FFCP PHASE1:Hg19::chr1:94240867..94240875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_uc001dqd.1_5end | |association_with_transcript=54bp_to_uc001dqd.1_5end | ||
|cluster_id=chr1:94240867..94240875,- | |||
|coexpression_cluster_id=C4010 | |||
|description=CAGE_peak_4_at_uc001dqd.1_5end | |description=CAGE_peak_4_at_uc001dqd.1_5end | ||
|id=chr1:94240867..94240875,- | |id=chr1:94240867..94240875,- | ||
|ontology_enrichment_celltype=CL:0000066!1.01e-29!254;CL:0002159!1.06e-25!13;CL:0002076!1.03e-24!43;CL:0002368!9.84e-21!13;CL:0000223!8.10e-19!59;CL:0000244!2.76e-14!4;CL:0000731!2.76e-14!4;CL:0002202!3.36e-14!9;CL:0002632!3.36e-14!9;CL:0002166!3.99e-12!3;CL:0000068!7.89e-12!3;CL:0000069!7.89e-12!3;CL:0000307!7.89e-12!3;CL:0000377!7.89e-12!3;CL:0002328!1.39e-11!3;CL:0002621!2.27e-11!3;CL:0000362!6.82e-11!8;CL:0002077!9.86e-11!33;CL:0000076!4.20e-10!62;CL:0000240!1.32e-09!6;CL:0000311!1.32e-09!6;CL:0000079!1.32e-09!6;CL:0000237!1.32e-09!6;CL:0000036!1.32e-09!6;CL:0000357!1.32e-09!6;CL:0000114!1.32e-09!6;CL:0002251!2.82e-09!21;CL:0000220!1.24e-08!246;CL:0002327!1.47e-08!4;CL:0002321!1.69e-08!248;CL:0000317!2.63e-08!2;CL:1000448!2.63e-08!2;CL:0002308!2.63e-08!2;CL:0002140!2.63e-08!2;CL:0000575!9.23e-08!2;CL:0000622!5.82e-07!5;CL:0000063!7.87e-07!578;CL:0000312!8.88e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.01e-29!254;CL:0002159!1.06e-25!13;CL:0002076!1.03e-24!43;CL:0002368!9.84e-21!13;CL:0000223!8.10e-19!59;CL:0000244!2.76e-14!4;CL:0000731!2.76e-14!4;CL:0002202!3.36e-14!9;CL:0002632!3.36e-14!9;CL:0002166!3.99e-12!3;CL:0000068!7.89e-12!3;CL:0000069!7.89e-12!3;CL:0000307!7.89e-12!3;CL:0000377!7.89e-12!3;CL:0002328!1.39e-11!3;CL:0002621!2.27e-11!3;CL:0000362!6.82e-11!8;CL:0002077!9.86e-11!33;CL:0000076!4.20e-10!62;CL:0000240!1.32e-09!6;CL:0000311!1.32e-09!6;CL:0000079!1.32e-09!6;CL:0000237!1.32e-09!6;CL:0000036!1.32e-09!6;CL:0000357!1.32e-09!6;CL:0000114!1.32e-09!6;CL:0002251!2.82e-09!21;CL:0000220!1.24e-08!246;CL:0002327!1.47e-08!4;CL:0002321!1.69e-08!248;CL:0000317!2.63e-08!2;CL:1000448!2.63e-08!2;CL:0002308!2.63e-08!2;CL:0002140!2.63e-08!2;CL:0000575!9.23e-08!2;CL:0000622!5.82e-07!5;CL:0000063!7.87e-07!578;CL:0000312!8.88e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.02e-32;3!CL:0000307;4.10e-32;3!CL:0002159;9.75e-27;14!CL:0000317;1.56e-21;2!CL:1000448;1.56e-21;2!CL:0002308;1.56e-21;2!CL:0002140;1.56e-21;2!CL:0002202;4.21e-19;9!CL:0002632;4.21e-19;9!CL:0002368;2.62e-13;13!CL:0002336;1.19e-11;1!CL:0002261;1.19e-11;1!CL:1001319;1.19e-11;1!CL:1000600;1.19e-11;1!CL:0002170;1.19e-11;1!CL:0000362;5.20e-11;9!CL:0002077;7.30e-10;34!CL:0000622;3.44e-09;5!CL:0002076;3.54e-08;42!CL:0000240;6.37e-08;6!CL:0000311;6.37e-08;6!CL:0000079