FFCP PHASE1:Hg19::chr20:48925166..48925179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48925166..48925179,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_at_chr20:48925166..48925179,- | |description=CAGE_peak_at_chr20:48925166..48925179,- | ||
|id=chr20:48925166..48925179,- | |id=chr20:48925166..48925179,- | ||
|ontology_enrichment_celltype=CL:0000860!7.14e-55!45;CL:0002057!9.90e-54!42;CL:0000766!1.49e-38!76;CL:0002194!7.08e-37!63;CL:0000576!7.08e-37!63;CL:0000040!7.08e-37!63;CL:0000559!7.08e-37!63;CL:0002009!2.21e-35!65;CL:0000839!5.06e-32!70;CL:0000557!2.09e-31!71;CL:0000763!5.75e-22!112;CL:0000049!5.75e-22!112;CL:0000738!6.03e-19!140;CL:0002087!3.15e-18!119;CL:0002031!4.07e-14!124;CL:0000037!5.47e-13!172;CL:0000566!5.47e-13!172;CL:0002032!9.40e-12!165;CL:0000837!9.40e-12!165;CL:0000988!1.38e-11!182;CL:0000134!5.99e-11!358;CL:0002320!2.17e-10!365;CL:0000048!4.99e-10!430;CL:0000723!1.28e-09!436;CL:0000034!4.33e-09!444;CL:0000219!1.87e-08!390 | |ontology_enrichment_celltype=CL:0000860!7.14e-55!45;CL:0002057!9.90e-54!42;CL:0000766!1.49e-38!76;CL:0002194!7.08e-37!63;CL:0000576!7.08e-37!63;CL:0000040!7.08e-37!63;CL:0000559!7.08e-37!63;CL:0002009!2.21e-35!65;CL:0000839!5.06e-32!70;CL:0000557!2.09e-31!71;CL:0000763!5.75e-22!112;CL:0000049!5.75e-22!112;CL:0000738!6.03e-19!140;CL:0002087!3.15e-18!119;CL:0002031!4.07e-14!124;CL:0000037!5.47e-13!172;CL:0000566!5.47e-13!172;CL:0002032!9.40e-12!165;CL:0000837!9.40e-12!165;CL:0000988!1.38e-11!182;CL:0000134!5.99e-11!358;CL:0002320!2.17e-10!365;CL:0000048!4.99e-10!430;CL:0000723!1.28e-09!436;CL:0000034!4.33e-09!444;CL:0000219!1.87e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-104;33!CL:0002057;2.31e-104;33!CL:0000473;3.86e-72;39!CL:0000234;3.86e-72;39!CL:0000576;1.53e-47;48!CL:0000766;1.31e-32;69!CL:0000763;3.89e-15;100!CL:0000771;1.60e-13;2!CL:0002087;8.97e-12;104!CL:0000738;8.11e-09;136!CL:0000094;2.12e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.92e-90,42;CL:0002057,2.92e-90,42;CL:0000473,2.37e-78,48;CL:0000234,2.37e-78,48;CL:0000766,3.57e-63,72;CL:0002194,1.14e-61,59;CL:0000576,1.14e-61,59;CL:0000040,1.14e-61,59;CL:0000559,1.14e-61,59;CL:0002009,1.62e-59,61;CL:0000839,1.07e-54,66;CL:0000557,8.13e-54,67;CL:0000763,1.61e-40,108;CL:0000049,1.61e-40,108;CL:0000738,4.08e-31,136;CL:0002087,2.05e-29,115;CL:0002031,5.52e-28,120;CL:0002032,1.85e-25,161;CL:0000837,1.85e-25,161;CL:0000037,3.57e-24,168;CL:0000988,1.14e-22,177;CL:0000771,1.30e-13,2;CL:0000134,2.24e-10,354;CL:0002320,4.64e-10,361;CL:0000219,6.04e-09,386;CL:0000048,2.11e-08,427;CL:0000723,3.35e-08,433;CL:0000034,6.09e-08,441;CL:0000094,1.72e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-67;42!CL:0000049;1.30e-13;108!UBERON:0003099;3.84e-07;1!UBERON:0003852;3.84e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.85e-29!102;UBERON:0003061!1.85e-29!102;UBERON:0002193!3.03e-28!112;UBERON:0002371!3.20e-28!80;UBERON:0001474!4.31e-27!86;UBERON:0004765!8.49e-24!101;UBERON:0001434!8.49e-24!101;UBERON:0002405!4.86e-23!115;UBERON:0003081!4.44e-17!216;UBERON:0002204!1.84e-14!167;UBERON:0002384!3.75e-10!375;UBERON:0000926!1.30e-09!448;UBERON:0004120!1.30e-09!448;UBERON:0006603!1.30e-09!448 | |ontology_enrichment_uberon=UBERON:0002390!1.85e-29!102;UBERON:0003061!1.85e-29!102;UBERON:0002193!3.03e-28!112;UBERON:0002371!3.20e-28!80;UBERON:0001474!4.31e-27!86;UBERON:0004765!8.49e-24!101;UBERON:0001434!8.49e-24!101;UBERON:0002405!4.86e-23!115;UBERON:0003081!4.44e-17!216;UBERON:0002204!1.84e-14!167;UBERON:0002384!3.75e-10!375;UBERON:0000926!1.30e-09!448;UBERON:0004120!1.30e-09!448;UBERON:0006603!1.30e-09!