FFCP PHASE1:Hg19::chr2:172953513..172953549,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:172953513..172953549,- to FFCP PHASE1:Hg19::chr2:172953513..172953549,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:172953513..172953549,- | |||
|description=CAGE_peak_at_chr2:172953513..172953549,- | |||
|id=chr2:172953513..172953549,- | |||
|ontology_enrichment_celltype=CL:0002556!2.13e-21!6;CL:0002552!6.51e-19!5;CL:0000057!2.94e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002552;2.63e-43;5!CL:0002556;6.21e-35;6!CL:0000057;9.61e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.63e-43,5;CL:0002556,5.69e-35,6;CL:0000057,2.01e-10,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.11e-14;1!UBERON:0003852;2.11e-14;1!UBERON:0010122;7.52e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!2.13e-21!6;UBERON:0003672!2.13e-21!6;UBERON:0000165!4.29e-19!28;UBERON:0000930!4.29e-19!28;UBERON:0000033!2.22e-17!123;UBERON:0000153!3.09e-16!129;UBERON:0007811!3.09e-16!129;UBERON:0003129!2.41e-15!11;UBERON:0002780!2.08e-14!41;UBERON:0001890!2.08e-14!41;UBERON:0006240!2.08e-14!41;UBERON:0003080!5.42e-14!42;UBERON:0001444!2.56e-13!48;UBERON:0000075!8.19e-13!13;UBERON:0005944!8.19e-13!13;UBERON:0004288!8.19e-13!13;UBERON:0003089!8.19e-13!13;UBERON:0007023!9.53e-13!115;UBERON:0001869!5.89e-12!32;UBERON:0001828!1.14e-11!8;UBERON:0000078!1.79e-11!18;UBERON:0004121!1.84e-11!169;UBERON:0001893!3.98e-11!34;UBERON:0000924!4.95e-11!173;UBERON:0006601!4.95e-11!173;UBERON:0005383!6.39e-11!3;UBERON:0005382!6.39e-11!3;UBERON:0003056!5.78e-10!61;UBERON:0002791!1.19e-09!33;UBERON:0001049!1.73e-09!57;UBERON:0005068!1.73e-09!57;UBERON:0006241!1.73e-09!57;UBERON:0007135!1.73e-09!57;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0002616!4.63e-09!59;UBERON:0003102!7.98e-09!95;UBERON:0000369!2.71e-08!4;UBERON:0002435!2.71e-08!4;UBERON:0000204!2.71e-08!4;UBERON:0010082!2.71e-08!4;UBERON:0000481!3.72e-08!347;UBERON:0001897!4.62e-08!2;UBERON:0009663!5.10e-08!7;UBERON:0001873!9.23e-08!2;UBERON:0010122!9.23e-08!2;UBERON:0000166!1.26e-07!21;UBERON:0000955!3.71e-07!69;UBERON:0006238!3.71e-07!69;UBERON:0000062!4.20e-07!511;UBERON:0003075!5.15e-07!86;UBERON:0007284!5.15e-07!86;UBERON:0005743!6.79e-07!86;UBERON:0000477!6.97e-07!286;UBERON:0001950!8.14e-07!20;UBERON:0000073!8.70e-07!94;UBERON:0001016!8.70e-07!94;UBERON:0000161!9.00e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;6.21e-35;6!UBERON:0003672;6.21e-35;6!UBERON:0003129;5.18e-30;7!UBERON:0011137;1.53e-29;11!UBERON:0010323;1.53e-29;11!UBERON:0000165;1.72e-29;28!UBERON:0001828;3.04e-27;8!UBERON:0000075;2.38e-20;16!UBERON:0001444;5.52e-17;48!UBERON:0003729;6.58e-17;13!UBERON:0007811;4.07e-15;52!UBERON:0005705;2.11e-14;1!UBERON:0008193;2.11e-14;1!UBERON:0010912;2.11e-14;1!UBERON:0002514;2.11e-14;1!UBERON:0003457;2.11e-14;1!UBERON:0008907;2.11e-14;1!UBERON:0008001;2.11e-14;1!UBERON:0007213;2.11e-14;1!UBERON:0009891;2.11e-14;1!UBERON:0007914;2.11e-14;1!UBERON:0007375;2.11e-14;1!UBERON:0003323;2.11e-14;1!UBERON:0010258;2.11e-14;1!UBERON:0005253;2.11e-14;1!UBERON:0007842;2.11e-14;1!UBERON:0002397;2.11e-14;1!UBERON:0003113;2.11e-14;1!UBERON:0003277;2.11e-14;1!UBERON:0001709;2.11e-14;1!UBERON:0002244;2.11e-14;1!UBERON:0005620;2.11e-14;1!UBERON:0010364;2.11e-14;1!UBERON:0004288;2.11e-14;1!UBERON:0000033;3.72e-14;50!UBERON:0001555;1.38e-12;54!UBERON:0000161;1.16e-11;19!UBERON:0000166;1.16e-11;19!UBERON:0000344;4.33e-11;20!UBERON:0000153;1.78e-10;54!UBERON:0001434;3.93e-09;36!UBERON:0001873;7.52e-08;2!UBERON:0004089;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,6.44e-36,29;UBERON:0000