FFCP PHASE1:Hg19::chr7:27162134..27162170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000521159_5end | |association_with_transcript=0bp_to_ENST00000521159_5end | ||
|cluster_id=chr7:27162134..27162170,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_1_at_ENST00000521159_5end | |description=CAGE_peak_1_at_ENST00000521159_5end | ||
|id=chr7:27162134..27162170,+ | |id=chr7:27162134..27162170,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.07e-27!12;CL:1000494!3.07e-27!12;CL:1000497!1.47e-24!18;CL:0002518!1.47e-24!18;CL:1000449!1.49e-23!16;CL:0002681!3.18e-16!13;CL:0002584!3.18e-16!13;CL:0000239!2.52e-09!3;CL:1000615!2.52e-09!3;CL:0002306!2.52e-09!3;CL:0000066!1.23e-08!254;CL:0002563!3.18e-07!4 | |ontology_enrichment_celltype=CL:1000507!3.07e-27!12;CL:1000494!3.07e-27!12;CL:1000497!1.47e-24!18;CL:0002518!1.47e-24!18;CL:1000449!1.49e-23!16;CL:0002681!3.18e-16!13;CL:0002584!3.18e-16!13;CL:0000239!2.52e-09!3;CL:1000615!2.52e-09!3;CL:0002306!2.52e-09!3;CL:0000066!1.23e-08!254;CL:0002563!3.18e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.58e-27;10!CL:1000494;4.58e-27;10!CL:1000497;1.71e-20;17!CL:0002518;1.71e-20;17!CL:1000449;8.99e-18;15!CL:0000650;2.16e-12;2!CL:1000500;2.16e-12;2!CL:1000618;2.16e-12;2!CL:1001318;2.16e-12;2!CL:0002173;2.16e-12;2!CL:0000239;2.85e-08;3!CL:1000615;2.85e-08;3!CL:0002306;2.85e-08;3!CL:0000182;3.26e-08;12!CL:0002681;1.22e-07;12!CL:0002584;1.22e-07;12!CL:0000313;2.37e-07;1!CL:0002563;7.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.49e-27,10;CL:1000494,4.49e-27,10;CL:1000497,1.71e-20,17;CL:0002518,1.71e-20,17;CL:1000449,8.88e-18,15;CL:0000066,2.18e-12,253;CL:0000650,2.42e-12,2;CL:1000500,2.42e-12,2;CL:1000618,2.42e-12,2;CL:1001318,2.42e-12,2;CL:0002173,2.42e-12,2;CL:0000223,3.01e-10,58;CL:0000239,2.19e-08,3;CL:1000615,2.19e-08,3;CL:0002306,2.19e-08,3;CL:0000182,3.20e-08,12;CL:0002681,1.12e-07,12;CL:0002584,1.12e-07,12;CL:0000313,2.52e-07,1;CL:0002563,6.90e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.23e-14;31!UBERON:0004161;5.92e-09;11!UBERON:0009497;1.39e-07;13 | |||
|ontology_enrichment_disease=DOID:299!7.18e-12!25;DOID:3119!1.38e-11!14;DOID:305!1.66e-09!106;DOID:0050687!2.07e-08!143;DOID:4468!6.60e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:299;3.11e-17;25!DOID:4468;3.52e-12;2!DOID:2152;2.37e-07;1!DOID:3119;8.64e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.93e-17,25;DOID:305,6.31e-14,106;DOID:4468,3.05e-12,2;DOID:0050687,1.34e-10,143;DOID:2152,2.52e-07,1;DOID:3119,7.