;6.37e-08;6!CL:0000237;6.37e-08;6!CL:0000154;8.41e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.26e-33,3;CL:0000068,6.28e-32,3;CL:0000069,6.28e-32,3;CL:0000307,6.28e-32,3;CL:0000377,6.28e-32,3;CL:0002159,1.02e-26,14;CL:0000317,1.73e-21,2;CL:1000448,1.73e-21,2;CL:0002308,1.73e-21,2;CL:0002140,1.73e-21,2;CL:0002202,5.08e-19,9;CL:0002632,5.08e-19,9;CL:0002368,2.98e-13,13;CL:0000066,1.46e-12,253;CL:0002336,8.64e-12,1;CL:0002261,8.64e-12,1;CL:0002170,8.64e-12,1;CL:0002076,1.30e-11,42;CL:1001319,1.81e-11,1;CL:1000600,1.81e-11,1;CL:0000362,5.77e-11,9;CL:0002077,8.44e-11,34;CL:0000223,9.79e-11,58;CL:0000622,3.59e-09,5;CL:0000240,6.16e-08,6;CL:0000311,6.16e-08,6;CL:0000079,6.16e-08,6;CL:0000237,6.16e-08,6;CL:0000036,6.16e-08,6;CL:0000357,6.16e-08,6;CL:0000114,6.16e-08,6;CL:0000154,8.71e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000377;4.10e-32;3!CL:0000357;6.37e-08;6!CL:0000114;6.37e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!1.42e-10!14 | |ontology_enrichment_disease=DOID:1749!1.42e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:4074;8.93e-07;2!DOID:4905;8.93e-07;2!DOID:3498;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,8.93e-07,2;DOID:4905,8.93e-07,2;DOID:3498,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.59e-17!5;UBERON:0005910!1.49e-14!6;UBERON:0004119!1.24e-11!169;UBERON:0000925!1.24e-11!169;UBERON:0006595!1.24e-11!169;UBERON:0007196!1.33e-11!14;UBERON:0001558!1.33e-11!14;UBERON:0004815!1.39e-11!3;UBERON:0002031!1.39e-11!3;UBERON:0001949!2.27e-11!3;UBERON:0001004!5.15e-11!72;UBERON:0005153!9.85e-11!37;UBERON:0005157!6.67e-10!51;UBERON:0000161!1.41e-09!35;UBERON:0001708!3.49e-09!4;UBERON:0001704!3.49e-09!4;UBERON:0002185!8.78e-09!4;UBERON:0001911!1.47e-08!4;UBERON:0005333!1.47e-08!4;UBERON:0008425!1.47e-08!4;UBERON:0005311!1.47e-08!4;UBERON:0003102!1.95e-08!95;UBERON:0002419!2.63e-08!2;UBERON:0007771!2.63e-08!2;UBERON:0003297!2.63e-08!2;UBERON:0001821!2.63e-08!2;UBERON:0003487!2.63e-08!2;UBERON:0001820!2.63e-08!2;UBERON:0005089!2.63e-08!2;UBERON:0005088!2.63e-08!2;UBERON:0003126!2.89e-08!7;UBERON:0001005!2.89e-08!7;UBERON:0005178!3.42e-08!34;UBERON:0002224!3.42e-08!34;UBERON:0000065!4.64e-08!53;UBERON:0005911!4.79e-08!82;UBERON:0005181!6.67e-08!35;UBERON:0003729!9.62e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.01e-24;4!UBERON:0008895;1.01e-24;4!UBERON:0002419;1.56e-21;2!UBERON:0007771;1.56e-21;2!UBERON:0003297;1.56e-21;2!UBERON:0001821;1.56e-21;2!UBERON:0003487;1.56e-21;2!UBERON:0001820;1.56e-21;2!UBERON:0011159;6.51e-20;5!UBERON:0003126;3.80e-14;7!UBERON:0001005;3.80e-14;7!UBERON:0004645;1.19e-11;1!UBERON:0001256;1.19e-11;1!UBERON:0001259;1.19e-11;1!UBERON:0007196;1.45e-11;15!UBERON:0001558