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;3.84e-07;1!UBERON:0008193;3.84e-07;1!UBERON:0010912;3.84e-07;1!UBERON:0002514;3.84e-07;1!UBERON:0003457;3.84e-07;1!UBERON:0008907;3.84e-07;1!UBERON:0008001;3.84e-07;1!UBERON:0007213;3.84e-07;1!UBERON:0009891;3.84e-07;1!UBERON:0007914;3.84e-07;1!UBERON:0007375;3.84e-07;1!UBERON:0003323;3.84e-07;1!UBERON:0010258;3.84e-07;1!UBERON:0005253;3.84e-07;1!UBERON:0007842;3.84e-07;1!UBERON:0002397;3.84e-07;1!UBERON:0003113;3.84e-07;1!UBERON:0003277;3.84e-07;1!UBERON:0001709;3.84e-07;1!UBERON:0002244;3.84e-07;1!UBERON:0005620;3.84e-07;1!UBERON:0010364;3.84e-07;1!UBERON:0004288;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.28e-47,76;UBERON:0001474,9.97e-47,82;UBERON:0004765,3.70e-42,90;UBERON:0002390,1.79e-41,98;UBERON:0003061,1.79e-41,98;UBERON:0002405,1.64e-37,93;UBERON:0001434,1.83e-37,100;UBERON:0002193,3.55e-37,108;UBERON:0002204,3.23e-22,167;UBERON:0003081,7.12e-19,203;UBERON:0000926,3.56e-10,315;UBERON:0004120,3.56e-10,315;UBERON:0006603,3.56e-10,315;UBERON:0002384,1.25e-09,371;UBERON:0005705,6.20e-07,1;UBERON:0008193,6.20e-07,1;UBERON:0010912,6.20e-07,1;UBERON:0002514,6.20e-07,1;UBERON:0003457,6.20e-07,1;UBERON:0008907,6.20e-07,1;UBERON:0008001,6.20e-07,1;UBERON:0007213,6.20e-07,1;UBERON:0009891,6.20e-07,1;UBERON:0007914,6.20e-07,1;UBERON:0009292,6.20e-07,1;UBERON:0003099,6.20e-07,1;UBERON:0007375,6.20e-07,1;UBERON:0003323,6.20e-07,1;UBERON:0010258,6.20e-07,1;UBERON:0007842,6.20e-07,1;UBERON:0009494,6.20e-07,1;UBERON:0010042,6.20e-07,1;UBERON:0010045,6.20e-07,1;UBERON:0010259,6.20e-07,1;UBERON:0010359,6.20e-07,1;UBERON:0009526,6.20e-07,1;UBERON:0002397,6.20e-07,1;UBERON:0003113,6.20e-07,1;UBERON:0003277,6.20e-07,1;UBERON:0001709,6.20e-07,1;UBERON:0004066,6.20e-07,1;UBERON:0002244,6.20e-07,1;UBERON:0005620,6.20e-07,1;UBERON:0004362,6.20e-07,1;UBERON:0010364,6.20e-07,1;UBERON:0010046,6.20e-07,1;UBERON:0005868,6.20e-07,1;UBERON:0007238,6.20e-07,1;UBERON:0004288,6.20e-07,1;UBERON:0004068,6.20e-07,1;UBERON:0010334,6.20e-07,1;UBERON:0003852,6.20e-07,1;UBERON:0010253,6.20e-07,1 | |||
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|short_description=p@chr20:48925166..48925179,- | |short_description=p@chr20:48925166..48925179,- | ||
}} | }} |
Latest revision as of 15:13, 28 July 2015
Short description: | p@chr20:48925166..48925179, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48925166..48925179, - |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.92e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.92e-90 | 42 |
defensive cell | 2.37e-78 | 48 |
phagocyte | 2.37e-78 | 48 |
myeloid leukocyte | 3.57e-63 | 72 |
monopoietic cell | 1.14e-61 | 59 |
monocyte | 1.14e-61 | 59 |
monoblast | 1.14e-61 | 59 |
promonocyte | 1.14e-61 | 59 |
macrophage dendritic cell progenitor | 1.62e-59 | 61 |
myeloid lineage restricted progenitor cell | 1.07e-54 | 66 |
granulocyte monocyte progenitor cell | 8.13e-54 | 67 |
myeloid cell | 1.61e-40 | 108 |
common myeloid progenitor | 1.61e-40 | 108 |
leukocyte | 4.08e-31 | 136 |
nongranular leukocyte | 2.05e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 5.52e-28 | 120 |
hematopoietic oligopotent progenitor cell | 1.85e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-25 | 161 |
hematopoietic stem cell | 3.57e-24 | 168 |
hematopoietic cell | 1.14e-22 | 177 |
eosinophil | 1.30e-13 | 2 |
mesenchymal cell | 2.24e-10 | 354 |
connective tissue cell | 4.64e-10 | 361 |
motile cell | 6.04e-09 | 386 |
multi fate stem cell | 2.11e-08 | 427 |
somatic stem cell | 3.35e-08 | 433 |
stem cell | 6.09e-08 | 441 |
granulocyte | 1.72e-07 | 8 |