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.42e-27!26;UBERON:0009773!3.07e-27!12;UBERON:0001231!3.07e-27!12;UBERON:0004810!3.07e-27!12;UBERON:0006555!4.79e-26!17;UBERON:0005103!4.79e-26!17;UBERON:0000083!4.79e-26!17;UBERON:0009201!4.79e-26!17;UBERON:0004819!4.79e-26!17;UBERON:0006553!4.79e-26!17;UBERON:0003074!4.79e-26!17;UBERON:0003060!4.79e-26!17;UBERON:0000080!2.06e-24!18;UBERON:0002120!2.06e-24!18;UBERON:0004875!2.06e-24!18;UBERON:0005721!2.06e-24!18;UBERON:0005754!2.06e-24!18;UBERON:0007297!2.06e-24!18;UBERON:0002113!6.06e-24!27;UBERON:0003918!6.06e-24!27;UBERON:0005095!6.06e-24!27;UBERON:0007687!6.06e-24!27;UBERON:0004211!1.49e-23!16;UBERON:0001285!1.49e-23!16;UBERON:0007684!1.49e-23!16;UBERON:0003220!1.49e-23!16;UBERON:0004208!1.49e-23!16;UBERON:0000489!4.03e-22!32;UBERON:0004876!1.22e-21!20;UBERON:0003887!1.89e-20!21;UBERON:0005172!4.49e-20!55;UBERON:0005173!4.49e-20!55;UBERON:0002417!1.68e-17!61;UBERON:0000916!1.68e-17!61;UBERON:0006554!7.81e-17!44;UBERON:0001008!2.36e-16!45;UBERON:0001225!3.18e-16!13;UBERON:0008987!3.18e-16!13;UBERON:0005177!7.22e-15!107;UBERON:0000353!1.01e-14!17;UBERON:0000466!1.89e-14!126;UBERON:0003064!7.26e-14!37;UBERON:0005409!7.68e-14!35;UBERON:0001851!7.73e-13!16;UBERON:0000160!7.52e-12!27;UBERON:0009569!2.04e-11!113;UBERON:0003886!2.13e-11!63;UBERON:0004921!1.82e-10!129;UBERON:0004185!1.82e-10!129;UBERON:0002553!8.69e-10!70;UBERON:0006853!2.52e-09!3;UBERON:0007685!2.52e-09!3;UBERON:0004134!2.52e-09!3;UBERON:0000464!2.98e-09!104;UBERON:0009856!4.73e-09!26;UBERON:0003103!5.11e-09!69;UBERON:0003104!8.08e-09!238;UBERON:0009142!8.08e-09!238;UBERON:0000059!9.99e-09!11;UBERON:0009854!1.76e-08!23;UBERON:0007499!9.41e-08!25;UBERON:0001155!1.37e-07!9;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0000481!2.46e-07!347;UBERON:0001242!3.18e-07!4;UBERON:0001262!3.18e-07!4;UBERON:0004786!3.18e-07!4;UBERON:0004808!3.18e-07!4;UBERON:0001277!3.18e-07!4;UBERON:0008835!3.65e-07!22;UBERON:0003894!3.65e-07!22;UBERON:0003914!5.69e-07!118 | |ontology_enrichment_uberon=UBERON:0000058!1.42e-27!26;UBERON:0009773!3.07e-27!12;UBERON:0001231!3.07e-27!12;UBERON:0004810!3.07e-27!12;UBERON:0006555!4.79e-26!17;UBERON:0005103!4.79e-26!17;UBERON:0000083!4.79e-26!17;UBERON:0009201!4.79e-26!17;UBERON:0004819!4.79e-26!17;UBERON:0006553!4.79e-26!17;UBERON:0003074!4.79e-26!17;UBERON:0003060!4.79e-26!17;UBERON:0000080!2.06e-24!18;UBERON:0002120!2.06e-24!18;UBERON:0004875!2.06e-24!18;UBERON:0005721!2.06e-24!18;UBERON:0005754!2.06e-24!18;UBERON:0007297!2.06e-24!18;UBERON:0002113!6.06e-24!27;UBERON:0003918!6.06e-24!27;UBERON:0005095!6.06e-24!27;UBERON:0007687!6.06e-24!27;UBERON:0004211!1.49e-23!16;UBERON:0001285!1.49e-23!16;UBERON:0007684!1.49e-23!16;UBERON:0003220!1.49e-23!16;UBERON:0004208!1.49e-23!16;UBERON:0000489!4.03e-22!32;UBERON:0004876!1.22e-21!20;UBERON:0003887!1.89e-20!21;UBERON:0005172!4.49e-20!55;UBERON:0005173!4.49e-20!55;UBERON:0002417!1.68e-17!61;UBERON:0000916!1.68e-17!61;UBERON:0006554!7.81e-17!44;UBERON:0001008!2.36e-16!45;UBERON:0001225!3.18e-16!13;UBERON:0008987!3.18e-16!13;UBERON:0005177!7.22e-15!107;UBERON:0000353!1.01e-14!17;UBERON:0000466!1.89e-14!126;UBERON:0003064!7.26e-14!37;UBERON:0005409!7.68e-14!35;UBERON:0001851!7.73e-13!16;UBERON:0000160!7.52e-12!27;UBERON:0009569!2.04e-11!113;UBERON:0003886!2.13e-11!63;UBERON:0004921!1.82e-10!129;UBERON:0004185!1.82e-10!129;UBERON:0002553!8.69e-10!70;UBERON:0006853!2.52e-09!3;UBERON:0007685!2.52e-09!3;UBERON:0004134!2.52e-09!3;UBERON:0000464!2.98e-09!104;UBERON:0009856!4.73e-09!26;UBERON:0003103!5.11e-09!69;UBERON:0003104!8.08e-09!238;UBERON:0009142!8.08e-09!238;UBERON:0000059!9.99e-09!11;UBERON:0009854!1.76e-08!23;UBERON:0007499!9.41e-08!25;UBERON:0001155!1.37e-07!9;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0000481!2.46e-07!347;UBERON:0001242!3.18e-07!4;UBERON:0001262!3.18e-07!4;UBERON:0004786!3.18e-07!4;UBERON:0004808!3.18e-07!4;UBERON:0001277!3.18e-07!4;UBERON:0008835!3.65e-07!22;UBERON:0003894!3.65e-07!22;UBERON:0003914!5.69e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.58e-27;10!UBERON:0009773;4.58e-27;10!UBERON:0001231;4.58e-27;10!UBERON:0004810;4.58e-27;10!UBERON:0002113;3.40e-22;24!UBERON:0011143;3.40e-22;24!UBERON:0000489;4.62e-18;29!UBERON:0006555;8.99e-18;15!UBERON:0004819;8.99e-18;15!UBERON:0001285;8.99e-18;15!UBERON:0007684;8.99e-18;15!UBERON:0006554;2.12e-17;30!UBERON:0001008;2.12e-17;30!UBERON:0005172;8.84e-13;52!UBERON:0005173;8.84e-13;52!UBERON:0003567;2.16e-12;2!UBERON:0003838;2.16e-12;2!UBERON:0003586;2.16e-12;2!UBERON:0005169;2.16e-12;2!UBERON:0002321;2.16e-12;2!UBERON:0005215;2.16e-12;2!UBERON:0002303;2.16e-12;2!UBERON:0002319;2.16e-12;2!UBERON:0002417;2.14e-09;58!UBERON:0000916;2.14e-09;58!UBERON:0005409;1.60e-08;22!UBERON:0006853;2.85e-08;3!UBERON:0007685;2.85e-08;3!UBERON:0004134;2.85e-08;3!UBERON:0000160;9.35e-08;17!UBERON:0001225;1.22e-07;12!UBERON:0008987;1.22e-07;12!UBERON:0004911;2.37e-07;1!UBERON:0001301;4.99e-07;1!UBERON:0001242;7.10e-07;4!UBERON:0001262;7.10e-07;4!UBERON:0004786;7.10e-07;4!UBERON:0004808;7.10e-07;4!UBERON:0001277;7.