;1.45e-11;15!UBERON:0011137;2.31e-09;11!UBERON:0010323;2.31e-09;11!UBERON:0000365;3.44e-09;5!UBERON:0000486;2.17e-08;12!UBERON:0005910;8.41e-08;6!UBERON:0001003;8.29e-07;15!UBERON:0007376;8.29e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,8.64e-25,4;UBERON:0008895,8.64e-25,4;UBERON:0002419,1.73e-21,2;UBERON:0007771,1.73e-21,2;UBERON:0003297,1.73e-21,2;UBERON:0001821,1.73e-21,2;UBERON:0003487,1.73e-21,2;UBERON:0001820,1.73e-21,2;UBERON:0005089,1.73e-21,2;UBERON:0005088,1.73e-21,2;UBERON:0011159,5.74e-20,5;UBERON:0010188,9.55e-17,6;UBERON:0002539,9.55e-17,6;UBERON:0008816,9.55e-17,6;UBERON:0003126,4.55e-14,7;UBERON:0001005,4.55e-14,7;UBERON:0007196,1.62e-11,15;UBERON:0001558,1.62e-11,15;UBERON:0004645,1.81e-11,1;UBERON:0001256,1.81e-11,1;UBERON:0001259,1.81e-11,1;UBERON:0010323,2.18e-09,11;UBERON:0003102,3.36e-09,99;UBERON:0000365,3.90e-09,5;UBERON:0005910,9.33e-08,6;UBERON:0011137,1.77e-07,14;UBERON:0001003,8.81e-07,15;UBERON:0007376,8.81e-07,15;UBERON:0007383,8.81e-07,15 | |||
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|short_description=p4@uc001dqd.1 | |short_description=p4@uc001dqd.1 | ||
}} | }} |
Latest revision as of 11:27, 28 July 2015
Short description: | p4@uc001dqd.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc001dqd.1_5end |
Coexpression cluster: | C4010_ductal_giant_squamous_Tracheal_bronchogenic_Keratinocyte_amniotic |
Association with transcript: | 54bp_to_uc001dqd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 8.64e-25 | 4 |
splanchnocranium | 8.64e-25 | 4 |
skin gland | 1.73e-21 | 2 |
epidermis gland | 1.73e-21 | 2 |
gland of integumental system | 1.73e-21 | 2 |
sebaceous gland | 1.73e-21 | 2 |
skin sebaceous gland | 1.73e-21 | 2 |
sweat gland | 1.73e-21 | 2 |
sweat gland placode | 1.73e-21 | 2 |
sebaceous gland placode | 1.73e-21 | 2 |
primary subdivision of cranial skeletal system | 5.74e-20 | 5 |
protuberance | 9.55e-17 | 6 |
pharyngeal arch | 9.55e-17 | 6 |
embryonic head | 9.55e-17 | 6 |
trachea | 4.55e-14 | 7 |
respiratory airway | 4.55e-14 | 7 |
tracheobronchial tree | 1.62e-11 | 15 |
lower respiratory tract | 1.62e-11 | 15 |
urinary bladder urothelium | 1.81e-11 | 1 |
wall of urinary bladder | 1.81e-11 | 1 |
mucosa of urinary bladder | 1.81e-11 | 1 |
cranial skeletal system | 2.18e-09 | 11 |
surface structure | 3.36e-09 | 99 |
urothelium | 3.90e-09 | 5 |
transitional epithelium | 9.33e-08 | 6 |
axial skeletal system | 1.77e-07 | 14 |
skin epidermis | 8.81e-07 | 15 |
outer epithelium | 8.81e-07 | 15 |
enveloping layer of ectoderm | 8.81e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 8.93e-07 | 2 |
pancreatic carcinoma | 8.93e-07 | 2 |
pancreatic ductal adenocarcinoma | 8.93e-07 | 2 |