FFCP PHASE1:Hg19::chr1:81001398..81001426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000418041,ENST00000443104_5end | |association_with_transcript=-13bp_to_ENST00000418041,ENST00000443104_5end | ||
|cluster_id=chr1:81001398..81001426,+ | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_1_at_ENST00000418041_5end,CAGE_peak_1_at_ENST00000443104_5end | |description=CAGE_peak_1_at_ENST00000418041_5end,CAGE_peak_1_at_ENST00000443104_5end | ||
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|ontology_enrichment_celltype=CL:1000507!3.01e-49!12;CL:1000494!3.01e-49!12;CL:1000497!1.55e-48!18;CL:0002518!1.55e-48!18;CL:1000449!1.27e-36!16;CL:0002681!3.71e-20!13;CL:0002584!3.71e-20!13;CL:0000650!4.43e-11!3;CL:1000618!4.43e-11!3;CL:1001318!4.43e-11!3;CL:0002173!4.43e-11!3;CL:1000500!4.43e-11!3;CL:0000239!5.69e-11!3;CL:1000615!5.69e-11!3;CL:0002306!5.69e-11!3;CL:0000669!5.57e-07!5 | |ontology_enrichment_celltype=CL:1000507!3.01e-49!12;CL:1000494!3.01e-49!12;CL:1000497!1.55e-48!18;CL:0002518!1.55e-48!18;CL:1000449!1.27e-36!16;CL:0002681!3.71e-20!13;CL:0002584!3.71e-20!13;CL:0000650!4.43e-11!3;CL:1000618!4.43e-11!3;CL:1001318!4.43e-11!3;CL:0002173!4.43e-11!3;CL:1000500!4.43e-11!3;CL:0000239!5.69e-11!3;CL:1000615!5.69e-11!3;CL:0002306!5.69e-11!3;CL:0000669!5.57e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.83e-79;10!CL:1000494;4.83e-79;10!CL:1000497;7.17e-69;17!CL:0002518;7.17e-69;17!CL:1000449;2.19e-52;15!CL:0002681;3.48e-29;12!CL:0002584;3.48e-29;12!CL:0000650;6.05e-21;2!CL:1000500;6.05e-21;2!CL:1000618;6.05e-21;2!CL:1001318;6.05e-21;2!CL:0002173;6.05e-21;2!CL:0000239;2.96e-14;3!CL:1000615;2.96e-14;3!CL:0002306;2.96e-14;3!CL:0000669;5.87e-11;4 | |ontology_enrichment_celltype_v019=CL:1000507;4.83e-79;10!CL:1000494;4.83e-79;10!CL:1000497;7.17e-69;17!CL:0002518;7.17e-69;17!CL:1000449;2.19e-52;15!CL:0002681;3.48e-29;12!CL:0002584;3.48e-29;12!CL:0000650;6.05e-21;2!CL:1000500;6.05e-21;2!CL:1000618;6.05e-21;2!CL:1001318;6.05e-21;2!CL:0002173;6.05e-21;2!CL:0000239;2.96e-14;3!CL:1000615;2.96e-14;3!CL:0002306;2.96e-14;3!CL:0000669;5.87e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.95e-79,10;CL:1000494,6.95e-79,10;CL:1000497,7.66e-69,17;CL:0002518,7.66e-69,17;CL:1000449,2.79e-52,15;CL:0002681,4.34e-29,12;CL:0002584,4.34e-29,12;CL:0000650,5.20e-21,2;CL:1000500,5.20e-21,2;CL:1000618,5.20e-21,2;CL:1001318,5.20e-21,2;CL:0002173,5.20e-21,2;CL:0000239,3.39e-14,3;CL:1000615,3.39e-14,3;CL:0002306,3.39e-14,3;CL:0000669,5.44e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.74e-16;10!UBERON:0007687;1.74e-16;10!UBERON:0006242;4.44e-11;1!UBERON:0003104;5.13e-08;31 | |ontology_enrichment_development_v019=UBERON:0003918;1.74e-16;10!UBERON:0007687;1.74e-16;10!UBERON:0006242;4.44e-11;1!UBERON:0003104;5.13e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!3.01e-49!12;UBERON:0001231!3.01e-49!12;UBERON:0004810!3.01e-49!12;UBERON:0002113!7.66e-45!27;UBERON:0003918!7.66e-45!27;UBERON:0005095!7.66e-45!27;UBERON:0007687!7.66e-45!27;UBERON:0000489!1.79e-37!32;UBERON:0004211!1.27e-36!16;UBERON:0001285!1.27e-36!16;UBERON:0007684!1.27e-36!16;UBERON:0003220!1.27e-36!16;UBERON:0004208!1.27e-36!16;UBERON:0006555!2.16e-34!17;UBERON:0005103!2.16e-34!17;UBERON:0000083!2.16e-34!17;UBERON:0009201!2.16e-34!17;UBERON:0004819!2.16e-34!17;UBERON:0006553!2.16e-34!17;UBERON:0003074!2.16e-34!17;UBERON:0003060!2.16e-34!17;UBERON:0000080!2.07e-32!18;UBERON:0002120!2.07e-32!18;UBERON:0004875!2.07e-32!18;UBERON:0005721!2.07e-32!18;UBERON:0005754!2.07e-32!18;UBERON:0007297!2.07e-32!18;UBERON:0004876!4.88e-29!20;UBERON:0003887!1.36e-27!21;UBERON:0000058!3.62e-27!26;UBERON:0006554!