UBERON:0002031,4.30e-16,3;UBERON:0007196,2.02e-12,15;UBERON:0001558,2.02e-12,15;UBERON:0002185,4.98e-10,5;UBERON:0003126,1.72e-07,7;UBERON:0001005,1.72e-07,7;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,2.409647350226,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,1.85392221392215,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0.98315564691574,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.924291702687866,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0.384380134730212,1.14851441245126,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.384888450902048,3.35151137767894,3.26672954583968,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16207551742449,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.379119477770928,0,0,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0,0.290268993867255,0,0.164230914106418,0,0,0,0,0,0,0,0.160317640503067,0,0.39961921916426,0.576361668616424,0,0,0,0,0.235694034616795,2.03856309110421,2.196659772559,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,2.87454938312845,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0.578742114812744,0.506827321959218,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0.213383459388282,0,1.13503190713367,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0.693153996902029,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.294450700845729,0.731507549893617,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0.705789743431384,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,1.00918676322552,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,2.409647350226,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,1.85392221392215,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0.98315564691574,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0.515281080091258,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.924291702687866,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0.384380134730212,1.14851441245126,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.384888450902048,3.35151137767894,3.26672954583968,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16207551742449,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.379119477770928,0,0,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0,0.290268993867255,0,0.164230914106418,0,0,0,0,0,0,0,0.160317640503067,0,0.39961921916426,0.576361668616424,0,0,0,0,0.235694034616795,2.03856309110421,2.196659772559,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,2.87454938312845,0.303298235083296,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0.578742114812744,0.506827321959218,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0.213383459388282,0,1.13503190713367,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0.693153996902029,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.294450700845729,0.731507549893617,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0.705789743431384,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,1.00918676322552,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr1:156073023..156073027,- | |short_description=p@chr1:156073023..156073027,- | ||
}} | }} |
Latest revision as of 22:28, 27 July 2015
Short description: | p@chr1:156073023..156073027, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156073023..156073027, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.22e-21 | 13 |
epithelial cell of tracheobronchial tree | 1.60e-20 | 9 |
epithelial cell of lower respiratory tract | 1.60e-20 | 9 |
duct epithelial cell | 2.73e-16 | 3 |
branched duct epithelial cell | 2.73e-16 | 3 |
tracheal epithelial cell | 2.73e-16 | 3 |
tracheoblast | 2.73e-16 | 3 |
bronchial epithelial cell | 4.30e-16 | 3 |
glomerular endothelial cell | 1.06e-09 | 5 |
glomerular cell | 3.56e-07 | 7 |
kidney corpuscule cell | 3.56e-07 | 7 |
corneal epithelial cell | 7.20e-07 | 2 |
CD1a-positive Langerhans cell | 7.61e-07 | 2 |
immature CD1a-positive Langerhans cell | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.30e-16 | 3 |
epithelium of bronchus | 4.30e-16 | 3 |
tracheobronchial tree | 2.02e-12 | 15 |
lower respiratory tract | 2.02e-12 | 15 |
bronchus | 4.98e-10 | 5 |
trachea | 1.72e-07 | 7 |
respiratory airway | 1.72e-07 | 7 |
primitive nephron | 3.56e-07 | 7 |
renal glomerulus | 3.56e-07 | 7 |
renal corpuscle | 3.56e-07 | 7 |
glomerular capsule | 3.56e-07 | 7 |
metanephric mesenchyme | 3.56e-07 | 7 |
glomerular tuft | 3.56e-07 | 7 |
S-shaped body | 3.56e-07 | 7 |
renal vesicle | 3.56e-07 | 7 |
comma-shaped body | 3.56e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.83e-09 | 11 |