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.49e-27,10;UBERON:0002113,1.13e-24,26;UBERON:0003918,1.13e-24,26;UBERON:0011143,1.13e-24,26;UBERON:0005095,1.13e-24,26;UBERON:0007687,1.13e-24,26;UBERON:0006555,1.22e-21,16;UBERON:0004819,1.22e-21,16;UBERON:0005172,4.59e-21,54;UBERON:0005173,4.59e-21,54;UBERON:0000489,2.32e-20,31;UBERON:0002417,1.21e-18,60;UBERON:0000916,1.21e-18,60;UBERON:0004211,8.88e-18,15;UBERON:0009773,8.88e-18,15;UBERON:0001231,8.88e-18,15;UBERON:0001285,8.88e-18,15;UBERON:0007684,8.88e-18,15;UBERON:0004208,8.88e-18,15;UBERON:0006554,2.53e-15,47;UBERON:0001008,5.91e-15,48;UBERON:0005177,1.10e-14,101;UBERON:0003567,2.42e-12,2;UBERON:0003838,2.42e-12,2;UBERON:0003586,2.42e-12,2;UBERON:0005169,2.42e-12,2;UBERON:0002321,2.42e-12,2;UBERON:0005215,2.42e-12,2;UBERON:0002303,2.42e-12,2;UBERON:0002319,2.42e-12,2;UBERON:0009569,2.57e-11,112;UBERON:0006853,2.19e-08,3;UBERON:0007685,2.19e-08,3;UBERON:0004134,2.19e-08,3;UBERON:0003103,3.59e-08,68;UBERON:0003104,5.78e-08,160;UBERON:0009142,5.78e-08,160;UBERON:0000160,9.71e-08,17;UBERON:0001225,1.12e-07,12;UBERON:0008987,1.12e-07,12;UBERON:0005409,1.85e-07,25;UBERON:0004911,2.52e-07,1;UBERON:0001301,4.31e-07,1;UBERON:0005103,5.98e-07,8;UBERON:0000083,5.98e-07,8;UBERON:0009201,5.98e-07,8;UBERON:0006553,5.98e-07,8;UBERON:0003074,5.98e-07,8;UBERON:0003060,5.98e-07,8;UBERON:0001242,6.90e-07,4;UBERON:0001262,6.90e-07,4;UBERON:0004786,6.90e-07,4;UBERON:0004808,6.90e-07,4;UBERON:0001277,6.90e-07,4;UBERON:0001052,9.48e-07,4 | |||
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| ||
|short_description=p1@ENST00000521159 | |short_description=p1@ENST00000521159 | ||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p1@ENST00000521159 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000521159_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000521159_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.49e-27 | 10 |
nephron tubule epithelial cell | 4.49e-27 | 10 |
kidney cell | 1.71e-20 | 17 |
kidney epithelial cell | 1.71e-20 | 17 |
epithelial cell of nephron | 8.88e-18 | 15 |
epithelial cell | 2.18e-12 | 253 |
mesangial cell | 2.42e-12 | 2 |
kidney interstitial cell | 2.42e-12 | 2 |
juxtaglomerular complex cell | 2.42e-12 | 2 |
renal interstitial pericyte | 2.42e-12 | 2 |
extraglomerular mesangial cell | 2.42e-12 | 2 |
endodermal cell | 3.01e-10 | 58 |
brush border epithelial cell | 2.19e-08 | 3 |
kidney cortex tubule cell | 2.19e-08 | 3 |
epithelial cell of proximal tubule | 2.19e-08 | 3 |
hepatocyte | 3.20e-08 | 12 |
kidney cortical cell | 1.12e-07 | 12 |
renal cortical epithelial cell | 1.12e-07 | 12 |
serous secreting cell | 2.52e-07 | 1 |
intestinal epithelial cell | 6.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.93e-17 | 25 |
carcinoma | 6.31e-14 | 106 |
clear cell adenocarcinoma | 3.05e-12 | 2 |
cell type cancer | 1.34e-10 | 143 |
ovary epithelial cancer | 2.52e-07 | 1 |
gastrointestinal system cancer | 7.81e-07 | 14 |