1.30e-26!44;UBERON:0001008!5.73e-26!45;UBERON:0005172!3.09e-24!55;UBERON:0005173!3.09e-24!55;UBERON:0002417!1.35e-21!61;UBERON:0000916!1.35e-21!61;UBERON:0001225!3.71e-20!13;UBERON:0008987!3.71e-20!13;UBERON:0001851!2.70e-16!16;UBERON:0003103!4.18e-16!69;UBERON:0000353!2.61e-15!17;UBERON:0003064!4.46e-15!37;UBERON:0005177!6.69e-15!107;UBERON:0003886!2.12e-12!63;UBERON:0009569!3.75e-12!113;UBERON:0003567!4.43e-11!3;UBERON:0003838!4.43e-11!3;UBERON:0005169!4.43e-11!3;UBERON:0002321!4.43e-11!3;UBERON:0005215!4.43e-11!3;UBERON:0002303!4.43e-11!3;UBERON:0002319!4.43e-11!3;UBERON:0006853!5.69e-11!3;UBERON:0007685!5.69e-11!3;UBERON:0004134!5.69e-11!3;UBERON:0002553!5.70e-11!70;UBERON:0007029!1.78e-08!1;UBERON:0000464!3.72e-08!104;UBERON:0003891!5.57e-07!5;UBERON:0003586!5.57e-07!5 | |ontology_enrichment_uberon=UBERON:0009773!3.01e-49!12;UBERON:0001231!3.01e-49!12;UBERON:0004810!3.01e-49!12;UBERON:0002113!7.66e-45!27;UBERON:0003918!7.66e-45!27;UBERON:0005095!7.66e-45!27;UBERON:0007687!7.66e-45!27;UBERON:0000489!1.79e-37!32;UBERON:0004211!1.27e-36!16;UBERON:0001285!1.27e-36!16;UBERON:0007684!1.27e-36!16;UBERON:0003220!1.27e-36!16;UBERON:0004208!1.27e-36!16;UBERON:0006555!2.16e-34!17;UBERON:0005103!2.16e-34!17;UBERON:0000083!2.16e-34!17;UBERON:0009201!2.16e-34!17;UBERON:0004819!2.16e-34!17;UBERON:0006553!2.16e-34!17;UBERON:0003074!2.16e-34!17;UBERON:0003060!2.16e-34!17;UBERON:0000080!2.07e-32!18;UBERON:0002120!2.07e-32!18;UBERON:0004875!2.07e-32!18;UBERON:0005721!2.07e-32!18;UBERON:0005754!2.07e-32!18;UBERON:0007297!2.07e-32!18;UBERON:0004876!4.88e-29!20;UBERON:0003887!1.36e-27!21;UBERON:0000058!3.62e-27!26;UBERON:0006554!1.30e-26!44;UBERON:0001008!5.73e-26!45;UBERON:0005172!3.09e-24!55;UBERON:0005173!3.09e-24!55;UBERON:0002417!1.35e-21!61;UBERON:0000916!1.35e-21!61;UBERON:0001225!3.71e-20!13;UBERON:0008987!3.71e-20!13;UBERON:0001851!2.70e-16!16;UBERON:0003103!4.18e-16!69;UBERON:0000353!2.61e-15!17;UBERON:0003064!4.46e-15!37;UBERON:0005177!6.69e-15!107;UBERON:0003886!2.12e-12!63;UBERON:0009569!3.75e-12!113;UBERON:0003567!4.43e-11!3;UBERON:0003838!4.43e-11!3;UBERON:0005169!4.43e-11!3;UBERON:0002321!4.43e-11!3;UBERON:0005215!4.43e-11!3;UBERON:0002303!4.43e-11!3;UBERON:0002319!4.43e-11!3;UBERON:0006853!5.69e-11!3;UBERON:0007685!5.69e-11!3;UBERON:0004134!5.69e-11!3;UBERON:0002553!5.70e-11!70;UBERON:0007029!1.78e-08!1;UBERON:0000464!3.72e-08!104;UBERON:0003891!5.57e-07!5;UBERON:0003586!5.57e-07!5 | ||
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|short_description=p1@ENST00000418041,p1@ENST00000443104 | |short_description=p1@ENST00000418041,p1@ENST00000443104 | ||
}} | }} |
Latest revision as of 10:35, 28 July 2015
Short description: | p1@ENST00000418041, p1@ENST00000443104 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418041_5end, CAGE_peak_1_at_ENST00000443104_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -13bp_to_ENST00000418041, ENST00000443104_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.95e-79 | 10 |
nephron tubule epithelial cell | 6.95e-79 | 10 |
kidney cell | 7.66e-69 | 17 |
kidney epithelial cell | 7.66e-69 | 17 |
epithelial cell of nephron | 2.79e-52 | 15 |
kidney cortical cell | 4.34e-29 | 12 |
renal cortical epithelial cell | 4.34e-29 | 12 |
mesangial cell | 5.20e-21 | 2 |
kidney interstitial cell | 5.20e-21 | 2 |
juxtaglomerular complex cell | 5.20e-21 | 2 |
renal interstitial pericyte | 5.20e-21 | 2 |
extraglomerular mesangial cell | 5.20e-21 | 2 |
brush border epithelial cell | 3.39e-14 | 3 |
kidney cortex tubule cell | 3.39e-14 | 3 |
epithelial cell of proximal tubule | 3.39e-14 | 3 |
pericyte cell | 5.44e-11 | 4 |