930,6.44e-36,29;UBERON:0001758,5.69e-35,6;UBERON:0003672,5.69e-35,6;UBERON:0003129,4.81e-30,7;UBERON:0010323,1.44e-29,11;UBERON:0001828,3.05e-27,8;UBERON:0011137,2.92e-23,14;UBERON:0001444,6.30e-21,49;UBERON:0000075,2.29e-20,16;UBERON:0000033,3.34e-18,56;UBERON:0003729,6.58e-17,13;UBERON:0000153,2.36e-16,62;UBERON:0007811,2.36e-16,62;UBERON:0000166,3.16e-15,22;UBERON:0005705,2.11e-14,1;UBERON:0008193,2.11e-14,1;UBERON:0010912,2.11e-14,1;UBERON:0002514,2.11e-14,1;UBERON:0003457,2.11e-14,1;UBERON:0008907,2.11e-14,1;UBERON:0008001,2.11e-14,1;UBERON:0007213,2.11e-14,1;UBERON:0009891,2.11e-14,1;UBERON:0007914,2.11e-14,1;UBERON:0009292,2.11e-14,1;UBERON:0003099,2.11e-14,1;UBERON:0007375,2.11e-14,1;UBERON:0003323,2.11e-14,1;UBERON:0010258,2.11e-14,1;UBERON:0007842,2.11e-14,1;UBERON:0009494,2.11e-14,1;UBERON:0010042,2.11e-14,1;UBERON:0010045,2.11e-14,1;UBERON:0010259,2.11e-14,1;UBERON:0010359,2.11e-14,1;UBERON:0009526,2.11e-14,1;UBERON:0002397,2.11e-14,1;UBERON:0003113,2.11e-14,1;UBERON:0003277,2.11e-14,1;UBERON:0001709,2.11e-14,1;UBERON:0004066,2.11e-14,1;UBERON:0002244,2.11e-14,1;UBERON:0005620,2.11e-14,1;UBERON:0004362,2.11e-14,1;UBERON:0010364,2.11e-14,1;UBERON:0010046,2.11e-14,1;UBERON:0005868,2.11e-14,1;UBERON:0007238,2.11e-14,1;UBERON:0004288,2.11e-14,1;UBERON:0004068,2.11e-14,1;UBERON:0010334,2.11e-14,1;UBERON:0003852,2.11e-14,1;UBERON:0010253,2.11e-14,1;UBERON:0000344,4.33e-11,20;UBERON:0003102,6.93e-10,99;UBERON:0004121,1.44e-09,171;UBERON:0000924,1.44e-09,171;UBERON:0006601,1.44e-09,171;UBERON:0000161,2.71e-09,36;UBERON:0001007,6.01e-08,145;UBERON:0001555,6.01e-08,145;UBERON:0007026,6.01e-08,145;UBERON:0001873,7.03e-08,2;UBERON:0010122,7.03e-08,2;UBERON:0005253,7.52e-08,2;UBERON:0004089,7.52e-08,2;UBERON:0004119,4.30e-07,160;UBERON:0000925,4.30e-07,160;UBERON:0006595,4.30e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,4.28723759635276,4.91337269247072,7.54278202583088,2.37600571456411,0.989067717114227,0,0,1.85169725349473,0.875829639103749,1.93944880838928,1.75591048352335,0.30648779579902,1.35214253015937,0,0.179389635688862,0.213557388818567,0,0,0,0,0.744467425326359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,1.76337971845342,0.3062454773532,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.627944742804112,0.471346769748006,0,0,0,0,0.142953088353313,0,1.74362138052188,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,9.94753875806841,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0.25458863311266,0,0.653150243690884,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,4.28723759635276,4.91337269247072,7.54278202583088,2.37600571456411,0.989067717114227,0,0,1.85169725349473,0.875829639103749,1.93944880838928,1.75591048352335,0.30648779579902,1.35214253015937,0,0.179389635688862,0.213557388818567,0,0,0,0,0.744467425326359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,1.76337971845342,0.3062454773532,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.627944742804112,0.471346769748006,0,0,0,0,0.142953088353313,0,1.74362138052188,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,9.94753875806841,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0.25458863311266,0,0.653150243690884,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr2:172953513..172953549,- | |||
}} | }} |
Latest revision as of 02:28, 29 July 2015
Short description: | p@chr2:172953513..172953549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:172953513..172953549, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.63e-43 | 5 |
fibroblast of periodontium | 5.69e-35 | 6 |
fibroblast | 2.01e-10 | 76 |