FFCP PHASE1:Hg19::chr20:21143580..21143595,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:21143580..21143595,+
|short_description=p@chr20:21143580..21143595,+
|description=CAGE_peak_at_chr20:21143580..21143595,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:21143580..21143595,+ | |||
|coexpression_cluster_id=C1670 | |||
|description=CAGE_peak_at_chr20:21143580..21143595,+ | |||
|id=chr20:21143580..21143595,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.02e-22!43;CL:0000223!3.14e-16!59;CL:0002159!3.15e-15!13;CL:0002368!2.65e-14!13;CL:0000066!3.43e-13!254;CL:0002166!3.45e-11!3;CL:0002621!7.79e-11!3;CL:0002251!9.62e-11!21;CL:0000240!5.73e-09!6;CL:0000311!5.73e-09!6;CL:0000079!5.73e-09!6;CL:0000237!5.73e-09!6;CL:0000036!5.73e-09!6;CL:0000357!5.73e-09!6;CL:0000114!5.73e-09!6;CL:0000244!2.92e-08!4;CL:0000731!2.92e-08!4;CL:0002327!6.20e-08!4;CL:0000076!7.37e-08!62;CL:0000362!9.63e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.66e-25;14!CL:0002166;4.95e-24;3!CL:0002621;4.16e-23;3!CL:0002076;8.07e-23;42!CL:0000240;1.56e-19;6!CL:0000311;1.56e-19;6!CL:0000079;1.56e-19;6!CL:0000237;1.56e-19;6!CL:0000244;1.02e-17;4!CL:0000731;1.02e-17;4!CL:0002251;2.54e-17;20!CL:0000312;1.23e-13;5!CL:0000362;3.05e-13;9!CL:0000307;7.66e-11;3!CL:0002231;1.26e-10;3!CL:0002368;3.21e-09;13!CL:0002077;3.25e-09;34!CL:0002336;1.37e-08;1!CL:0002261;1.37e-08;1!CL:0002170;1.37e-08;1!CL:0002327;2.40e-08;4!CL:0000622;7.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.63e-27,42;CL:0002159,1.54e-25,14;CL:0002166,4.97e-24,3;CL:0002621,3.33e-23,3;CL:0000240,1.11e-19,6;CL:0000311,1.11e-19,6;CL:0000079,1.11e-19,6;CL:0000237,1.11e-19,6;CL:0000036,1.11e-19,6;CL:0000357,1.11e-19,6;CL:0000114,1.11e-19,6;CL:0000223,5.94e-19,58;CL:0000244,1.11e-17,4;CL:0000731,1.11e-17,4;CL:0002251,2.18e-17,20;CL:0000066,1.15e-15,253;CL:0000312,1.16e-13,5;CL:0000362,2.86e-13,9;CL:0000068,9.82e-11,3;CL:0000069,9.82e-11,3;CL:0002231,9.82e-11,3;CL:0000307,9.82e-11,3;CL:0000377,9.82e-11,3;CL:0002077,4.71e-10,34;CL:0002321,4.07e-09,250;CL:0002368,4.09e-09,13;CL:0002336,9.02e-09,1;CL:0002261,9.02e-09,1;CL:0002170,9.02e-09,1;CL:0002327,2.49e-08,4;CL:0000622,8.92e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;1.56e-19;6!CL:0000114;1.56e-19;6!CL:0000377;7.66e-11;3!CL:0000223;3.61e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!2.18e-16!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!6.40e-13!6;UBERON:0001949!7.79e-11!3;UBERON:0001004!1.04e-10!72;UBERON:0000365!1.41e-10!5;UBERON:0003729!1.77e-10!5;UBERON:0000161!1.32e-08!35;UBERON:0001708!1.80e-08!4;UBERON:0001704!1.80e-08!4;UBERON:0000166!1.94e-08!21;UBERON:0001911!6.20e-08!4;UBERON:0005333!6.20e-08!4;UBERON:0008425!6.20e-08!4;UBERON:0005311!6.20e-08!4;UBERON:0004119!7.36e-08!169;UBERON:0000925!7.36e-08!169;UBERON:0006595!7.36e-08!169;UBERON:0003343!1.13e-07!4;UBERON:0004785!1.13e-07!4;UBERON:0000165!1.28e-07!28;UBERON:0000930!1.28e-07!28;UBERON:0000153!2.07e-07!129;UBERON:0007811!2.07e-07!129;UBERON:0000974!3.06e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.16e-23;3!UBERON:0000486;3.61e-22;12!UBERON:0003729;4.46e-20;13!UBERON:0001708;3.55e-18;4!UBERON:0008895;3.55e-18;4!UBERON:0011159;1.18e-14;5!UBERON:0000365;2.73e-14;5!UBERON:0000161;1.35e-13;19!UBERON:0000166;1.35e-13;19!UBERON:0000344;6.84e-13;20!UBERON:0000165;3.75e-12;28!UBERON:0005910;5.36e-12;6!UBERON:0010371;1.04e-10;31!UBERON:0003929;3.17e-10;7!UBERON:0003350;5.24e-09;8!UBERON:0001828;5.24e-09;8!UBERON:0001911;2.40e-08;4!UBERON:0003343;2.40e-08;4!UBERON:0004785;2.40e-08;4!UBERON:0001003;5.23e-08;15!UBERON:0007376;5.23e-08;15!UBERON:0011137;6.52e-07;11!UBERON:0010323;6.52e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.33e-23,3;UBERON:0003729,3.03e-20,13;UBERON:0001708,3.55e-18,4;UBERON:0008895,3.55e-18,4;UBERON:0003102,3.39e-16,99;UBERON:0011159,1.18e-14,5;UBERON:0000365,2.92e-14,5;UBERON:0000344,5.35e-13,20;UBERON:0010188,2.68e-12,6;UBERON:0002539,2.68e-12,6;UBERON:0008816,2.68e-12,6;UBERON:0000161,4.71e-12,36;UBERON:0005910,5.67e-12,6;UBERON:0000033,9.01e-12,56;UBERON:0000165,9.48e-12,29;UBERON:0000930,9.48e-12,29;UBERON:0000166,1.11e-11,22;UBERON:0000153,1.79e-10,62;UBERON:0007811,1.79e-10,62;UBERON:0003350,4.83e-09,8;UBERON:0001828,4.83e-09,8;UBERON:0004119,1.05e-08,160;UBERON:0000925,1.05e-08,160;UBERON:0006595,1.05e-08,160;UBERON:0003343,2.15e-08,4;UBERON:0004785,2.15e-08,4;UBERON:0001911,2.49e-08,4;UBERON:0005333,2.49e-08,4;UBERON:0008425,2.49e-08,4;UBERON:0005311,2.49e-08,4;UBERON:0001004,2.80e-08,74;UBERON:0001003,5.04e-08,15;UBERON:0007376,5.04e-08,15;UBERON:0007383,5.04e-08,15;UBERON:0010323,6.52e-07,11 | |||
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| ||
|short_description=p@chr20:21143580..21143595,+ | |||
}} | }} |
Latest revision as of 12:22, 28 July 2015
Short description: | p@chr20:21143580..21143595, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21143580..21143595, + |
Coexpression cluster: | C1670_Urothelial_Mallassezderived_squamous_Gingival_Mammary_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.33e-23 | 3 |
mouth mucosa | 3.03e-20 | 13 |
jaw skeleton | 3.55e-18 | 4 |
splanchnocranium | 3.55e-18 | 4 |
surface structure | 3.39e-16 | 99 |
primary subdivision of cranial skeletal system | 1.18e-14 | 5 |
urothelium | 2.92e-14 | 5 |
mucosa | 5.35e-13 | 20 |
protuberance | 2.68e-12 | 6 |
pharyngeal arch | 2.68e-12 | 6 |
embryonic head | 2.68e-12 | 6 |
orifice | 4.71e-12 | 36 |
transitional epithelium | 5.67e-12 | 6 |
head | 9.01e-12 | 56 |
mouth | 9.48e-12 | 29 |
stomodeum | 9.48e-12 | 29 |
oral opening | 1.11e-11 | 22 |
anterior region of body | 1.79e-10 | 62 |
craniocervical region | 1.79e-10 | 62 |
epithelium of mucosa | 4.83e-09 | 8 |
gingiva | 4.83e-09 | 8 |
endoderm-derived structure | 1.05e-08 | 160 |
endoderm | 1.05e-08 | 160 |
presumptive endoderm | 1.05e-08 | 160 |
mucosa of oral region | 2.15e-08 | 4 |
respiratory system mucosa | 2.15e-08 | 4 |
mammary gland | 2.49e-08 | 4 |
mammary bud | 2.49e-08 | 4 |
mammary ridge | 2.49e-08 | 4 |
mammary placode | 2.49e-08 | 4 |
respiratory system | 2.80e-08 | 74 |
skin epidermis | 5.04e-08 | 15 |
outer epithelium | 5.04e-08 | 15 |
enveloping layer of ectoderm | 5.04e-08 | 15 |
cranial skeletal system | 6.52e-07 | 11 |